Personal tools

UBERON:0010890: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0010890
|alt_id=
|name=pelvic complex muscle
|namespace=
|def="Muscles of the pelvic girdle, hindlimb or pelvic fin." [UBERON:cjm]
|xref=AAO:0000218;;FMA:9622;;MA:0000663
|is_a=UBERON:0001630
|synonym="lower limb muscle" RELATED INCONSISTENT [FMA:9622];;"muscle of lower limb" RELATED INCONSISTENT [FMA:9622];;"pelvic girdle or hind limb muscle" NARROW [UBERON:cjm];;"pelvic girdle or posterior limb muscle" NARROW [UBERON:cjm]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Muscles of the pelvic girdle, hindlimb or pelvic fin." [UBERON:cjm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0010890
|is_a=UBERON:0014892
|is_obsolete=
|located_in=
|located_in=
|part_of=UBERON:0010709
|name=pelvic complex muscle
|namespace=
|obo_creation_date=
|part_of=UBERON:0010709;;UBERON:0014792
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Muscles of the pelvic girdle, thigh, leg (crus), and foot (pes).[AAO]" xsd:string
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Muscles of the pelvic girdle, thigh, leg (crus), and foot (pes).[AAO]" xsd:string
|is_obsolete=
|subset=
|preceded_by=
|synonym="lower limb muscle" RELATED INCONSISTENT [FMA:9622];;"muscle of lower limb" RELATED INCONSISTENT [FMA:9622];;"pelvic girdle or hind limb muscle" NARROW [UBERON:cjm];;"pelvic girdle or posterior limb muscle" NARROW [UBERON:cjm]
|union_of=
|xref=AAO:0000218;;FMA:9622;;MA:0000663
}}
}}

Revision as of 11:51, 12 September 2014

Name:pelvic complex muscle
Definition:"Muscles of the pelvic girdle, hindlimb or pelvic fin." [UBERON:cjm]
Xrefs:
links:

AAO:0000218
FMA:9622

MA:0000663
Synonyms: "lower limb muscle" RELATED INCONSISTENT [FMA:9622]
"muscle of lower limb" RELATED INCONSISTENT [FMA:9622]
"pelvic girdle or hind limb muscle" NARROW [UBERON:cjm]
"pelvic girdle or posterior limb muscle" NARROW [UBERON:cjm]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0014892(skeletal muscle organ)
part_of:UBERON:0010709(pelvic complex),UBERON:0014792(musculature of pelvic complex)



