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{{CL
{{CL
|id=CL:0002554
|alt_id=
|name=fibroblast of lymphatic vessel
|namespace=cell
|def="A fibroblast of the lymphatic system." [GOC:tfm]
|xref=
|is_a=CL:0000057
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-02-28T05:16:18Z
|def="A fibroblast of the lymphatic system." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002554
|is_a=CL:0000057
|is_obsolete=
|located_in=
|located_in=
|name=fibroblast of lymphatic vessel
|namespace=cell
|obo_creation_date=2011-02-28T05:16:18Z
|part_of=UBERON:0001473
|part_of=UBERON:0001473
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:28, 12 September 2014

Name:fibroblast of lymphatic vessel
Namespace:cell
Definition:"A fibroblast of the lymphatic system." [GOC:tfm]
Created by:tmeehan
Creation date:2011-02-28T05:16:18Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000057(fibroblast)
part_of:UBERON:0001473(lymphatic vessel)



Children


is a:FF:0000110 (mouse fibroblast of lymphatic vessel)
derives from:FF:0000065 (human fibroblast of lymphatic vessel sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002554 (fibroblast of lymphatic vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.11e-50FFCP PHASE2:Hg19::chr6:155635818..155635834,-#_6fcca9a2626c0a29c140b058c4771114p4@TFB1M
3.11e-50FFCP PHASE1:Hg19::chr6:155635818..155635834,-#_6fcca9a2626c0a29c140b058c4771114p4@TFB1M
3.94e-37FFCP PHASE2:Hg19::chr11:46321160..46321164,+#_9c9de607bb0fc4fe1a675f45f6220e53p@chr11:46321160..46321164, +
3.94e-37FFCP PHASE1:Hg19::chr11:46321160..46321164,+#_9c9de607bb0fc4fe1a675f45f6220e53p@chr11:46321160..46321164, +
6.83e-37FFCP PHASE1:Hg19::chr13:94958004..94958025,+#_ca19a2f4bfb39c55cb211e7d2dcfb160p@chr13:94958004..94958025, +
6.83e-37FFCP PHASE2:Hg19::chr13:94958004..94958025,+#_ca19a2f4bfb39c55cb211e7d2dcfb160p@chr13:94958004..94958025, +
5.04e-34FFCP PHASE2:Hg19::chr17:7414798..7414809,+#_fc95e4c4c73f35e1e775bc11ebec5a6cp@chr17:7414798..7414809, +
5.04e-34FFCP PHASE1:Hg19::chr17:7414798..7414809,+#_fc95e4c4c73f35e1e775bc11ebec5a6cp@chr17:7414798..7414809, +
6.27e-32FFCP PHASE1:Hg19::chr15:35731807..35731812,+#_2c94cf2b3c1d4ffdfccba2cb9a286df2p@chr15:35731807..35731812, +
6.27e-32FFCP PHASE2:Hg19::chr15:35731807..35731812,+#_2c94cf2b3c1d4ffdfccba2cb9a286df2p@chr15:35731807..35731812, +
5.56e-26FFCP PHASE1:Hg19::chr12:48147711..48147719,+#_67ef61157e69315181c317c8194c4ad1p19@SLC48A1
5.56e-26FFCP PHASE2:Hg19::chr12:48147711..48147719,+#_67ef61157e69315181c317c8194c4ad1p19@SLC48A1
4.66e-21FFCP PHASE2:Hg19::chr7:47622108..47622117,-#_44a8a0d694fd4616280b3673b67e9eccp33@TNS3
4.66e-21FFCP PHASE1:Hg19::chr7:47622108..47622117,-#_44a8a0d694fd4616280b3673b67e9eccp33@TNS3
5.7e-21FFCP PHASE2:Hg19::chr3:44771012..44771024,-#_a77617d9eb7258938b27dec56b7421dbp@chr3:44771012..44771024, -
5.7e-21FFCP PHASE1:Hg19::chr3:44771012..44771024,-#_a77617d9eb7258938b27dec56b7421dbp@chr3:44771012..44771024, -
2.05e-20FFCP PHASE1:Hg19::chr3:170459156..170459176,-#_aeda7307c5f60ecc70d6fc682573046fp3@ENST00000473110
