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{{CL
{{CL
|id=CL:0002557
|alt_id=
|name=fibroblast of pulmonary artery
|namespace=cell
|def="A fibroblast of pulmonary artery." [GOC:tfm]
|xref=
|is_a=CL:0000057
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2011-02-28T05:22:27Z
|def="A fibroblast of pulmonary artery." [GOC:tfm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002557
|is_a=CL:0000057
|is_obsolete=
|located_in=
|located_in=
|name=fibroblast of pulmonary artery
|namespace=cell
|obo_creation_date=2011-02-28T05:22:27Z
|part_of=UBERON:0002012
|part_of=UBERON:0002012
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:28, 12 September 2014

Name:fibroblast of pulmonary artery
Namespace:cell
Definition:"A fibroblast of pulmonary artery." [GOC:tfm]
Created by:tmeehan
Creation date:2011-02-28T05:22:27Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000057(fibroblast)
part_of:UBERON:0002012(pulmonary artery)



Children


derives from:FF:0000068 (human fibroblast of pulmonary artery sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002557 (fibroblast of pulmonary artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_b6cbaba74135b03188a80eba3db5b773p@chr4:70707713..70707716, -
5.42e-195FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_b6cbaba74135b03188a80eba3db5b773p@chr4:70707713..70707716, -
9.37e-99FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_5ab6dec18ecfe3f220fd2be67e097b66p@chr4:70707556..70707558, -
9.37e-99FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_5ab6dec18ecfe3f220fd2be67e097b66p@chr4:70707556..70707558, -
1.23e-66FFCP PHASE2:Hg19::chr4:70707608..70707615,-#_726aeaf66efd98f984736bd2b6269ee1p@chr4:70707608..70707615, -
1.23e-66FFCP PHASE1:Hg19::chr4:70707608..70707615,-#_726aeaf66efd98f984736bd2b6269ee1p@chr4:70707608..70707615, -
2.39e-66FFCP PHASE1:Hg19::chr4:70690584..70690589,+#_e49a72b1fd1c9dedb4633782485bba79p@chr4:70690584..70690589, +
2.39e-66FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_e49a72b1fd1c9dedb4633782485bba79p@chr3:156258392..156258395, -
2.39e-66FFCP PHASE2:Hg19::chr4:70690584..70690589,+#_e49a72b1fd1c9dedb4633782485bba79p@chr4:70690584..70690589, +
2.39e-66FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_e49a72b1fd1c9dedb4633782485bba79p@chr3:156258392..156258395, -
4.66e-66FFCP PHASE1:Hg19::chr13:38136724..38136726,+#_847e80753dbb368b0583ea3da0057329p@chr13:38136724..38136726, +
4.66e-66FFCP PHASE2:Hg19::chr13:38136724..38136726,+#_847e80753dbb368b0583ea3da0057329p@chr13:38136724..38136726, +
3.3e-40FFCP PHASE1:Hg19::chr14:61929766..61929777,+#_415d5fa0ba765f4ed09b3a56946ee0edp39@PRKCH
3.3e-40FFCP PHASE2:Hg19::chr14:61929766..61929777,+#_415d5fa0ba765f4ed09b3a56946ee0edp39@PRKCH
5.05e-34FFCP PHASE1:Hg19::chr3:42515138..42515150,-#_d205f2c19cd23be963afbf95d8b1d940p@chr3:42515138..42515150, -
5.05e-34FFCP PHASE1:Hg19::chr14:61929802..61929817,+#_d205f2c19cd23be963afbf95d8b1d940p35@PRKCH
5.05e-34FFCP PHASE2:Hg19::chr3:42515138..42515150,-#_d205f2c19cd23be963afbf95d8b1d940p@chr3:42515138..42515150, -
