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{{CL
{{CL
|id=CL:0002170
|alt_id=
|name=keratinized cell of the oral mucosa
|namespace=cell
|def="A keratinized cell located in the hard palate or gingiva." [GOC:tfm, PMID:12014572]
|xref=
|is_a=CL:0000237;;CL:0002336
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-08-26T02:51:30Z
|def="A keratinized cell located in the hard palate or gingiva." [GOC:tfm, PMID:12014572]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002170
|is_a=CL:0000237 ;;CL:0002251 ;;CL:0002336
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=keratinized cell of the oral mucosa
|namespace=cell
|obo_creation_date=2010-08-26T02:51:30Z
|part_of=UBERON:0003729
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:25, 12 September 2014

Name:keratinized cell of the oral mucosa
Namespace:cell
Definition:"A keratinized cell located in the hard palate or gingiva." [GOC:tfm, PMID:12014572]
Created by:tmeehan
Creation date:2010-08-26T02:51:30Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000237(keratinizing barrier epithelial cell),CL:0002251(epithelial cell of alimentary canal),CL:0002336(buccal mucosa cell)
part_of:UBERON:0003729(mouth mucosa)



Children


derives from:FF:0000083 (human oral mucosa keratinocyte sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002170 (keratinized cell of the oral mucosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.37e-99FFCP PHASE1:Hg19::chr6:107568782..107568784,-#_ce69272689b3385ba4c390cb68f03b2cp@chr6:107568782..107568784, -
9.37e-99FFCP PHASE2:Hg19::chr6:107568782..107568784,-#_ce69272689b3385ba4c390cb68f03b2cp@chr6:107568782..107568784, -
9.37e-99FFCP PHASE1:Hg19::chr7:44302954..44302996,-#_ce69272689b3385ba4c390cb68f03b2cp@chr7:44302954..44302996, -
9.37e-99FFCP PHASE2:Hg19::chr7:44302954..44302996,-#_ce69272689b3385ba4c390cb68f03b2cp@chr7:44302954..44302996, -
2.55e-98FFCP PHASE2:Hg19::chr6:56483677..56483688,-#_197cf59ed7dfdd64dd8bab1c7bc584fbp138@DST
2.55e-98FFCP PHASE1:Hg19::chr6:56483677..56483688,-#_197cf59ed7dfdd64dd8bab1c7bc584fbp138@DST
2.39e-66FFCP PHASE1:Hg19::chr4:44963669..44963674,+#_7bc2c01a4163022a475eae4b6a7e9181p@chr4:44963669..44963674, +
2.39e-66FFCP PHASE2:Hg19::chr4:44963669..44963674,+#_7bc2c01a4163022a475eae4b6a7e9181p@chr4:44963669..44963674, +
1.46e-50FFCP PHASE1:Hg19::chr16:3041330..3041336,+#_890f93db5ef218ce664c8d9f7719eff2p@chr16:3041330..3041336, +
1.46e-50FFCP PHASE2:Hg19::chr16:3041330..3041336,+#_890f93db5ef218ce664c8d9f7719eff2p@chr16:3041330..3041336, +
9.99e-30FFCP PHASE1:Hg19::chr6:56483141..56483154,-#_9780f06bc5c4ee6f226c8319d07e473dp@chr6:56483141..56483154, -
9.99e-30FFCP PHASE2:Hg19::chr6:56483141..56483154,-#_9780f06bc5c4ee6f226c8319d07e473dp@chr6:56483141..56483154, -
9.99e-30FFCP PHASE1:Hg19::chr5:167247779..167247789,+#_9780f06bc5c4ee6f226c8319d07e473dp20@ODZ2
9.99e-30FFCP PHASE2:Hg19::chr5:167247779..167247789,+#_9780f06bc5c4ee6f226c8319d07e473dp20@ODZ2
1.78e-29FFCP PHASE2:Hg19::chr8:130798890..130798901,-#_afec93d2b007e32e77ad6864d78f19e8p3@GSDMC
