FFCP PHASE1:Hg19::chrX:153602960..153602977,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3754 | |||
|TSSclassifier=strong | |||
|UniProt=P21333 | |||
|association_with_transcript=16bp_to_ENST00000369850_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_4_at_FLNA_5end | |||
|id=chrX:153602960..153602977,- | |||
|ontology_enrichment_celltype=CL:0000055!3.44e-14!180;CL:0000192!6.47e-09!42;CL:0000514!6.47e-09!42;CL:0000359!4.14e-08!32;CL:0000183!5.95e-07!59;CL:0000187!9.54e-07!54;CL:0000680!9.68e-07!57;CL:0000056!9.68e-07!57;CL:0000355!9.68e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.87e-08;32!CL:0000192;5.85e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.25e-09,43;CL:0000514,5.25e-09,43;CL:0000359,3.42e-08,32;CL:0000057,7.03e-07,76;CL:0000187,9.97e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;5.85e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.42e-11!84;UBERON:0001009!3.75e-11!113;UBERON:0003914!7.30e-11!118;UBERON:0004535!8.23e-11!110;UBERON:0001981!1.97e-10!60;UBERON:0007500!1.97e-10!60;UBERON:0004537!1.97e-10!60;UBERON:0006965!1.97e-10!60;UBERON:0001637!4.82e-10!42;UBERON:0003509!4.82e-10!42;UBERON:0004572!4.82e-10!42;UBERON:0002049!3.23e-09!79;UBERON:0007798!3.23e-09!79;UBERON:0003104!4.38e-09!238;UBERON:0009142!4.38e-09!238;UBERON:0005256!5.12e-09!143;UBERON:0002100!9.38e-09!216;UBERON:0000055!1.53e-08!69;UBERON:0002385!1.05e-07!63;UBERON:0001015!1.05e-07!63;UBERON:0000383!1.05e-07!63;UBERON:0000468!1.42e-07!659;UBERON:0004573!2.08e-07!33;UBERON:0004571!2.08e-07!33;UBERON:0000490!3.36e-07!138;UBERON:0001134!6.62e-07!61;UBERON:0002036!6.62e-07!61;UBERON:0003082!6.62e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.08e-07;42!UBERON:0003509;1.08e-07;42!UBERON:0004572;1.08e-07;42!UBERON:0004573;5.96e-07;33!UBERON:0004571;5.96e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.07e-11,83;UBERON:0003914,4.14e-11,117;UBERON:0001009,8.66e-11,112;UBERON:0004535,1.90e-10,109;UBERON:0001637,3.77e-10,42;UBERON:0003509,3.77e-10,42;UBERON:0004572,3.77e-10,42;UBERON:0007500,4.69e-10,59;UBERON:0001981,4.69e-10,59;UBERON:0004537,4.69e-10,59;UBERON:0006965,4.69e-10,59;UBERON:0003104,3.67e-09,160;UBERON:0009142,3.67e-09,160;UBERON:0002100,4.46e-09,199;UBERON:0002049,8.09e-09,78;UBERON:0007798,8.09e-09,78;UBERON:0005256,2.40e-08,122;UBERON:0000055,5.23e-08,68;UBERON:0002385,1.07e-07,64;UBERON:0001015,1.07e-07,64;UBERON:0000383,1.07e-07,64;UBERON:0004573,1.76e-07,33;UBERON:0004571,1.76e-07,33;UBERON:0007503,5.06e-07,78;UBERON:0000490,5.37e-07,148;UBERON:0001134,6.76e-07,62;UBERON:0002036,6.76e-07,62;UBERON:0003082,6.76e-07,62 | |||
|phase1_expression=29.6135758211007,41.1073005870688,58.9189409121159,56.041047077753,71.9607362027933,54.9573270183232,60.7919707603945,3.79031924056099,0.522371256399677,30.9624759991901,50.2416840940148,3.9319446983431,8.17677632508206,0.866364470720326,0.662794751455832,12.7741777825837,19.2862248967673,16.0668219885222,11.7103871709722,8.61847406537515,7.34402488479311,43.5702062854542,20.8952270605671,16.1511821586003,28.623721827615,3.59143007015371,3.7766271146975,3.46327437780189,7.08055698328027,19.9591287010551,2.78669021968937,5.51652734687356,4.819294700452,1.47901604066715,0,0,0,3.32397245119126,5.81578897663411,2.60413044859022,0.223915474239924,0,0,1.01778767145695,0,0.970336244751265,0.929716147622738,0.411167888021826,0.929119112685311,0.575384784644301,0.256160706529101,0,2.75796544589295,0,0,2.63539275359647,0.545812300115692,0.224723484445085,4.59125838556354,0.320929027076094,1.27867425159808,0.329851300186716,0.199463657621632,0,2.03146467040009,0,0,1.7587406567972,0,0.434377689410233,4.23779651843358,0.368277635987565,0,0.211255286311942,0.212604299965044,0.209658645508376,0.561643155732475,0.600707571366025,0.32145117339416,0.285012743741249,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0,0,0.764546456250458,0,0.560508562981536,0.526768169550154,0.786839080455332,3.14408610199332,3.70082698199117,2.84217042164153,0.977766799900771,0,0,5.79334375802903,2.06224135232386,0.664601683750863,0.812411591295047,8.32593578216889,8.19373889627233,3.4531959966772,3.86890024900188,3.76744011455568,0.296573126324121,0,0,9.17805675850286,1.14966148080576,1.03088233644789,2.53019692019503,3.18565414324097,2.60433381542567,4.75226022224187,4.81840381048873,3.32765189001488,4.99722906209383,3.31488152861624,2.46338399076314,6.04820229674197,13.3720097891754,6.80674698249155,2.43806866313962,2.68280343881454,19.8186970857472,22.7706666002277,37.6003432976917,13.6155727823174,3.9764297352555,9.24606253575008,15.5037100149071,25.7206101056574