5.05e-34FFCP PHASE2:Hg19::chr14:61929802..61929817,+#_d205f2c19cd23be963afbf95d8b1d940p35@PRKCH
1.26e-25FFCP PHASE2:Hg19::chr18:37550533..37550548,+#_d326ecf33653f667a1219df55a519067p@chr18:37550533..37550548, +
1.26e-25FFCP PHASE1:Hg19::chr18:37550533..37550548,+#_d326ecf33653f667a1219df55a519067p@chr18:37550533..37550548, +
4.1e-23FFCP PHASE2:Hg19::chr14:61929948..61929975,+#_20a72d188db006b046befcd5a70aeea6p20@PRKCH
4.1e-23FFCP PHASE1:Hg19::chr14:61929948..61929975,+#_20a72d188db006b046befcd5a70aeea6p20@PRKCH
7.72e-21FFCP PHASE1:Hg19::chr1:20407255..20407264,+#_9a6d3b0e8f6683ae93bb67e236fa9f98p@chr1:20407255..20407264, +
7.72e-21FFCP PHASE2:Hg19::chr1:20407255..20407264,+#_9a6d3b0e8f6683ae93bb67e236fa9f98p@chr1:20407255..20407264, +
9.43e-21FFCP PHASE2:Hg19::chr8:55013984..55013996,-#_6ef0da65d6142edf7e258c5cc9a9bbb6p6@LYPLA1
9.43e-21FFCP PHASE1:Hg19::chr8:55013984..55013996,-#_6ef0da65d6142edf7e258c5cc9a9bbb6p6@LYPLA1
3.25e-19FFCP PHASE2:Hg19::chr2:216720351..216720357,+#_f0057375bff91d9112d9807a5b46137dp@chr2:216720351..216720357, +
3.25e-19FFCP PHASE1:Hg19::chr2:216720351..216720357,+#_f0057375bff91d9112d9807a5b46137dp@chr2:216720351..216720357, +
3.91e-19FFCP PHASE2:Hg19::chr18:10979606..10979617,-#_d734c0a8e4c8f3097d5721a1ecf64409p@chr18:10979606..10979617, -
3.91e-19FFCP PHASE1:Hg19::chr18:10979606..10979617,-#_d734c0a8e4c8f3097d5721a1ecf64409p@chr18:10979606..10979617, -
5.26e-18FFCP PHASE1:Hg19::chr1:147245435..147245444,-#_e4e0c1241b2d4f80d57ea6f0b0462c2ap8@GJA5
5.26e-18FFCP PHASE2:Hg19::chr1:147245435..147245444,-#_e4e0c1241b2d4f80d57ea6f0b0462c2ap8@GJA5
1.03e-17FFCP PHASE2:Hg19::chr1:147245407..147245417,-#_9968e4bd549806aa7753fc239a7929b9p5@GJA5
1.03e-17FFCP PHASE1:Hg19::chr1:147245407..147245417,-#_9968e4bd549806aa7753fc239a7929b9p5@GJA5
2.63e-16FFCP PHASE1:Hg19::chr19:16213636..16213660,+#_a956722079fb041338f00449849f131ep@chr19:16213636..16213660, +
2.63e-16FFCP PHASE2:Hg19::chr19:16213636..16213660,+#_a956722079fb041338f00449849f131ep@chr19:16213636..16213660, +
5.56e-16FFCP PHASE2:Hg19::chr4:70707689..70707711,-#_31d2fe00336183eff2f906424edf8ae8p@chr4:70707689..70707711, -
5.56e-16FFCP PHASE1:Hg19::chr4:70707689..70707711,-#_31d2fe00336183eff2f906424edf8ae8p@chr4:70707689..70707711, -
2.11e-14FFCP PHASE1:Hg19::chr7:81146338..81146341,-#_7629e888bfdae27f4c32300eb8373a0bp@chr7:81146338..81146341, -
2.11e-14FFCP PHASE2:Hg19::chr7:81146338..81146341,-#_7629e888bfdae27f4c32300eb8373a0bp@chr7:81146338..81146341, -
8.58e-14FFCP PHASE1:Hg19::chr20:30347712..30347751,+#_71dc0a2077c16aa60df413adbcf1865fp5@TPX2
8.58e-14FFCP PHASE2:Hg19::chr20:30347712..30347751,+#_71dc0a2077c16aa60df413adbcf1865fp5@TPX2
7.68e-13FFCP PHASE1:Hg19::chr7:100777096..100777106,-#_91bb297c27dabe195482e50e7ffc958dp@chr7:100777096..100777106, -
7.68e-13FFCP PHASE2:Hg19::chr7:100777096..100777106,-#_91bb297c27dabe195482e50e7ffc958dp@chr7:100777096..100777106, -
8.64e-13FFCP PHASE2:Hg19::chr1:198203826..198203841,+#_505e88f56bddd4460c68b21908d7373fp@chr1:198203826..198203841, +
