CL:0000081: Difference between revisions

Latest revision as of 16:29, 12 September 2014

Name:

blood cell

Namespace:

FANTOM

Definition:

"A cell found predominately in the blood." [GOC:add, GOC:tfm]

Xrefs:

Expandlinks:

Ontology association Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies. link to ontology dataset data

Parents

is_a:	CL:0000988(hematopoietic cell)

Children

is a:	CL:0000094 (granulocyte),FF:0000282 (Whole blood depleted of CD14-positive and CD15-positive cells (pluriselect depleted)),FF:0000283 (Whole blood depleted of CD19+ cells (pluriselect depleted)),FF:0000284 (Whole blood depleted of CD4+ and CD8+ cells (pluriselect depleted)),FF:10452-106G2 (cord blood derived cell line:COBL-a 24h infection(-C))

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

10452-106G2 (cord blood derived cell line:COBL-a 24h infection(-C))
11233-116C9 (Neutrophils, donor1)
11314-117C9 (Neutrophils, donor2)
11390-118C4 (Neutrophils, donor3)
11542-120B3
11546-120B7
11549-120C1 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor1)
11622-122B2
11626-122B6
11629-122B9 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor2)

... further results Mouse (Mus musculus)

10452-106G2 (cord blood derived cell line:COBL-a 24h infection(-C))
11233-116C9 (Neutrophils, donor1)
11314-117C9 (Neutrophils, donor2)
11390-118C4 (Neutrophils, donor3)
11542-120B3
11546-120B7
11549-120C1 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor1)
11622-122B2
11626-122B6
11629-122B9 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor2)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000081 (blood cell), sorted by p-values Analyst: Hideya Kawaji link to source dataset human : data mouse : data

Search:

