UBERON:0001982: Difference between revisions
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|located_in= | |located_in= | ||
|name=capillary | |name=capillary | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 17:23, 12 September 2014
| Name: | capillary | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Microvessel of the blood circulation system lined with vascular endothelial cells[ZFA]. Any of the smallest blood vessels connecting arterioles with venules." [NLM:capillary, Wikipedia:Capillary] | ||
| Xrefs: |
| ||
| Synonyms: |
"blood capillary" EXACT [] "capillary vessel" EXACT [] | ||
| Alt_id: | UBERON:FMA_63194-MA_0000065-XAO_0000116 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001981(blood vessel),UBERON:0010523(microcirculatory vessel) |
|---|
Children
| is a: | UBERON:2005260 (fenestrated capillary) |
|---|---|
| part of: | UBERON:0001915 (endothelium of capillary) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11342-117G1 (Endothelial Cells - Microvascular, donor2)
- 11414-118F1 (Endothelial Cells - Microvascular, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001982 (capillary), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.06e-99 | FFCP PHASE2:Hg19::chr15:65935283..65935297,+#_d93d5de66e02baf3806c3c0d25496b22 | p11@SLC24A1 |
| 4.06e-99 | FFCP PHASE1:Hg19::chr15:65935283..65935297,+#_d93d5de66e02baf3806c3c0d25496b22 | p11@SLC24A1 |
| 6.24e-88 | FFCP PHASE1:Hg19::chr12:6161828..6161837,-#_2b959f29f41ca4f86a2c6786fe63f830 | p@chr12:6161828..6161837, - |
| 6.24e-88 | FFCP PHASE2:Hg19::chr12:6161828..6161837,-#_2b959f29f41ca4f86a2c6786fe63f830 | p@chr12:6161828..6161837, - |
| 9.74e-88 | FFCP PHASE1:Hg19::chr13:102379103..102379108,-#_a3688a3eebe91ab4df10fdb58fee607a | p@chr13:102379103..102379108, - |
| 9.74e-88 | FFCP PHASE2:Hg19::chr13:102379103..102379108,-#_a3688a3eebe91ab4df10fdb58fee607a | p@chr13:102379103..102379108, - |
| 2.28e-85 | FFCP PHASE2:Hg19::chr1:214453986..214454002,+#_53e20c5ed156055a65f5c1b3fddd3388 | p10@SMYD2 |
| 2.28e-85 | FFCP PHASE1:Hg19::chr1:214453986..214454002,+#_53e20c5ed156055a65f5c1b3fddd3388 | p10@SMYD2 |
| 3.04e-85 | FFCP PHASE2:Hg19::chr11:108743594..108743616,+#_550432dbee7b0a2748828d32a31b630c | p@chr11:108743594..108743616, + |
| 3.04e-85 | FFCP PHASE1:Hg19::chr11:108743594..108743616,+#_550432dbee7b0a2748828d32a31b630c | p@chr11:108743594..108743616, + |
| 7.21e-85 | FFCP PHASE1:Hg19::chr1:94526344..94526353,-#_492aa60256e7f084da9cabfd45c3cd07 | p4@ABCA4 |
| 7.21e-85 | FFCP PHASE2:Hg19::chr1:94526344..94526353,-#_492aa60256e7f084da9cabfd45c3cd07 | p4@ABCA4 |
| 1.28e-84 | FFCP PHASE2:Hg19::chr9:13446440..13446456,+#_fbbb1725c99be3f0a7cc23986742e202 | p2@ENST00000428006 |