8.64e-13FFCP PHASE1:Hg19::chr1:198203826..198203841,+#_505e88f56bddd4460c68b21908d7373fp@chr1:198203826..198203841, +
1.25e-12FFCP PHASE1:Hg19::chr1:147245485..147245494,-#_800a16b62a4ee1a67e3b6fc2aaf72f6dp6@GJA5
1.25e-12FFCP PHASE2:Hg19::chr1:147245485..147245494,-#_800a16b62a4ee1a67e3b6fc2aaf72f6dp6@GJA5
1.75e-12FFCP PHASE1:Hg19::chr1:147245422..147245431,-#_4300d8309b97248943f838faebb46623p7@GJA5
1.75e-12FFCP PHASE2:Hg19::chr1:147245422..147245431,-#_4300d8309b97248943f838faebb46623p7@GJA5
4.31e-12FFCP PHASE2:Hg19::chr14:34034235..34034251,+#_c79538905f2e936b2d0b357c09be4a06p@chr14:34034235..34034251, +
4.31e-12FFCP PHASE1:Hg19::chr14:34034235..34034251,+#_c79538905f2e936b2d0b357c09be4a06p@chr14:34034235..34034251, +
4.81e-12FFCP PHASE1:Hg19::chr9:6248469..6248472,+#_b12ca45f6f4baa7e2d7b47fc6fff8f47p@chr9:6248469..6248472, +
4.81e-12FFCP PHASE2:Hg19::chr9:6248469..6248472,+#_b12ca45f6f4baa7e2d7b47fc6fff8f47p@chr9:6248469..6248472, +
5.05e-12FFCP PHASE2:Hg19::chrX:86773106..86773119,+#_1b8531dfd6812a4072afe9a81056d4c9p5@KLHL4
5.05e-12FFCP PHASE1:Hg19::chrX:86773106..86773119,+#_1b8531dfd6812a4072afe9a81056d4c9p5@KLHL4
1.07e-11FFCP PHASE2:Hg19::chr3:149086808..149086812,+#_60afe8f3e65daf2f304b70aad7bb600cp@chr3:149086808..149086812, +
1.07e-11FFCP PHASE1:Hg19::chr3:149086808..149086812,+#_60afe8f3e65daf2f304b70aad7bb600cp@chr3:149086808..149086812, +
1.31e-11FFCP PHASE2:Hg19::chr2:129503997..129504017,-#_c8e2add163f50f17cecc876dced14e19p@chr2:129503997..129504017, -
1.31e-11FFCP PHASE1:Hg19::chr2:129503997..129504017,-#_c8e2add163f50f17cecc876dced14e19p@chr2:129503997..129504017, -
1.63e-11FFCP PHASE2:Hg19::chr2:208118999..208119017,-#_4d98db57dd5d4f257dd746df24c8c917p@chr2:208118999..208119017, -
1.63e-11FFCP PHASE1:Hg19::chr2:208118999..208119017,-#_4d98db57dd5d4f257dd746df24c8c917p@chr2:208118999..208119017, -
1.81e-11FFCP PHASE2:Hg19::chr9:73216831..73216844,+#_3d68102db06271f77343e4785bc3a1e3p@chr9:73216831..73216844, +
1.81e-11FFCP PHASE1:Hg19::chr9:73216831..73216844,+#_3d68102db06271f77343e4785bc3a1e3p@chr9:73216831..73216844, +
1.1e-10FFCP PHASE1:Hg19::chr18:53169326..53169330,-#_4b6b4aec1eb26aa36d439f1d9cbb45e1p@chr18:53169326..53169330, -
1.1e-10FFCP PHASE2:Hg19::chr18:53169326..53169330,-#_4b6b4aec1eb26aa36d439f1d9cbb45e1p@chr18:53169326..53169330, -
1.33e-10FFCP PHASE2:Hg19::chr22:24237405..24237410,-#_46eab2e507ed43d1963384822920b085p@chr22:24237405..24237410, -
1.33e-10FFCP PHASE1:Hg19::chr22:24237405..24237410,-#_46eab2e507ed43d1963384822920b085p@chr22:24237405..24237410, -
2.08e-10FFCP PHASE1:Hg19::chr22:36623359..36623360,-#_51b2e145acf1a03d6c3d1e2d8475c3cbp@chr22:36623359..36623360, -
2.08e-10FFCP PHASE2:Hg19::chr22:36623359..36623360,-#_51b2e145acf1a03d6c3d1e2d8475c3cbp@chr22:36623359..36623360, -
3.61e-10FFCP PHASE1:Hg19::chr5:167278055..167278068,+#_41dd35b352f1d9b29d1b51eeaab361c6p@chr5:167278055..167278068, +
3.61e-10FFCP PHASE1:Hg19::chr2:18479067..18479081,+#_41dd35b352f1d9b29d1b51eeaab361c6p@chr2:18479067..18479081, +