2.05e-20FFCP PHASE2:Hg19::chr3:170459156..170459176,-#_aeda7307c5f60ecc70d6fc682573046fp3@ENST00000473110
1.8e-19FFCP PHASE2:Hg19::chr3:170459205..170459216,-#_40c841a34f081556ed8f2ea7ecd08d3cp2@ENST00000473110
1.8e-19FFCP PHASE1:Hg19::chr3:170459205..170459216,-#_40c841a34f081556ed8f2ea7ecd08d3cp2@ENST00000473110
9.18e-19FFCP PHASE1:Hg19::chr5:167070346..167070350,+#_6d829add80c6b688805e46db18deda3bp@chr5:167070346..167070350, +
9.18e-19FFCP PHASE2:Hg19::chr5:167070346..167070350,+#_6d829add80c6b688805e46db18deda3bp@chr5:167070346..167070350, +
6.48e-18FFCP PHASE1:Hg19::chr12:57623787..57623800,+#_58677c6b4d1b2abc375637eacc734bb6p27@SHMT2
6.48e-18FFCP PHASE2:Hg19::chr12:57623787..57623800,+#_58677c6b4d1b2abc375637eacc734bb6p27@SHMT2
7.67e-18FFCP PHASE1:Hg19::chr10:44340825..44340831,+#_3d13023420b706ba88f7e688ae59e080p2@C10orf136
7.67e-18FFCP PHASE2:Hg19::chr10:44340825..44340831,+#_3d13023420b706ba88f7e688ae59e080p2@C10orf136
2.25e-17FFCP PHASE1:Hg19::chr5:76115392..76115407,-#_54c19936bd411f2f3cf2035c90ea07d6p@chr5:76115392..76115407, -
2.25e-17FFCP PHASE2:Hg19::chr5:76115392..76115407,-#_54c19936bd411f2f3cf2035c90ea07d6p@chr5:76115392..76115407, -
2.44e-17FFCP PHASE2:Hg19::chr6:31763634..31763645,-#_7dff3fe7b5f55eb5d37e646cfabceb23p11@VARS
2.44e-17FFCP PHASE1:Hg19::chr6:31763634..31763645,-#_7dff3fe7b5f55eb5d37e646cfabceb23p11@VARS
2.03e-16FFCP PHASE1:Hg19::chr11:15145622..15145653,+#_1c76525cddded91a1dc939c0fd341feep@chr11:15145622..15145653, +
2.03e-16FFCP PHASE2:Hg19::chr11:15145622..15145653,+#_1c76525cddded91a1dc939c0fd341feep@chr11:15145622..15145653, +
1.54e-15FFCP PHASE1:Hg19::chr7:45025647..45025665,-#_3e53df68af3ede6a32fe090877f58404p@chr7:45025647..45025665, -
1.54e-15FFCP PHASE2:Hg19::chr7:45025647..45025665,-#_3e53df68af3ede6a32fe090877f58404p@chr7:45025647..45025665, -
1.78e-15FFCP PHASE2:Hg19::chr18:66451542..66451549,-#_5113f946015d90844f1a17aa4081c27dp@chr18:66451542..66451549, -
1.78e-15FFCP PHASE2:Hg19::chr1:228270912..228270924,+#_5113f946015d90844f1a17aa4081c27dp29@ARF1
1.78e-15FFCP PHASE1:Hg19::chr18:66451542..66451549,-#_5113f946015d90844f1a17aa4081c27dp@chr18:66451542..66451549, -
1.78e-15FFCP PHASE2:Hg19::chr7:72993033..72993041,-#_5113f946015d90844f1a17aa4081c27dp3@TBL2
1.78e-15FFCP PHASE1:Hg19::chr1:228270912..228270924,+#_5113f946015d90844f1a17aa4081c27dp29@ARF1
1.78e-15FFCP PHASE1:Hg19::chr7:72993033..72993041,-#_5113f946015d90844f1a17aa4081c27dp3@TBL2
2.05e-15FFCP PHASE2:Hg19::chr2:204672850..204672854,-#_702dc5e0bfafbfef007260b90ea73248p@chr2:204672850..204672854, -
2.05e-15FFCP PHASE1:Hg19::chr2:204672850..204672854,-#_702dc5e0bfafbfef007260b90ea73248p@chr2:204672850..204672854, -
3.22e-15FFCP PHASE1:Hg19::chr5:141825669..141825676,-#_2d99578b2aac98070d3a56eae5b0a61dp@chr5:141825669..141825676, -
3.22e-15FFCP PHASE2:Hg19::chr5:141825669..141825676,-#_2d99578b2aac98070d3a56eae5b0a61dp@chr5:141825669..141825676, -