| 1.28e-84 | FFCP PHASE1:Hg19::chr9:13446440..13446456,+#_fbbb1725c99be3f0a7cc23986742e202 | p2@ENST00000428006 |
| 2.27e-84 | FFCP PHASE1:Hg19::chr18:54339823..54339834,+#_c332eec2016dfae6bfbe91a3783c5124 | p8@WDR7 |
| 2.27e-84 | FFCP PHASE2:Hg19::chr18:54339823..54339834,+#_c332eec2016dfae6bfbe91a3783c5124 | p8@WDR7 |
| 3.03e-84 | FFCP PHASE1:Hg19::chr7:79998842..79998855,+#_0e298fea96f04faccc7d15d9a93d3690 | p25@CD36 |
| 3.03e-84 | FFCP PHASE2:Hg19::chr7:79998842..79998855,+#_0e298fea96f04faccc7d15d9a93d3690 | p25@CD36 |
| 4.55e-74 | FFCP PHASE2:Hg19::chr4:38057520..38057536,-#_979c4f5863a5b8988025260f3672f664 | p@chr4:38057520..38057536, - |
| 4.55e-74 | FFCP PHASE1:Hg19::chr4:38057520..38057536,-#_979c4f5863a5b8988025260f3672f664 | p@chr4:38057520..38057536, - |
| 5.01e-67 | FFCP PHASE1:Hg19::chr20:62679771..62679782,-#_b93cab3baa681b2da70d144f67140ee3 | p4@SOX18 |
| 5.01e-67 | FFCP PHASE2:Hg19::chr20:62679771..62679782,-#_b93cab3baa681b2da70d144f67140ee3 | p4@SOX18 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:54893310..54893315,-#_8a54abe239619e4fc82fdcc30b22d2a3 | p15@C17orf67 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:122514086..122514090,+#_8a54abe239619e4fc82fdcc30b22d2a3 | p5@TSN |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:122514086..122514090,+#_8a54abe239619e4fc82fdcc30b22d2a3 | p5@TSN |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:54893310..54893315,-#_8a54abe239619e4fc82fdcc30b22d2a3 | p15@C17orf67 |
| 1.33e-60 | FFCP PHASE2:Hg19::chr3:30560333..30560348,+#_78aeeca4df67f4a8336469e48dc4c9f2 | p@chr3:30560333..30560348, + |
| 1.33e-60 | FFCP PHASE1:Hg19::chr3:30560333..30560348,+#_78aeeca4df67f4a8336469e48dc4c9f2 | p@chr3:30560333..30560348, + |
| 1.51e-54 | FFCP PHASE2:Hg19::chr2:56149828..56149839,-#_0f739b94c634acba84d6c558467c23c4 | p17@EFEMP1 |
| 1.51e-54 | FFCP PHASE1:Hg19::chr2:56149828..56149839,-#_0f739b94c634acba84d6c558467c23c4 | p17@EFEMP1 |
| 2.87e-53 | FFCP PHASE2:Hg19::chr5:106837881..106837888,-#_19a1ff1697eca95f33a837cdb0f96cb6 | p@chr5:106837881..106837888, - |
| 2.87e-53 | FFCP PHASE1:Hg19::chr5:106837881..106837888,-#_19a1ff1697eca95f33a837cdb0f96cb6 | p@chr5:106837881..106837888, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr2:73311401..73311431,-#_19a1ff1697eca95f33a837cdb0f96cb6 | p17@RAB11FIP5 |
| 2.87e-53 | FFCP PHASE1:Hg19::chr2:73311401..73311431,-#_19a1ff1697eca95f33a837cdb0f96cb6 | p17@RAB11FIP5 |
| 3.75e-53 | FFCP PHASE1:Hg19::chr15:74935416..74935419,-#_f6e572a40e4fd928d8c18c2209dd82cd | p@chr15:74935416..74935419, - |
| 3.75e-53 | FFCP PHASE2:Hg19::chr15:74935416..74935419,-#_f6e572a40e4fd928d8c18c2209dd82cd | p@chr15:74935416..74935419, - |