3.61e-10FFCP PHASE2:Hg19::chr5:167278055..167278068,+#_41dd35b352f1d9b29d1b51eeaab361c6p@chr5:167278055..167278068, +
3.61e-10FFCP PHASE2:Hg19::chr2:18479067..18479081,+#_41dd35b352f1d9b29d1b51eeaab361c6p@chr2:18479067..18479081, +
5.79e-10FFCP PHASE2:Hg19::chr13:38154792..38154807,-#_48242718e8729a15bc32d4ea987aee87p10@POSTN
5.79e-10FFCP PHASE1:Hg19::chr13:38154792..38154807,-#_48242718e8729a15bc32d4ea987aee87p10@POSTN
9.7e-10FFCP PHASE1:Hg19::chr1:173174580..173174592,-#_34d77f022fdf6e0c127da69d2e0875f4p8@TNFSF4
9.7e-10FFCP PHASE2:Hg19::chr1:173174580..173174592,-#_34d77f022fdf6e0c127da69d2e0875f4p8@TNFSF4
2.08e-9FFCP PHASE2:Hg19::chr14:62037287..62037307,+#_59a9d4378a74d6229ecfed7908c22986p1@ENST00000556569
2.08e-9FFCP PHASE2:Hg19::chr1:163045575..163045587,+#_59a9d4378a74d6229ecfed7908c22986p5@RGS4
2.08e-9FFCP PHASE1:Hg19::chr14:62037287..62037307,+#_59a9d4378a74d6229ecfed7908c22986p1@ENST00000556569
2.08e-9FFCP PHASE1:Hg19::chr1:163045575..163045587,+#_59a9d4378a74d6229ecfed7908c22986p5@RGS4
3.31e-9FFCP PHASE2:Hg19::chr18:28621487..28621504,+#_ce9851d4c750688c52b4efb710474e51p@chr18:28621487..28621504, +
3.31e-9FFCP PHASE1:Hg19::chr18:28621487..28621504,+#_ce9851d4c750688c52b4efb710474e51p@chr18:28621487..28621504, +
4.87e-9FFCP PHASE2:Hg19::chr13:110802649..110802660,-#_191455ed1b62dd04125ae544bd2cdf73p12@COL4A1
4.87e-9FFCP PHASE1:Hg19::chr13:110802649..110802660,-#_191455ed1b62dd04125ae544bd2cdf73p12@COL4A1
1.22e-8FFCP PHASE1:Hg19::chr3:171178683..171178696,+#_3484db615e46ba4378db8192d5fc41ebp@chr3:171178683..171178696, +
1.22e-8FFCP PHASE2:Hg19::chr3:171178683..171178696,+#_3484db615e46ba4378db8192d5fc41ebp@chr3:171178683..171178696, +
1.71e-8FFCP PHASE2:Hg19::chr8:123706338..123706351,-#_64e5a1bc01308f92498a655d62999203p1@ENST00000521608
1.71e-8FFCP PHASE1:Hg19::chr8:123706338..123706351,-#_64e5a1bc01308f92498a655d62999203p1@ENST00000521608
1.75e-8FFCP PHASE2:Hg19::chr12:49521567..49521570,+#_3f8f3c8ab6b9348d4bf02ac2adc1e99dp1@ENST00000552893
1.75e-8FFCP PHASE1:Hg19::chr12:49521567..49521570,+#_3f8f3c8ab6b9348d4bf02ac2adc1e99dp1@ENST00000552893
2.29e-8FFCP PHASE1:Hg19::chr4:70591874..70591902,-#_5639c557f95c8a2dead0a6610cf09792p@chr4:70591874..70591902, -
2.29e-8FFCP PHASE1:Hg19::chr17:48437950..48437958,+#_5639c557f95c8a2dead0a6610cf09792p@chr17:48437950..48437958, +
2.29e-8FFCP PHASE2:Hg19::chr4:70591874..70591902,-#_5639c557f95c8a2dead0a6610cf09792p@chr4:70591874..70591902, -
2.29e-8FFCP PHASE2:Hg19::chr17:48437950..48437958,+#_5639c557f95c8a2dead0a6610cf09792p@chr17:48437950..48437958, +
2.33e-8FFCP PHASE2:Hg19::chr19:17529120..17529123,-#_496ac05e3a6323dbee33f6c944533d2dp1@ENST00000526892
2.33e-8FFCP PHASE1:Hg19::chr19:17529120..17529123,-#_496ac05e3a6323dbee33f6c944533d2dp1@ENST00000526892
2.46e-8FFCP PHASE2:Hg19::chr2:133429091..133429104,-#_a21f765de2c82c036780adb70e4eda6ep5@LYPD1
2.46e-8FFCP PHASE1:Hg19::chr2:133429091..133429104,-#_a21f765de2c82c036780adb70e4eda6ep5@LYPD1

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