,17.8304614957046,43.6815216784872,10.2002680721912,11.4943177263173,17.5255592573529,17.4129737299267,16.0879132227827,0,0,0,15.1059429598696,13.763753521698,11.108496051443,14.6980064900242,16.3604780121863,14.3061381808835,19.2275369213866,3.10100111003195,0.71153252537342,4.68608857870538,3.62546385398232,5.32190474002959,7.56592378399325,1.10298924103761,13.7724131139899,1.25019619597712,1.79623498100936,1.57656072676651,6.13266549863533,7.59412527654503,3.66403487860815,2.63560834872127,3.87780264148325,9.59406914713576,55.6608585898757,22.1603395413015,17.0807843249052,8.89193524321323,9.22137793715728,39.8081096101038,119.55887521727,47.1135017476775,2.48968828319813,7.40908696383284,4.57693328717684,5.75158225050739,1.72852777344,2.81185718200556,0.312160076830321,3.99330275081114,2.24173020827702,0.469737994575059,1.94247533241758,2.24721290723598,1.02077085627447,1.84251475967652,1.65321249881225,60.5881457213847,102.121241792044,1.82032272387605,28.7447256726495,2.86171393721913,1.87677779807946,0.831192346452549,42.1418516045604,72.9440954001667,94.3495009933428,15.8805056424029,47.0000845504818,58.728281925106,51.287520080614,36.6111137222971,18.6525077921574,41.4801269473463,39.6428903986286,25.8227788329137,27.6721094657804,50.4867548488229,50.6274442532646,11.153577920498,56.4465252101417,34.2557133973977,45.2726781469002,2.12586938479627,1.63647672354501,2.29443676311203,0.243947412259191,1.06023814657188,0.929551542956147,1.7622379352613,2.52320850875628,0,53.1928409921374,46.9565884880806,24.8642858434465,3.71494342425583,2.16563844500876,13.605282004582,16.0155455574197,10.8454963447567,15.7720381007323,18.9555116360393,13.5244252893325,11.0561672691335,12.1657308377715,10.0034260806062,2.21446636387394,35.0604434508615,26.3407367252096,57.3333974403614,0,0,0.590789906681404,0,1.35287282397425,4.63233087806019,6.47526683910891,8.99214026060957,7.94178882051884,3.98130314181677,5.53874119027552,0,11.5465073620219,3.59384255422738,47.433112471272,3.75352764178792,2.77791307545966,1.52203321787679,3.95102198979638,2.57545848628462,0.738651018262192,20.1243668019744,8.02608276359133,2.81201501960331,8.90305279453955,3.1190521393325,3.58234090811393,4.65014301622339,23.3863434290779,0,0.264145302039678,1.4512968087854,0,0.37872730027914,2.79390734885544,7.63976851116555,15.2382681373061,11.9750712215894,5.55268460597947,8.40960561962969,3.42991719156694,2.91540819297938,0.43596006883328,2.6401782895542,32.57647237096,25.0359512096318,0.845302752556,93.8761551544593,52.003718455683,2.05765899409714,4.25547396069835,3.46348832720929,26.7368848140736,1.62786481617433,7.40916303102692,1.62868092146868,28.0759639506611,3.16780749173372,7.23454504943007,16.5591357134056,17.2953274744959,0,0.502257091432126,4.21667878966063,55.3533416185556,112.564697117432,9.98458335285029,7.09428402671138,3.49309748335652,8.41586527227509,5.82842748766342,9.65450724989443,19.190854162497,11.8075593377368,4.8277978602268,3.90419561572865,6.18631050222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| |||
|short_description=p4@FLNA | |||
}} |
Revision as of 07:31, 23 January 2014
Short description: | p4@FLNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FLNA_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 16bp_to_ENST00000369850_5end |
EntrezGene: | FLNA |
HGNC: | 3754 |
UniProt: | P21333 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.25e-09 | 43 |
smooth muscle myoblast | 5.25e-09 | 43 |
vascular associated smooth muscle cell | 3.42e-08 | 32 |
fibroblast | 7.03e-07 | 76 |
muscle cell | 9.97e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 3.07e-11 | 83 |
epithelial tube | 4.14e-11 | 117 |
circulatory system | 8.66e-11 | 112 |
cardiovascular system | 1.90e-10 | 109 |
artery | 3.77e-10 | 42 |
arterial blood vessel | 3.77e-10 | 42 |
arterial system | 3.77e-10 | 42 |
epithelial tube open at both ends | 4.69e-10 | 59 |
blood vessel | 4.69e-10 | 59 |
blood vasculature | 4.69e-10 | 59 |
vascular cord | 4.69e-10 | 59 |
mesenchyme | 3.67e-09 | 160 |
entire embryonic mesenchyme | 3.67e-09 | 160 |
trunk | 4.46e-09 | 199 |
vasculature | 8.09e-09 | 78 |
vascular system | 8.09e-09 | 78 |
trunk mesenchyme | 2.40e-08 | 122 |
vessel | 5.23e-08 | 68 |
muscle tissue | 1.07e-07 | 64 |
musculature | 1.07e-07 | 64 |
musculature of body | 1.07e-07 | 64 |
systemic artery | 1.76e-07 | 33 |
systemic arterial system | 1.76e-07 | 33 |
epithelial vesicle | 5.06e-07 | 78 |
unilaminar epithelium | 5.37e-07 | 148 |
skeletal muscle tissue | 6.76e-07 | 62 |
striated muscle tissue | 6.76e-07 | 62 |
myotome | 6.76e-07 | 62 |