FFCP PHASE1:Hg19::chrX:2670141..2670151,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=7499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12806 | |||
|TSSclassifier=strong | |||
|UniProt=E5RH28 | |||
|association_with_transcript=-34bp_to_ENST00000509484_5end | |||
|coexpression_cluster_id=C2028 | |||
|description=CAGE_peak_5_at_XG_5end | |||
|id=chrX:2670141..2670151,+ | |||
|ontology_enrichment_celltype=CL:0002334!2.28e-25!12;CL:1000306!5.23e-16!4;CL:0002547!5.23e-16!4;CL:0002580!4.65e-13!3;CL:0000057!2.23e-12!75;CL:0002617!5.01e-09!2;CL:0002583!7.69e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.73e-38;12!CL:0002580;1.70e-29;3!CL:1000306;1.05e-21;4!CL:0002547;1.05e-21;4!CL:0002617;9.57e-20;2!CL:0002582;9.28e-14;3!CL:0000515;9.28e-14;3!CL:0002621;9.28e-14;3!CL:0000136;8.49e-12;13!CL:0000056;1.50e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.62e-38,12;CL:0002580,1.34e-29,3;CL:1000306,9.47e-22,4;CL:0002547,9.47e-22,4;CL:0002617,9.60e-20,2;CL:0002582,6.96e-14,3;CL:0002621,9.00e-14,3;CL:0000057,4.21e-11,76;CL:0000515,2.05e-10,4;CL:0000136,3.63e-10,15 | |||
|ontology_enrichment_development_v019=CL:0000515;1.50e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!5.23e-16!4;UBERON:0007240!5.23e-16!4;UBERON:0005742!5.23e-16!4;UBERON:0005734!5.23e-16!4;UBERON:0004664!5.23e-16!4;UBERON:0004663!5.23e-16!4;UBERON:0000310!7.45e-14!10;UBERON:0001443!1.57e-12!11;UBERON:0003688!4.53e-10!6;UBERON:0002358!4.53e-10!6;UBERON:0003684!4.53e-10!6;UBERON:0001178!4.53e-10!6;UBERON:0002072!1.20e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;9.90e-24;10!UBERON:0004797;1.05e-21;4!UBERON:0000415;1.05e-21;4!UBERON:0007240;1.05e-21;4!UBERON:0005742;1.05e-21;4!UBERON:0005734;1.05e-21;4!UBERON:0004664;1.05e-21;4!UBERON:0004663;1.05e-21;4!UBERON:0001443;1.42e-21;11!UBERON:0001949;9.28e-14;3!UBERON:0002072;1.86e-08;5!UBERON:0003688;3.46e-07;6!UBERON:0002358;3.46e-07;6!UBERON:0003684;3.46e-07;6!UBERON:0001178;3.46e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,8.82e-24,10;UBERON:0000415,9.47e-22,4;UBERON:0007240,9.47e-22,4;UBERON:0005742,9.47e-22,4;UBERON:0005734,9.47e-22,4;UBERON:0004664,9.47e-22,4;UBERON:0004663,9.47e-22,4;UBERON:0001443,1.28e-21,11;UBERON:0001949,9.00e-14,3;UBERON:0004797,1.07e-12,7;UBERON:0002072,1.60e-08,5;UBERON:0003688,3.92e-07,6;UBERON:0002358,3.92e-07,6;UBERON:0003684,3.92e-07,6;UBERON:0001178,3.92e-07,6 | |||
|phase1_expression=1.81678379270557,1.07050261945492,0.140954404095971,1.0007329835313,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01304409331664,1.98613771219828,1.43418310374407,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.747243402759005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.717558542755448,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51239109112286,1.36373060295417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904760751704678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,1.48864684691266,2.60885354589706,2.24528075546459,0.128139149255701,1.53512174720011,0,0,0.462629081407967,1.9531789784444,1.88892458831761,0,2.44041794765914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,4.96228809191512,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,8.79356221798103,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@XG | |||
}} |
Revision as of 04:41, 23 January 2014
Short description: | p5@XG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_5_at_XG_5end |
Coexpression cluster: | C2028_peripheral_Preadipocyte_Adipocyte_Gingival_Smooth_leiomyoma_Fibroblast |
Association with transcript: | -34bp_to_ENST00000509484_5end |
EntrezGene: | XG |
HGNC: | 12806 |
UniProt: | E5RH28 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.62e-38 | 12 |
preadipocyte of the breast | 1.34e-29 | 3 |
fibroblast of tunica adventitia of artery | 9.47e-22 | 4 |
fibroblast of the aortic adventitia | 9.47e-22 | 4 |
adipocyte of breast | 9.60e-20 | 2 |
visceral preadipocyte | 6.96e-14 | 3 |
gingival epithelial cell | 9.00e-14 | 3 |
fibroblast | 4.21e-11 | 76 |
skeletal muscle myoblast | 2.05e-10 | 4 |
fat cell | 3.63e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
breast | 8.82e-24 | 10 |
artery wall | 9.47e-22 | 4 |
tunica adventitia of artery | 9.47e-22 | 4 |
adventitia | 9.47e-22 | 4 |
tunica adventitia of blood vessel | 9.47e-22 | 4 |
aorta tunica adventitia | 9.47e-22 | 4 |
aorta wall | 9.47e-22 | 4 |
chest | 1.28e-21 | 11 |
gingival epithelium | 9.00e-14 | 3 |
blood vessel layer | 1.07e-12 | 7 |
hypodermis | 1.60e-08 | 5 |
omentum | 3.92e-07 | 6 |
peritoneum | 3.92e-07 | 6 |
abdominal cavity | 3.92e-07 | 6 |
visceral peritoneum | 3.92e-07 | 6 |