Children

is a:UBERON:0014795 (pelvic appendage muscle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010890 (pelvic complex muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_15333a85a2894ca74b9225c014f45684p@chr4:85166508..85166512, +
5.42e-195FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_15333a85a2894ca74b9225c014f45684p@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_15333a85a2894ca74b9225c014f45684p@chr4:85166508..85166512, +
5.42e-195FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_15333a85a2894ca74b9225c014f45684p@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_15333a85a2894ca74b9225c014f45684p@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_15333a85a2894ca74b9225c014f45684p@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_15333a85a2894ca74b9225c014f45684p@chr2:76859417..76859418, +
5.42e-195FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_15333a85a2894ca74b9225c014f45684p@chr2:76859417..76859418, +
5.42e-195FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_15333a85a2894ca74b9225c014f45684p@chr11:3691037..3691040, +
5.42e-195FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_15333a85a2894ca74b9225c014f45684p@chr11:3691037..3691040, +
5.42e-195FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_15333a85a2894ca74b9225c014f45684p@chr4:186423235..186423240, -
5.42e-195FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_15333a85a2894ca74b9225c014f45684p@chr22:25535147..25535150, +
5.42e-195FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_15333a85a2894ca74b9225c014f45684p@chr4:186423235..186423240, -
5.42e-195FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_15333a85a2894ca74b9225c014f45684p@chr22:25535147..25535150, +
5.42e-195FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_15333a85a2894ca74b9225c014f45684p@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_15333a85a2894ca74b9225c014f45684p@chr10:79759687..79759690, +
5.42e-195FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_15333a85a2894ca74b9225c014f45684p@chr2:179396370..179396375, -
5.42e-195FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_15333a85a2894ca74b9225c014f45684p@chr2:179396370..179396375, -
9.37e-99FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_23bfa4eaf25b34638b043766ba821b56p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_23bfa4eaf25b34638b043766ba821b56p54@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_23bfa4eaf25b34638b043766ba821b56p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_23bfa4eaf25b34638b043766ba821b56p54@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_23bfa4eaf25b34638b043766ba821b56p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_23bfa4eaf25b34638b043766ba821b56p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_23bfa4eaf25b34638b043766ba821b56p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_23bfa4eaf25b34638b043766ba821b56p104@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_23bfa4eaf25b34638b043766ba821b56p104@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_23bfa4eaf25b34638b043766ba821b56p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_23bfa4eaf25b34638b043766ba821b56p7@FLJ36848
9.37e-99FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_23bfa4eaf25b34638b043766ba821b56p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_23bfa4eaf25b34638b043766ba821b56p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_23bfa4eaf25b34638b043766ba821b56p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_23bfa4eaf25b34638b043766ba821b56p7@FLJ36848
9.37e-99FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_23bfa4eaf25b34638b043766ba821b56p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_23bfa4eaf25b34638b043766ba821b56p108@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_23bfa4eaf25b34638b043766ba821b56p108@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_23bfa4eaf25b34638b043766ba821b56p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_23bfa4eaf25b34638b043766ba821b56p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_23bfa4eaf25b34638b043766ba821b56p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_23bfa4eaf25b34638b043766ba821b56p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_23bfa4eaf25b34638b043766ba821b56p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_23bfa4eaf25b34638b043766ba821b56p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_23bfa4eaf25b34638b043766ba821b56p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_23bfa4eaf25b34638b043766ba821b56p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_23bfa4eaf25b34638b043766ba821b56p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_23bfa4eaf25b34638b043766ba821b56p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_23bfa4eaf25b34638b043766ba821b56p93@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_23bfa4eaf25b34638b043766ba821b56p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_23bfa4eaf25b34638b043766ba821b56p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_23bfa4eaf25b34638b043766ba821b56p93@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_23bfa4eaf25b34638b043766ba821b56p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_23bfa4eaf25b34638b043766ba821b56p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_23bfa4eaf25b34638b043766ba821b56p77@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_23bfa4eaf25b34638b043766ba821b56p77@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_23bfa4eaf25b34638b043766ba821b56p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_23bfa4eaf25b34638b043766ba821b56p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_23bfa4eaf25b34638b043766ba821b56p46@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_23bfa4eaf25b34638b043766ba821b56p46@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_23bfa4eaf25b34638b043766ba821b56p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_23bfa4eaf25b34638b043766ba821b56p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_23bfa4eaf25b34638b043766ba821b56p@chr15:51060095..51060101, +
2.55e-98FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_6553c1f07298d210cf96340082578b05p@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chr18:8608021..8608050,+#_6553c1f07298d210cf96340082578b05p@chr18:8608021..8608050, +
2.55e-98FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_6553c1f07298d210cf96340082578b05p@chr3:69168368..69168389, -
2.55e-98FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_6553c1f07298d210cf96340082578b05p@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chr3:69168368..69168389,-#_6553c1f07298d210cf96340082578b05p@chr3:69168368..69168389, -
2.55e-98FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_6553c1f07298d210cf96340082578b05p38@CLIP1
2.55e-98FFCP PHASE1:Hg19::chr3:35732964..35732965,+#_6553c1f07298d210cf96340082578b05p@chr3:35732964..35732965, +
2.55e-98FFCP PHASE1:Hg19::chr12:69653866..69653876,+#_6553c1f07298d210cf96340082578b05p@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr2:29398214..29398229,+#_6553c1f07298d210cf96340082578b05p27@CLIP4
2.55e-98FFCP PHASE2:Hg19::chr3:35732964..35732965,+#_6553c1f07298d210cf96340082578b05p@chr3:35732964..35732965, +
2.55e-98FFCP PHASE2:Hg19::chr2:29398214..29398229,+#_6553c1f07298d210cf96340082578b05p27@CLIP4
2.55e-98FFCP PHASE1:Hg19::chr12:102079632..102079647,-#_6553c1f07298d210cf96340082578b05p@chr12:102079632..102079647, -
2.55e-98FFCP PHASE1:Hg19::chr18:8608021..8608050,+#_6553c1f07298d210cf96340082578b05p@chr18:8608021..8608050, +
2.55e-98FFCP PHASE1:Hg19::chr6:125535391..125535409,+#_6553c1f07298d210cf96340082578b05p@chr6:125535391..125535409, +
2.55e-98FFCP PHASE1:Hg19::chr3:46924232..46924241,+#_6553c1f07298d210cf96340082578b05p@chr3:46924232..46924241, +
2.55e-98FFCP PHASE2:Hg19::chr6:125535391..125535409,+#_6553c1f07298d210cf96340082578b05p@chr6:125535391..125535409, +
2.55e-98FFCP PHASE2:Hg19::chr3:46924232..46924241,+#_6553c1f07298d210cf96340082578b05p@chr3:46924232..46924241, +
2.55e-98FFCP PHASE1:Hg19::chr2:152566311..152566321,-#_6553c1f07298d210cf96340082578b05p@chr2:152566311..152566321, -
2.55e-98FFCP PHASE1:Hg19::chr2:168102459..168102468,+#_6553c1f07298d210cf96340082578b05p73@XIRP2
2.55e-98FFCP PHASE2:Hg19::chr12:69653866..69653876,+#_6553c1f07298d210cf96340082578b05p@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr22:26299595..26299605,+#_6553c1f07298d210cf96340082578b05p@chr22:26299595..26299605, +
2.55e-98FFCP PHASE2:Hg19::chr2:168102459..168102468,+#_6553c1f07298d210cf96340082578b05p73@XIRP2
2.55e-98FFCP PHASE2:Hg19::chr22:26299595..26299605,+#_6553c1f07298d210cf96340082578b05p@chr22:26299595..26299605, +
2.55e-98FFCP PHASE2:Hg19::chr10:29918007..29918031,-#_6553c1f07298d210cf96340082578b05p@chr10:29918007..29918031, -
2.55e-98FFCP PHASE1:Hg19::chr10:97037060..97037066,-#_6553c1f07298d210cf96340082578b05p@chr10:97037060..97037066, -
2.55e-98FFCP PHASE1:Hg19::chr5:95180155..95180172,+#_6553c1f07298d210cf96340082578b05p@chr5:95180155..95180172, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "Muscles of the pelvic girdle, thigh, leg (crus), and foot (pes).[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0010890&oldid=3274723"