| 2.64e-50 | FFCP PHASE1:Hg19::chr12:4690021..4690046,+#_da374a8617e14f1c6182e5bd93187393 | p@chr12:4690021..4690046, + |
| 2.64e-50 | FFCP PHASE2:Hg19::chr12:4690021..4690046,+#_da374a8617e14f1c6182e5bd93187393 | p@chr12:4690021..4690046, + |
| 4.38e-50 | FFCP PHASE2:Hg19::chr17:28534912..28534942,-#_4b4d73886be636c69f56f1bce01ae043 | p@chr17:28534912..28534942, - |
| 4.38e-50 | FFCP PHASE1:Hg19::chr17:28534912..28534942,-#_4b4d73886be636c69f56f1bce01ae043 | p@chr17:28534912..28534942, - |
| 1.03e-46 | FFCP PHASE1:Hg19::chr4:189881560..189881604,-#_a03c75e7afc41bfa3964544ca8dba60a | p@chr4:189881560..189881604, - |
| 1.03e-46 | FFCP PHASE2:Hg19::chr4:189881560..189881604,-#_a03c75e7afc41bfa3964544ca8dba60a | p@chr4:189881560..189881604, - |
| 1.65e-46 | FFCP PHASE1:Hg19::chr22:19748407..19748412,+#_24d848ff131c1904443321abc460b453 | p5@TBX1 |
| 1.65e-46 | FFCP PHASE2:Hg19::chr22:19748407..19748412,+#_24d848ff131c1904443321abc460b453 | p5@TBX1 |
| 5.0e-45 | FFCP PHASE2:Hg19::chr6:168195978..168195989,+#_c5044484dc36e1a5a12f5a89806a5514 | p3@LOC441179 |
| 5.0e-45 | FFCP PHASE1:Hg19::chr6:168195978..168195989,+#_c5044484dc36e1a5a12f5a89806a5514 | p3@LOC441179 |
| 4.49e-44 | FFCP PHASE1:Hg19::chr15:65935213..65935234,+#_1efa79b5d4b3a3d53c508410c0a8c122 | p8@SLC24A1 |
| 4.49e-44 | FFCP PHASE2:Hg19::chr15:65935213..65935234,+#_1efa79b5d4b3a3d53c508410c0a8c122 | p8@SLC24A1 |
| 1.43e-43 | FFCP PHASE2:Hg19::chr5:141337703..141337712,-#_c9c58183d20612cd4d814092976253dc | p4@PCDH12 |
| 1.43e-43 | FFCP PHASE1:Hg19::chr5:141337703..141337712,-#_c9c58183d20612cd4d814092976253dc | p4@PCDH12 |
| 1.31e-40 | FFCP PHASE1:Hg19::chr22:19748074..19748094,-#_ab51308745128867f29723615941586c | p@chr22:19748074..19748094, - |
| 1.31e-40 | FFCP PHASE2:Hg19::chr22:19748074..19748094,-#_ab51308745128867f29723615941586c | p@chr22:19748074..19748094, - |
| 1.23e-38 | FFCP PHASE2:Hg19::chr2:33661536..33661549,+#_858d89fa9c19bbea780cd1f4749b7a11 | p17@RASGRP3 |
| 1.23e-38 | FFCP PHASE1:Hg19::chr2:33661536..33661549,+#_858d89fa9c19bbea780cd1f4749b7a11 | p17@RASGRP3 |
| 2.18e-38 | FFCP PHASE2:Hg19::chr6:49533964..49533975,+#_ff4f784df9ef6c821d1812c619f566f6 | p@chr6:49533964..49533975, + |
| 2.18e-38 | FFCP PHASE1:Hg19::chr6:49533964..49533975,+#_ff4f784df9ef6c821d1812c619f566f6 | p@chr6:49533964..49533975, + |
| 3.19e-38 | FFCP PHASE2:Hg19::chr6:46922535..46922542,-#_054693851c18fcde0b19ea8b2b3de3af | p9@GPR116 |
| 3.19e-38 | FFCP PHASE1:Hg19::chr6:46922535..46922542,-#_054693851c18fcde0b19ea8b2b3de3af | p9@GPR116 |
| 2.08e-36 | FFCP PHASE1:Hg19::chr10:3477893..3477912,-#_2535f10b6cce75910875221f75287ec8 | p@chr10:3477893..3477912, - |
