CL:0000412

Name:	polyploid cell
Namespace:	FANTOM
Definition:	"A cell whose nucleus, or nuclei, each contain more than two haploid genomes." [FB:ma]

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0000003(native cell)

Children

is a:	CL:0000417 (endopolyploid cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 10484-107A7 (hepatoma cell line:Li-7)
• 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
• 10629-108H8
• 10630-108H9
• 10632-108I2
• 10633-108I3 (hepatoblastoma cell line:HuH-6)
• 10706-109H4 (pleomorphic hepatocellular carcinoma cell line:SNU-387)
• 10746-110C8
• 10818-111B8 (hepatocellular carcinoma cell line: HepG2 ENCODE, biol_rep1)
• 10819-111B9 (hepatocellular carcinoma cell line: HepG2 ENCODE, biol_rep2)

... further results Mouse (Mus musculus)

• 10484-107A7 (hepatoma cell line:Li-7)
• 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
• 10629-108H8
• 10630-108H9
• 10632-108I2
• 10633-108I3 (hepatoblastoma cell line:HuH-6)
• 10706-109H4 (pleomorphic hepatocellular carcinoma cell line:SNU-387)
• 10746-110C8
• 10818-111B8 (hepatocellular carcinoma cell line: HepG2 ENCODE, biol_rep1)
• 10819-111B9 (hepatocellular carcinoma cell line: HepG2 ENCODE, biol_rep2)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000412 (polyploid cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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No analysis results for this cluster