1.57e-14FFCP PHASE2:Hg19::chr17:46670037..46670060,-#_ba6c73982a96ebb3c219f0127be8e34ep3@HOXB5
1.57e-14FFCP PHASE1:Hg19::chr17:46670037..46670060,-#_ba6c73982a96ebb3c219f0127be8e34ep3@HOXB5
1.89e-14FFCP PHASE2:Hg19::chr2:238334021..238334052,-#_6b627a02a6f78dc0fb5ab8b13bdcba44p1@ENST00000409162
1.89e-14FFCP PHASE1:Hg19::chr2:238334021..238334052,-#_6b627a02a6f78dc0fb5ab8b13bdcba44p1@ENST00000409162
7.3e-14FFCP PHASE1:Hg19::chr17:7415524..7415538,+#_84a5b7a9bc4b890481c8bc4c25262fd8p@chr17:7415524..7415538, +
7.3e-14FFCP PHASE1:Hg19::chr5:142000713..142000743,-#_84a5b7a9bc4b890481c8bc4c25262fd8p@chr5:142000713..142000743, -
7.3e-14FFCP PHASE2:Hg19::chr5:142000713..142000743,-#_84a5b7a9bc4b890481c8bc4c25262fd8p@chr5:142000713..142000743, -
7.3e-14FFCP PHASE2:Hg19::chr17:7415524..7415538,+#_84a5b7a9bc4b890481c8bc4c25262fd8p@chr17:7415524..7415538, +
1.21e-13FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_188eeba07897d1f4766f2a5be77ee428p4@NKX3-2
1.21e-13FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_188eeba07897d1f4766f2a5be77ee428p4@NKX3-2
1.37e-13FFCP PHASE2:Hg19::chr6:109761883..109761892,+#_e7988f6694a32fa8ad6433bc03d54f7cp5@SMPD2
1.37e-13FFCP PHASE1:Hg19::chr6:109761883..109761892,+#_e7988f6694a32fa8ad6433bc03d54f7cp5@SMPD2
2.49e-13FFCP PHASE1:Hg19::chr4:151503541..151503558,+#_e6282e56fe339d724350b832b2e443a3p5@MAB21L2
2.49e-13FFCP PHASE2:Hg19::chr4:151503541..151503558,+#_e6282e56fe339d724350b832b2e443a3p5@MAB21L2
2.91e-13FFCP PHASE1:Hg19::chr12:54402694..54402705,+#_1e9140c31e34f403e3967ace9c38db7cp5@HOXC8
2.91e-13FFCP PHASE2:Hg19::chr12:54402694..54402705,+#_1e9140c31e34f403e3967ace9c38db7cp5@HOXC8
3.46e-13FFCP PHASE2:Hg19::chr6:39788965..39788976,+#_af2a5f3a6c2d14499db8b5fc030a9061p@chr6:39788965..39788976, +
3.46e-13FFCP PHASE1:Hg19::chr6:39788965..39788976,+#_af2a5f3a6c2d14499db8b5fc030a9061p@chr6:39788965..39788976, +
1.08e-12FFCP PHASE2:Hg19::chr5:92920719..92920744,+#_d81d0474101b756fde43a73a5bd29e62p17@NR2F1, p31@NR2F2
1.08e-12FFCP PHASE1:Hg19::chr5:92920719..92920744,+#_d81d0474101b756fde43a73a5bd29e62p17@NR2F1, p31@NR2F2
1.41e-12FFCP PHASE1:Hg19::chr1:68851155..68851158,+#_ead6f0b594711398d26c4f929cb9f971p@chr1:68851155..68851158, +
1.41e-12FFCP PHASE2:Hg19::chr1:68851155..68851158,+#_ead6f0b594711398d26c4f929cb9f971p@chr1:68851155..68851158, +
1.49e-12FFCP PHASE1:Hg19::chr21:47421213..47421229,+#_da3b362a1b897a3443264664b2edda7bp26@COL6A1
1.49e-12FFCP PHASE2:Hg19::chr21:47421213..47421229,+#_da3b362a1b897a3443264664b2edda7bp26@COL6A1
2.32e-12FFCP PHASE1:Hg19::chr16:2029725..2029730,-#_93fc9f63ae507a36d59746320e8e064bp@chr16:2029725..2029730, -
2.32e-12FFCP PHASE2:Hg19::chr16:2029725..2029730,-#_93fc9f63ae507a36d59746320e8e064bp@chr16:2029725..2029730, -
2.7e-12FFCP PHASE2:Hg19::chr5:148521381..148521388,+#_41128cb5478646c7954bdb98800be2dap6@ABLIM3
2.7e-12FFCP PHASE1:Hg19::chr5:148521381..148521388,+#_41128cb5478646c7954bdb98800be2dap6@ABLIM3
3.01e-12FFCP PHASE1:Hg19::chr12:7045321..7045337,+#_5a56e222345d39c90c8653745f996105p16@ATN1