| 2.08e-36 | FFCP PHASE1:Hg19::chr6:84849274..84849294,+#_2535f10b6cce75910875221f75287ec8 | p@chr6:84849274..84849294, + |
| 2.08e-36 | FFCP PHASE2:Hg19::chr10:3477893..3477912,-#_2535f10b6cce75910875221f75287ec8 | p@chr10:3477893..3477912, - |
| 2.08e-36 | FFCP PHASE2:Hg19::chr6:84849274..84849294,+#_2535f10b6cce75910875221f75287ec8 | p@chr6:84849274..84849294, + |
| 3.94e-34 | FFCP PHASE2:Hg19::chr3:30560368..30560379,+#_592bca6f814299e7a2a6d3569e55d615 | p@chr3:30560368..30560379, + |
| 3.94e-34 | FFCP PHASE1:Hg19::chr3:30560368..30560379,+#_592bca6f814299e7a2a6d3569e55d615 | p@chr3:30560368..30560379, + |
| 5.51e-34 | FFCP PHASE1:Hg19::chr4:144507245..144507268,-#_068aca454215d9348a3a0962704d0799 | p@chr4:144507245..144507268, - |
| 5.51e-34 | FFCP PHASE2:Hg19::chr4:144507245..144507268,-#_068aca454215d9348a3a0962704d0799 | p@chr4:144507245..144507268, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:4823046..4823055,-#_630d283ad6962905d9968064e4077dbe | p@chr10:4823046..4823055, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr15:65398647..65398656,-#_630d283ad6962905d9968064e4077dbe | p3@UBAP1L |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:4823046..4823055,-#_630d283ad6962905d9968064e4077dbe | p@chr10:4823046..4823055, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr15:65398647..65398656,-#_630d283ad6962905d9968064e4077dbe | p3@UBAP1L |
| 6.51e-34 | FFCP PHASE2:Hg19::chr1:47183850..47183861,-#_db9661da22ac980db13af07d3b5538b2 | p12@KIAA0494 |
| 6.51e-34 | FFCP PHASE1:Hg19::chr1:47183850..47183861,-#_db9661da22ac980db13af07d3b5538b2 | p12@KIAA0494 |
| 6.76e-34 | FFCP PHASE2:Hg19::chr1:228290095..228290116,-#_e7b888f071000069b9ed92d725d7aa53 | p@chr1:228290095..228290116, - |
| 6.76e-34 | FFCP PHASE1:Hg19::chr1:228290095..228290116,-#_e7b888f071000069b9ed92d725d7aa53 | p@chr1:228290095..228290116, - |
| 7.7e-34 | FFCP PHASE1:Hg19::chr19:47231566..47231577,-#_ec3cc45754639cbac5922b75fc22c669 | p@chr19:47231566..47231577, - |
| 7.7e-34 | FFCP PHASE1:Hg19::chr22:19746577..19746611,+#_ec3cc45754639cbac5922b75fc22c669 | p@chr22:19746577..19746611, + |
| 7.7e-34 | FFCP PHASE2:Hg19::chr19:47231566..47231577,-#_ec3cc45754639cbac5922b75fc22c669 | p@chr19:47231566..47231577, - |
| 7.7e-34 | FFCP PHASE2:Hg19::chr22:19746577..19746611,+#_ec3cc45754639cbac5922b75fc22c669 | p@chr22:19746577..19746611, + |
| 7.7e-34 | FFCP PHASE1:Hg19::chr17:65990349..65990362,-#_ec3cc45754639cbac5922b75fc22c669 | p@chr17:65990349..65990362, - |
| 7.7e-34 | FFCP PHASE2:Hg19::chr17:65990349..65990362,-#_ec3cc45754639cbac5922b75fc22c669 | p@chr17:65990349..65990362, - |