1.78e-29FFCP PHASE1:Hg19::chr8:130798890..130798901,-#_afec93d2b007e32e77ad6864d78f19e8p3@GSDMC
3.16e-29FFCP PHASE2:Hg19::chr3:17780966..17780986,-#_47b1b7d793fa1cae6e26d5acea5d18ebp11@TBC1D5
3.16e-29FFCP PHASE2:Hg19::chr2:227008823..227008831,-#_47b1b7d793fa1cae6e26d5acea5d18ebp@chr2:227008823..227008831, -
3.16e-29FFCP PHASE1:Hg19::chr3:17780966..17780986,-#_47b1b7d793fa1cae6e26d5acea5d18ebp11@TBC1D5
3.16e-29FFCP PHASE1:Hg19::chr2:227008823..227008831,-#_47b1b7d793fa1cae6e26d5acea5d18ebp@chr2:227008823..227008831, -
4.2e-29FFCP PHASE1:Hg19::chrX:150707031..150707048,-#_016dc9227c3b062d23dd37e8df6b4b1fp@chrX:150707031..150707048, -
4.2e-29FFCP PHASE2:Hg19::chrX:150707031..150707048,-#_016dc9227c3b062d23dd37e8df6b4b1fp@chrX:150707031..150707048, -
3.58e-26FFCP PHASE2:Hg19::chr9:113801505..113801517,-#_6660c5312be7688cfce5ec056dc3882fp36@LPAR1
3.58e-26FFCP PHASE1:Hg19::chr9:113801505..113801517,-#_6660c5312be7688cfce5ec056dc3882fp36@LPAR1
7.62e-26FFCP PHASE1:Hg19::chr2:19428508..19428522,-#_e24c409d3801cb3efb731ed0636f9637p@chr2:19428508..19428522, -
7.62e-26FFCP PHASE2:Hg19::chr2:19428508..19428522,-#_e24c409d3801cb3efb731ed0636f9637p@chr2:19428508..19428522, -
9.79e-26FFCP PHASE1:Hg19::chr11:8795787..8795804,-#_2c880528f3f35dd772fca1f57656ed08p26@ST5
9.79e-26FFCP PHASE2:Hg19::chr11:8795787..8795804,-#_2c880528f3f35dd772fca1f57656ed08p26@ST5
1.34e-23FFCP PHASE1:Hg19::chr15:42239202..42239230,-#_2a41725a0e5794ef106fd7c5ee1a7833p@chr15:42239202..42239230, -
1.34e-23FFCP PHASE1:Hg19::chr12:52911408..52911421,+#_2a41725a0e5794ef106fd7c5ee1a7833p@chr12:52911408..52911421, +
1.34e-23FFCP PHASE2:Hg19::chr15:42239202..42239230,-#_2a41725a0e5794ef106fd7c5ee1a7833p@chr15:42239202..42239230, -
1.34e-23FFCP PHASE2:Hg19::chr12:52911408..52911421,+#_2a41725a0e5794ef106fd7c5ee1a7833p@chr12:52911408..52911421, +
2.1e-23FFCP PHASE1:Hg19::chr18:9538358..9538360,+#_bad6dbed97c4c7d20ba5de6e4004a816p@chr18:9538358..9538360, +
2.1e-23FFCP PHASE2:Hg19::chr16:82671490..82671521,+#_bad6dbed97c4c7d20ba5de6e4004a816p@chr16:82671490..82671521, +
2.1e-23FFCP PHASE2:Hg19::chr18:9538358..9538360,+#_bad6dbed97c4c7d20ba5de6e4004a816p@chr18:9538358..9538360, +
2.1e-23FFCP PHASE1:Hg19::chr16:82671490..82671521,+#_bad6dbed97c4c7d20ba5de6e4004a816p@chr16:82671490..82671521, +
2.62e-23FFCP PHASE1:Hg19::chr3:38017384..38017388,+#_e446c7b6d35370d0c793780dc27fdd61p@chr3:38017384..38017388, +
2.62e-23FFCP PHASE2:Hg19::chr3:38017384..38017388,+#_e446c7b6d35370d0c793780dc27fdd61p@chr3:38017384..38017388, +
2.62e-23FFCP PHASE1:Hg19::chr15:76443020..76443024,-#_e446c7b6d35370d0c793780dc27fdd61p@chr15:76443020..76443024, -
2.62e-23FFCP PHASE2:Hg19::chr15:76443020..76443024,-#_e446c7b6d35370d0c793780dc27fdd61p@chr15:76443020..76443024, -
6.4e-23FFCP PHASE1:Hg19::chr13:43059605..43059611,+#_06e430958a9d945bebf17f9ba273c287p@chr13:43059605..43059611, +
6.4e-23FFCP PHASE2:Hg19::chr13:43059605..43059611,+#_06e430958a9d945bebf17f9ba273c287p@chr13:43059605..43059611, +
6.4e-23FFCP PHASE1:Hg19::chr1:236247199..236247215,-#_06e430958a9d945bebf17f9ba273c287p@chr1:236247199..236247215, -