3.01e-12FFCP PHASE2:Hg19::chr12:7045321..7045337,+#_5a56e222345d39c90c8653745f996105p16@ATN1
4.16e-12FFCP PHASE2:Hg19::chr17:46627597..46627646,+#_f9d31770f21d2de6b40a39e7a1543bfep@chr17:46627597..46627646, +
4.16e-12FFCP PHASE1:Hg19::chr17:46627597..46627646,+#_f9d31770f21d2de6b40a39e7a1543bfep@chr17:46627597..46627646, +
5.07e-12FFCP PHASE1:Hg19::chr5:78806209..78806210,+#_cecc17456c65f30f14b330e77f9186d6p1@ENST00000482584
5.07e-12FFCP PHASE2:Hg19::chr5:78806209..78806210,+#_cecc17456c65f30f14b330e77f9186d6p1@ENST00000482584
1.38e-11FFCP PHASE1:Hg19::chr8:69770351..69770355,-#_bca64e52c49eb026189f398c25eeb2fdp@chr8:69770351..69770355, -
1.38e-11FFCP PHASE2:Hg19::chr8:69770351..69770355,-#_bca64e52c49eb026189f398c25eeb2fdp@chr8:69770351..69770355, -
1.55e-11FFCP PHASE1:Hg19::chr9:136581203..136581243,-#_3a33390ad4aaa813f03cdfe07af70809p@chr9:136581203..136581243, -
1.55e-11FFCP PHASE2:Hg19::chr9:136581203..136581243,-#_3a33390ad4aaa813f03cdfe07af70809p@chr9:136581203..136581243, -
1.79e-11FFCP PHASE1:Hg19::chr10:101292684..101292706,+#_2e0dec5832932bb5cabd49c6b31b9e86p1@NKX2-3
1.79e-11FFCP PHASE2:Hg19::chr10:101292684..101292706,+#_2e0dec5832932bb5cabd49c6b31b9e86p1@NKX2-3
2.23e-11FFCP PHASE1:Hg19::chr19:19675738..19675742,-#_a563f73f5b53bcefc256a57f72b57de0p@chr19:19675738..19675742, -
2.23e-11FFCP PHASE2:Hg19::chr19:19675738..19675742,-#_a563f73f5b53bcefc256a57f72b57de0p@chr19:19675738..19675742, -
2.28e-11FFCP PHASE2:Hg19::chr17:46670939..46670958,-#_b00c849f96f741ad552d0907e8c921a6p5@AB464575
2.28e-11FFCP PHASE1:Hg19::chr17:46670939..46670958,-#_b00c849f96f741ad552d0907e8c921a6p5@AB464575
2.41e-11FFCP PHASE1:Hg19::chr15:79296506..79296528,-#_330b26a604a36d79cdc7fe5b3e404e92p@chr15:79296506..79296528, -
2.41e-11FFCP PHASE2:Hg19::chr15:79296506..79296528,-#_330b26a604a36d79cdc7fe5b3e404e92p@chr15:79296506..79296528, -
2.47e-11FFCP PHASE2:Hg19::chr2:68407438..68407452,-#_5433be967271bf777a6419ff37fadb23p@chr2:68407438..68407452, -
2.47e-11FFCP PHASE2:Hg19::chr8:97173993..97174018,-#_5433be967271bf777a6419ff37fadb23p@chr8:97173993..97174018, -
2.47e-11FFCP PHASE1:Hg19::chr2:68407438..68407452,-#_5433be967271bf777a6419ff37fadb23p@chr2:68407438..68407452, -
2.47e-11FFCP PHASE1:Hg19::chr8:97173993..97174018,-#_5433be967271bf777a6419ff37fadb23p@chr8:97173993..97174018, -
2.59e-11FFCP PHASE2:Hg19::chr8:12945992..12945996,-#_1d9f91585499e3f4cc80270dd6c1e6d0p25@DLC1
2.59e-11FFCP PHASE1:Hg19::chr8:12945992..12945996,-#_1d9f91585499e3f4cc80270dd6c1e6d0p25@DLC1
2.73e-11FFCP PHASE2:Hg19::chr17:13505472..13505501,+#_ce8f34a820a7435fdd5779ec579a7fefp@chr17:13505472..13505501, +
2.73e-11FFCP PHASE1:Hg19::chr2:37938667..37938670,-#_ce8f34a820a7435fdd5779ec579a7fefp@chr2:37938667..37938670, -
2.73e-11FFCP PHASE1:Hg19::chr17:13505472..13505501,+#_ce8f34a820a7435fdd5779ec579a7fefp@chr17:13505472..13505501, +
2.73e-11FFCP PHASE1:Hg19::chr12:30949271..30949292,+#_ce8f34a820a7435fdd5779ec579a7fefp@chr12:30949271..30949292, +

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