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{{UBERON
{{UBERON
|id=UBERON:0001556
|alt_id=UBERON:FMA_45659-MA_0002636
|name=lower urinary tract
|namespace=
|def="Subdivision of urinary system which consists of the urinary bladder and the urethra." [FMA:45659]
|xref=FMA:45659;;galen:LowerUrinaryTract;;MA:0002636;;SCTID:181420004
|is_a=UBERON:0000477;;UBERON:0006554
|synonym=
|comment=
|comment=
|alt_id=UBERON:FMA_45659-MA_0002636
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Subdivision of urinary system which consists of the urinary bladder and the urethra." [FMA:45659]
|subset=uberon_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001556
|is_a=UBERON:0000477 ;;UBERON:0006554
|is_obsolete=
|located_in=
|located_in=
|name=lower urinary tract
|namespace=
|obo_creation_date=
|part_of=UBERON:0001008
|part_of=UBERON:0001008
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym=
|union_of=
|xref=FMA:45659;;galen:LowerUrinaryTract;;MA:0002636;;SCTID:181420004
}}
}}

Revision as of 11:04, 12 September 2014

Name:lower urinary tract
Definition:"Subdivision of urinary system which consists of the urinary bladder and the urethra." [FMA:45659]
Xrefs:
links:

FMA:45659
galen:LowerUrinaryTract
MA:0002636

SCTID:181420004
Alt_id: UBERON:FMA_45659-MA_0002636
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000477(anatomical cluster),UBERON:0006554(urinary system structure)
part_of:UBERON:0001008(renal system)



Children

part of:UBERON:0000057 (urethra),UBERON:0001255 (urinary bladder),CL:1000600 (lower urinary tract cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001556 (lower urinary tract), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data