6.4e-23FFCP PHASE2:Hg19::chr1:236247199..236247215,-#_06e430958a9d945bebf17f9ba273c287p@chr1:236247199..236247215, -
2.82e-21FFCP PHASE1:Hg19::chr6:56484743..56484754,-#_89cc93b9463f6b829c3bda76c859e228p@chr6:56484743..56484754, -
2.82e-21FFCP PHASE2:Hg19::chr6:56484743..56484754,-#_89cc93b9463f6b829c3bda76c859e228p@chr6:56484743..56484754, -
3.45e-21FFCP PHASE1:Hg19::chr1:94240846..94240855,-#_77f8b4b7e0f73339aab07ac6b1819ce4p5@uc001dqd.1
3.45e-21FFCP PHASE2:Hg19::chr1:94240846..94240855,-#_77f8b4b7e0f73339aab07ac6b1819ce4p5@uc001dqd.1
4.22e-21FFCP PHASE1:Hg19::chr12:98739159..98739191,-#_80a4a3c5bfcb1b5f7b74e24cc0d9b8e4p@chr12:98739159..98739191, -
4.22e-21FFCP PHASE2:Hg19::chr12:98739159..98739191,-#_80a4a3c5bfcb1b5f7b74e24cc0d9b8e4p@chr12:98739159..98739191, -
4.22e-21FFCP PHASE1:Hg19::chr12:28125967..28125978,-#_80a4a3c5bfcb1b5f7b74e24cc0d9b8e4p16@PTHLH
4.22e-21FFCP PHASE2:Hg19::chr12:28125967..28125978,-#_80a4a3c5bfcb1b5f7b74e24cc0d9b8e4p16@PTHLH
1.88e-19FFCP PHASE2:Hg19::chr5:167247865..167247872,+#_73ddc070b4636d533c53dca38dbc452cp23@ODZ2
1.88e-19FFCP PHASE1:Hg19::chr5:167247865..167247872,+#_73ddc070b4636d533c53dca38dbc452cp23@ODZ2
2.25e-19FFCP PHASE1:Hg19::chr17:7951995..7952006,+#_3ec7307d16048f1f956238bbb7f3a436p@chr17:7951995..7952006, +
2.25e-19FFCP PHASE1:Hg19::chr6:56485258..56485269,-#_3ec7307d16048f1f956238bbb7f3a436p@chr6:56485258..56485269, -
2.25e-19FFCP PHASE2:Hg19::chr6:56485258..56485269,-#_3ec7307d16048f1f956238bbb7f3a436p@chr6:56485258..56485269, -
2.25e-19FFCP PHASE2:Hg19::chr17:7951995..7952006,+#_3ec7307d16048f1f956238bbb7f3a436p@chr17:7951995..7952006, +
3.25e-19FFCP PHASE1:Hg19::chr14:51955760..51955769,+#_dbaa31f0e3a67f73754b2727da8ecb32p29@FRMD6
3.25e-19FFCP PHASE2:Hg19::chr14:51955760..51955769,+#_dbaa31f0e3a67f73754b2727da8ecb32p29@FRMD6
5.62e-19FFCP PHASE1:Hg19::chr1:183212642..183212654,+#_7205043a90e9440299e7758b188873e5p@chr1:183212642..183212654, +
5.62e-19FFCP PHASE1:Hg19::chr14:85799279..85799283,+#_7205043a90e9440299e7758b188873e5p@chr14:85799279..85799283, +
5.62e-19FFCP PHASE2:Hg19::chr1:183212642..183212654,+#_7205043a90e9440299e7758b188873e5p@chr1:183212642..183212654, +
5.62e-19FFCP PHASE2:Hg19::chr14:85799279..85799283,+#_7205043a90e9440299e7758b188873e5p@chr14:85799279..85799283, +
2.66e-18FFCP PHASE1:Hg19::chr6:56484963..56484989,+#_8bf7d8ed8157dfcfae2275e895ad8558p@chr6:56484963..56484989, +
2.66e-18FFCP PHASE2:Hg19::chr6:56484963..56484989,+#_8bf7d8ed8157dfcfae2275e895ad8558p@chr6:56484963..56484989, +
1.03e-17FFCP PHASE1:Hg19::chr11:64110458..64110478,+#_3ae5624a8ed3778d1d535326c37eedb1p@chr11:64110458..64110478, +
1.03e-17FFCP PHASE2:Hg19::chr11:64110458..64110478,+#_3ae5624a8ed3778d1d535326c37eedb1p@chr11:64110458..64110478, +
1.22e-17FFCP PHASE1:Hg19::chr13:43451842..43451845,+#_9211988581ca7a38fc4d58f7b7e2e559p@chr13:43451842..43451845, +
1.22e-17FFCP PHASE2:Hg19::chr13:43451842..43451845,+#_9211988581ca7a38fc4d58f7b7e2e559p@chr13:43451842..43451845, +
1.22e-17FFCP PHASE1:Hg19::chr12:28125953..28125964,-#_9211988581ca7a38fc4d58f7b7e2e559p17@PTHLH
