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{{UBERON
{{UBERON
|id=UBERON:0006241
|alt_id=
|name=future spinal cord
|namespace=
|def=
|xref=EFO:0003438;;EHDAA2:0000674;;EHDAA:898;;EMAPA:16092;;EMAPA:16525;;EMAPA:16755;;TAO:0000417;;ZFA:0000417
|is_a=UBERON:0005423
|synonym="presumptive spinal cord" EXACT [ZFA:0000417]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=vertebrate_core
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0006241
|is_a=UBERON:0005423
|is_obsolete=
|located_in=
|located_in=
|name=future spinal cord
|namespace=
|obo_creation_date=
|part_of=UBERON:0000922;;UBERON:0001017
|part_of=UBERON:0000922;;UBERON:0001017
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=vertebrate_core
|preceded_by=
|synonym="presumptive spinal cord" EXACT [ZFA:0000417]
|union_of=
|xref=EFO:0003438;;EHDAA2:0000674;;EHDAA:898;;EMAPA:16092;;EMAPA:16525;;EMAPA:16755;;TAO:0000417;;ZFA:0000417
}}
}}

Revision as of 11:39, 12 September 2014

Name:future spinal cord
Xrefs:
links:

EFO:0003438
EHDAA2:0000674
EHDAA:898
EMAPA:16092
EMAPA:16525
EMAPA:16755
TAO:0000417

ZFA:0000417
Synonyms: "presumptive spinal cord" EXACT [ZFA:0000417]
Subset: vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005423(developing anatomical structure)
part_of:UBERON:0000922(embryo),UBERON:0001017(central nervous system)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006241 (future spinal cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data