UBERON:0004199: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=S-shaped body | |name=S-shaped body | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 17:45, 12 September 2014
Name: | S-shaped body | |
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Namespace: | FANTOM | |
Definition: | "The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron" [GO:0072050] | |
Xrefs: |
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Synonyms: | "stage II nephron" EXACT [1] | |
Comments: | TODO |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0010532(primitive nephron) |
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develops_from: | UBERON:0004198(comma-shaped body) |
Children
develops from: | UBERON:0001230 (glomerular capsule) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004199 (S-shaped body), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data