P-value	FFCP	Short description
5.22e-107	FFCP PHASE1:Hg19::chr12:3827524..3827527,+	p@chr12:3827524..3827527, +
5.22e-107	FFCP PHASE2:Hg19::chr12:3827524..3827527,+	p@chr12:3827524..3827527, +
5.22e-107	FFCP PHASE1:Hg19::chr10:73530674..73530683,-	p@chr10:73530674..73530683, -
5.22e-107	FFCP PHASE2:Hg19::chr10:73530674..73530683,-	p@chr10:73530674..73530683, -
2.9e-97	FFCP PHASE2:Hg19::chr11:67055888..67055896,-	p@chr11:67055888..67055896, -
2.9e-97	FFCP PHASE1:Hg19::chr11:67055888..67055896,-	p@chr11:67055888..67055896, -
1.93e-89	FFCP PHASE1:Hg19::chr8:133774199..133774210,-	p@chr8:133774199..133774210, -
1.93e-89	FFCP PHASE2:Hg19::chr1:182367189..182367199,+	p@chr1:182367189..182367199, +
1.93e-89	FFCP PHASE1:Hg19::chr1:206731759..206731770,+	p@chr1:206731759..206731770, +
1.93e-89	FFCP PHASE1:Hg19::chr2:120967889..120967892,-	p@chr2:120967889..120967892, -
1.93e-89	FFCP PHASE1:Hg19::chr17:80187468..80187472,+	p@chr17:80187468..80187472, +
1.93e-89	FFCP PHASE2:Hg19::chr2:70246139..70246146,-	p@chr2:70246139..70246146, -
1.93e-89	FFCP PHASE1:Hg19::chr15:90579320..90579331,-	p@chr15:90579320..90579331, -
1.93e-89	FFCP PHASE1:Hg19::chr11:1865720..1865724,+	p@chr11:1865720..1865724, +
1.93e-89	FFCP PHASE2:Hg19::chr12:8720206..8720211,-	p4@ENST00000542819
1.93e-89	FFCP PHASE2:Hg19::chr8:133774199..133774210,-	p@chr8:133774199..133774210, -
1.93e-89	FFCP PHASE2:Hg19::chr2:120967889..120967892,-	p@chr2:120967889..120967892, -
1.93e-89	FFCP PHASE2:Hg19::chr1:27155357..27155367,+	p@chr1:27155357..27155367, +
1.93e-89	FFCP PHASE2:Hg19::chr7:128048285..128048310,-	p@chr7:128048285..128048310, -
1.93e-89	FFCP PHASE1:Hg19::chr1:27155357..27155367,+	p@chr1:27155357..27155367, +
1.93e-89	FFCP PHASE2:Hg19::chr11:1865720..1865724,+	p@chr11:1865720..1865724, +
1.93e-89	FFCP PHASE1:Hg19::chr2:103106370..103106380,+	p@chr2:103106370..103106380, +
1.93e-89	FFCP PHASE2:Hg19::chr17:80187468..80187472,+	p@chr17:80187468..80187472, +
1.93e-89	FFCP PHASE2:Hg19::chr2:120967895..120967903,-	p@chr2:120967895..120967903, -
1.93e-89	FFCP PHASE2:Hg19::chr2:103106370..103106380,+	p@chr2:103106370..103106380, +
1.93e-89	FFCP PHASE1:Hg19::chr7:128048285..128048310,-	p@chr7:128048285..128048310, -
1.93e-89	FFCP PHASE1:Hg19::chr2:70246139..70246146,-	p@chr2:70246139..70246146, -
1.93e-89	FFCP PHASE1:Hg19::chr1:208712347..208712354,+	p@chr1:208712347..208712354, +
1.93e-89	FFCP PHASE2:Hg19::chr1:206731759..206731770,+	p@chr1:206731759..206731770, +
1.93e-89	FFCP PHASE1:Hg19::chr14:88469399..88469404,-	p@chr14:88469399..88469404, -
1.93e-89	FFCP PHASE2:Hg19::chr14:88469399..88469404,-	p@chr14:88469399..88469404, -
1.93e-89	FFCP PHASE1:Hg19::chr12:8720206..8720211,-	p4@ENST00000542819
1.93e-89	FFCP PHASE2:Hg19::chr15:90579320..90579331,-	p@chr15:90579320..90579331, -
1.93e-89	FFCP PHASE1:Hg19::chr1:182367189..182367199,+	p@chr1:182367189..182367199, +
1.93e-89	FFCP PHASE1:Hg19::chr2:120967895..120967903,-	p@chr2:120967895..120967903, -
1.93e-89	FFCP PHASE2:Hg19::chr7:112062470..112062479,+	p@chr7:112062470..112062479, +
1.93e-89	FFCP PHASE1:Hg19::chr7:112062470..112062479,+	p@chr7:112062470..112062479, +
1.93e-89	FFCP PHASE2:Hg19::chr1:208712347..208712354,+	p@chr1:208712347..208712354, +
1.24e-87	FFCP PHASE1:Hg19::chr3:12689370..12689373,+	p@chr3:12689370..12689373, +
1.24e-87	FFCP PHASE2:Hg19::chr3:12689370..12689373,+	p@chr3:12689370..12689373, +
1.83e-87	FFCP PHASE2:Hg19::chrX:22015219..22015221,+	p@chrX:22015219..22015221, +
1.83e-87	FFCP PHASE1:Hg19::chrX:22015219..22015221,+	p@chrX:22015219..22015221, +
5.17e-82	FFCP PHASE2:Hg19::chr3:72150292..72150301,+	p@chr3:72150292..72150301, +
5.17e-82	FFCP PHASE1:Hg19::chr3:72150292..72150301,+	p@chr3:72150292..72150301, +
7.87e-82	FFCP PHASE2:Hg19::chr19:18613543..18613548,-	p@chr19:18613543..18613548, -
7.87e-82	FFCP PHASE1:Hg19::chr19:18613543..18613548,-	p@chr19:18613543..18613548, -
2.25e-81	FFCP PHASE1:Hg19::chr3:128946643..128946657,-	p@chr3:128946643..128946657, -
2.25e-81	FFCP PHASE2:Hg19::chr3:128946643..128946657,-	p@chr3:128946643..128946657, -
1.09e-80	FFCP PHASE2:Hg19::chr1:182367155..182367159,+	p@chr1:182367155..182367159, +
1.09e-80	FFCP PHASE1:Hg19::chr1:182367155..182367159,+	p@chr1:182367155..182367159, +
2.48e-80	FFCP PHASE2:Hg19::chr2:136971902..136971905,-	p@chr2:136971902..136971905, -
2.48e-80	FFCP PHASE1:Hg19::chr2:136971902..136971905,-	p@chr2:136971902..136971905, -