1.22e-17FFCP PHASE2:Hg19::chr12:28125953..28125964,-#_9211988581ca7a38fc4d58f7b7e2e559p17@PTHLH
1.44e-17FFCP PHASE1:Hg19::chr18:21479368..21479399,-#_838fbccf0c53022384205662709929dep@chr18:21479368..21479399, -
1.44e-17FFCP PHASE2:Hg19::chr18:21479368..21479399,-#_838fbccf0c53022384205662709929dep@chr18:21479368..21479399, -
1.7e-17FFCP PHASE1:Hg19::chr11:2022489..2022501,-#_2322f9c95d7847901a2cd3eb16fa7a12p37@H19
1.7e-17FFCP PHASE2:Hg19::chr11:2022489..2022501,-#_2322f9c95d7847901a2cd3eb16fa7a12p37@H19
5.53e-17FFCP PHASE1:Hg19::chr12:52908434..52908443,-#_c786231960bd371d8229326ce98a5d59p@chr12:52908434..52908443, -
5.53e-17FFCP PHASE2:Hg19::chr12:52908434..52908443,-#_c786231960bd371d8229326ce98a5d59p@chr12:52908434..52908443, -
6.47e-17FFCP PHASE1:Hg19::chr6:56480719..56480734,-#_5d1d75cc775fd12b82e1a3e728465f3ep@chr6:56480719..56480734, -
6.47e-17FFCP PHASE2:Hg19::chr6:56480719..56480734,-#_5d1d75cc775fd12b82e1a3e728465f3ep@chr6:56480719..56480734, -
8.86e-17FFCP PHASE1:Hg19::chr15:52313600..52313611,+#_aa49b92beed8d232327244d42e58da5dp12@MAPK6
8.86e-17FFCP PHASE2:Hg19::chr15:52313600..52313611,+#_aa49b92beed8d232327244d42e58da5dp12@MAPK6
1.41e-16FFCP PHASE1:Hg19::chr6:56483497..56483514,-#_db99ed5d060444b3255dc69fce835a45p84@DST
1.41e-16FFCP PHASE2:Hg19::chr6:56483497..56483514,-#_db99ed5d060444b3255dc69fce835a45p84@DST
1.93e-16FFCP PHASE1:Hg19::chr16:3041159..3041167,+#_e238e551d92a37bbf0cfec9c18e40bfdp@chr16:3041159..3041167, +
1.93e-16FFCP PHASE2:Hg19::chr16:3041159..3041167,+#_e238e551d92a37bbf0cfec9c18e40bfdp@chr16:3041159..3041167, +
1.93e-16FFCP PHASE1:Hg19::chr10:120261556..120261561,+#_e238e551d92a37bbf0cfec9c18e40bfdp@chr10:120261556..120261561, +
1.93e-16FFCP PHASE2:Hg19::chr10:120261556..120261561,+#_e238e551d92a37bbf0cfec9c18e40bfdp@chr10:120261556..120261561, +
6.44e-16FFCP PHASE1:Hg19::chr6:56484382..56484393,-#_da03b782fbba5b434bf888cf99ba6574p76@DST
6.44e-16FFCP PHASE2:Hg19::chr6:56484382..56484393,-#_da03b782fbba5b434bf888cf99ba6574p76@DST
9.99e-16FFCP PHASE1:Hg19::chr2:26492664..26492712,+#_4fd5813ff5dc0406e29a392a59e66278p8@HADHB
9.99e-16FFCP PHASE2:Hg19::chr2:26492664..26492712,+#_4fd5813ff5dc0406e29a392a59e66278p8@HADHB
1.16e-15FFCP PHASE2:Hg19::chr18:61171128..61171130,+#_633e87c98bf1af4eec49da18121a93b9p@chr18:61171128..61171130, +
1.16e-15FFCP PHASE1:Hg19::chr18:61171128..61171130,+#_633e87c98bf1af4eec49da18121a93b9p@chr18:61171128..61171130, +
2.06e-15FFCP PHASE1:Hg19::chr18:9617195..9617198,-#_c6651f6df5f721f0b39bb825a7230137p@chr18:9617195..9617198, -
2.06e-15FFCP PHASE2:Hg19::chr18:9617195..9617198,-#_c6651f6df5f721f0b39bb825a7230137p@chr18:9617195..9617198, -
2.38e-15FFCP PHASE1:Hg19::chr4:89514516..89514528,+#_048e6177f428c6bc48ac6c9e493f1a3fp7@HERC3
2.38e-15FFCP PHASE1:Hg19::chr18:12288270..12288282,+#_048e6177f428c6bc48ac6c9e493f1a3fp@chr18:12288270..12288282, +
2.38e-15FFCP PHASE2:Hg19::chr4:89514516..89514528,+#_048e6177f428c6bc48ac6c9e493f1a3fp7@HERC3
2.38e-15FFCP PHASE2:Hg19::chr18:12288270..12288282,+#_048e6177f428c6bc48ac6c9e493f1a3fp@chr18:12288270..12288282, +

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