| 8.46e-34 | FFCP PHASE1:Hg19::chr4:183399811..183399829,+#_efa1c0e1406371e9da79f78c08d6df60 | p@chr4:183399811..183399829, + |
| 8.46e-34 | FFCP PHASE2:Hg19::chr4:183399811..183399829,+#_efa1c0e1406371e9da79f78c08d6df60 | p@chr4:183399811..183399829, + |
| 9.1e-34 | FFCP PHASE1:Hg19::chr7:107332367..107332379,+#_20ed3bbe53fd25306e51f03513f68c6e | p3@SLC26A4 |
| 9.1e-34 | FFCP PHASE2:Hg19::chr7:107332367..107332379,+#_20ed3bbe53fd25306e51f03513f68c6e | p3@SLC26A4 |
| 2.58e-33 | FFCP PHASE2:Hg19::chr2:71730376..71730412,+#_a85ca138a023be5cb70079350a616f18 | p@chr2:71730376..71730412, + |
| 2.58e-33 | FFCP PHASE1:Hg19::chr2:71730376..71730412,+#_a85ca138a023be5cb70079350a616f18 | p@chr2:71730376..71730412, + |
| 6.66e-33 | FFCP PHASE2:Hg19::chr9:139553916..139553927,+#_7fe594ec69492002e68eec6d71107279 | p@chr9:139553916..139553927, + |
| 6.66e-33 | FFCP PHASE1:Hg19::chr9:139553916..139553927,+#_7fe594ec69492002e68eec6d71107279 | p@chr9:139553916..139553927, + |
| 2.17e-32 | FFCP PHASE1:Hg19::chr10:3466752..3466759,-#_fd4ccdee251600f95d5df587406646de | p@chr10:3466752..3466759, - |
| 2.17e-32 | FFCP PHASE2:Hg19::chr10:3466752..3466759,-#_fd4ccdee251600f95d5df587406646de | p@chr10:3466752..3466759, - |
| 2.68e-32 | FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_def83c1feffc419589acb2180ed17c6f | p@chr12:96841308..96841312, + |
| 2.68e-32 | FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_def83c1feffc419589acb2180ed17c6f | p@chr12:96841308..96841312, + |
| 2.66e-31 | FFCP PHASE1:Hg19::chr12:120142354..120142372,-#_609d611eee1c184811f45719e5e1dbe2 | p@chr12:120142354..120142372, - |
| 2.66e-31 | FFCP PHASE2:Hg19::chr12:120142354..120142372,-#_609d611eee1c184811f45719e5e1dbe2 | p@chr12:120142354..120142372, - |
| 6.66e-31 | FFCP PHASE2:Hg19::chr1:61415107..61415136,-#_0eb0d0b4c8350a06e14289753fbf1d23 | p@chr1:61415107..61415136, - |
| 6.66e-31 | FFCP PHASE1:Hg19::chr1:61415107..61415136,-#_0eb0d0b4c8350a06e14289753fbf1d23 | p@chr1:61415107..61415136, - |
| 9.03e-31 | FFCP PHASE2:Hg19::chr15:89736241..89736275,+#_15ab8ba1ba2344041da671d0a02d5352 | p@chr15:89736241..89736275, + |
| 9.03e-31 | FFCP PHASE1:Hg19::chr15:89736241..89736275,+#_15ab8ba1ba2344041da671d0a02d5352 | p@chr15:89736241..89736275, + |
| 4.84e-30 | FFCP PHASE2:Hg19::chr10:4822908..4822927,-#_97e9db1aaa43b0342b746186222ec5f6 | p@chr10:4822908..4822927, - |
| 4.84e-30 | FFCP PHASE1:Hg19::chr10:4822908..4822927,-#_97e9db1aaa43b0342b746186222ec5f6 | p@chr10:4822908..4822927, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Any of the tiny blood vessels connecting the arterioles to the venules.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
