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CL:0000082: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=epithelial cell of lung
|name=epithelial cell of lung
|namespace=cell
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0002048;;UBERON:0000115;;UBERON:0002048
|part_of=UBERON:0002048;;UBERON:0000115;;UBERON:0002048

Latest revision as of 16:29, 12 September 2014

Name:epithelial cell of lung
Namespace:FANTOM
Xrefs:
links:
BTO:0004299


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000066(epithelial cell)
part_of:UBERON:0002048(lung),UBERON:0000115(lung epithelium),UBERON:0002048(lung)



Children


is a:CL:0010003 (epithelial cell of alveolus of lung)
derives from:FF:0100762 (lung cancer cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000082 (epithelial cell of lung), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data