5.93e-80	FFCP PHASE1:Hg19::chr15:90574798..90574806,+	p@chr15:90574798..90574806, +
5.93e-80	FFCP PHASE2:Hg19::chr15:90574798..90574806,+	p@chr15:90574798..90574806, +
1.26e-76	FFCP PHASE1:Hg19::chr1:117057737..117057747,-	p@chr1:117057737..117057747, -
1.26e-76	FFCP PHASE2:Hg19::chr1:117057737..117057747,-	p@chr1:117057737..117057747, -
8.79e-75	FFCP PHASE2:Hg19::chr17:58247963..58247970,-	p@chr17:58247963..58247970, -
8.79e-75	FFCP PHASE2:Hg19::chr2:70246087..70246098,-	p@chr2:70246087..70246098, -
8.79e-75	FFCP PHASE1:Hg19::chr11:75484913..75484923,+	p@chr11:75484913..75484923, +
8.79e-75	FFCP PHASE2:Hg19::chr15:69075220..69075232,-	p@chr15:69075220..69075232, -
8.79e-75	FFCP PHASE1:Hg19::chr1:185389832..185389838,-	p@chr1:185389832..185389838, -
8.79e-75	FFCP PHASE1:Hg19::chr11:75482683..75482690,-	p@chr11:75482683..75482690, -
8.79e-75	FFCP PHASE2:Hg19::chr1:159047469..159047474,+	p@chr1:159047469..159047474, +
8.79e-75	FFCP PHASE1:Hg19::chr21:35570914..35570921,+	p@chr21:35570914..35570921, +
8.79e-75	FFCP PHASE2:Hg19::chr15:80189589..80189598,+	p@chr15:80189589..80189598, +
8.79e-75	FFCP PHASE1:Hg19::chr2:70274580..70274587,-	p@chr2:70274580..70274587, -
8.79e-75	FFCP PHASE1:Hg19::chr20:4792540..4792567,+	p@chr20:4792540..4792567, +
8.79e-75	FFCP PHASE2:Hg19::chr20:48963128..48963163,+	p@chr20:48963128..48963163, +
8.79e-75	FFCP PHASE1:Hg19::chr2:70246087..70246098,-	p@chr2:70246087..70246098, -
8.79e-75	FFCP PHASE1:Hg19::chr1:198610136..198610143,+	p@chr1:198610136..198610143, +
8.79e-75	FFCP PHASE2:Hg19::chr11:75484913..75484923,+	p@chr11:75484913..75484923, +
8.79e-75	FFCP PHASE1:Hg19::chr21:46334376..46334408,+	p@chr21:46334376..46334408, +
8.79e-75	FFCP PHASE1:Hg19::chr15:69075220..69075232,-	p@chr15:69075220..69075232, -
8.79e-75	FFCP PHASE2:Hg19::chr8:133774445..133774459,+	p@chr8:133774445..133774459, +
8.79e-75	FFCP PHASE2:Hg19::chr21:35570914..35570921,+	p@chr21:35570914..35570921, +
8.79e-75	FFCP PHASE2:Hg19::chr20:4792540..4792567,+	p@chr20:4792540..4792567, +
8.79e-75	FFCP PHASE2:Hg19::chr21:42739014..42739023,+	p@chr21:42739014..42739023, +
8.79e-75	FFCP PHASE2:Hg19::chr21:46334376..46334408,+	p@chr21:46334376..46334408, +
8.79e-75	FFCP PHASE1:Hg19::chr17:58247963..58247970,-	p@chr17:58247963..58247970, -
8.79e-75	FFCP PHASE2:Hg19::chr11:75482683..75482690,-	p@chr11:75482683..75482690, -
8.79e-75	FFCP PHASE1:Hg19::chr1:159047469..159047474,+	p@chr1:159047469..159047474, +
8.79e-75	FFCP PHASE2:Hg19::chr4:74702740..74702748,-	p@chr4:74702740..74702748, -
8.79e-75	FFCP PHASE1:Hg19::chr20:48963128..48963163,+	p@chr20:48963128..48963163, +
8.79e-75	FFCP PHASE2:Hg19::chr2:70274580..70274587,-	p@chr2:70274580..70274587, -
8.79e-75	FFCP PHASE1:Hg19::chr4:74702740..74702748,-	p@chr4:74702740..74702748, -
8.79e-75	FFCP PHASE2:Hg19::chr1:198610136..198610143,+	p@chr1:198610136..198610143, +
8.79e-75	FFCP PHASE1:Hg19::chr21:42739014..42739023,+	p@chr21:42739014..42739023, +
8.79e-75	FFCP PHASE2:Hg19::chr1:185389832..185389838,-	p@chr1:185389832..185389838, -
8.79e-75	FFCP PHASE1:Hg19::chr8:133774445..133774459,+	p@chr8:133774445..133774459, +
8.79e-75	FFCP PHASE1:Hg19::chr15:80189589..80189598,+	p@chr15:80189589..80189598, +
1.02e-74	FFCP PHASE2:Hg19::chr11:1865774..1865782,+	p@chr11:1865774..1865782, +
1.02e-74	FFCP PHASE2:Hg19::chr2:103039663..103039672,+	p6@IL18RAP
1.02e-74	FFCP PHASE1:Hg19::chr11:1865774..1865782,+	p@chr11:1865774..1865782, +
1.02e-74	FFCP PHASE1:Hg19::chr2:103039663..103039672,+	p6@IL18RAP
3.92e-73	FFCP PHASE1:Hg19::chr11:15601676..15601684,-	p@chr11:15601676..15601684, -
3.92e-73	FFCP PHASE2:Hg19::chr11:15601676..15601684,-	p@chr11:15601676..15601684, -
5.95e-72	FFCP PHASE2:Hg19::chr2:136971977..136971986,-	p@chr2:136971977..136971986, -
5.95e-72	FFCP PHASE1:Hg19::chr2:136971977..136971986,-	p@chr2:136971977..136971986, -
6.52e-72	FFCP PHASE1:Hg19::chr3:129546717..129546727,-	p29@TMCC1
6.52e-72	FFCP PHASE2:Hg19::chr14:88468930..88468934,-	p@chr14:88468930..88468934, -

Showing 1 to 100 of 100 entries

@@ Line 13: / Line 13: @@
 |located_in=
 |name=blood cell
-|namespace=cell;;efo
+|namespace=FANTOM
 |obo_creation_date=
 |part_of=

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CL:0000081: Difference between revisions

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Latest revision as of 16:29, 12 September 2014

Ontology Tree: Loaded from BioPortal

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