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UBERON:0004256: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=hindlimb zeugopod muscle
|name=hindlimb zeugopod muscle
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0003823;;UBERON:0006067
|part_of=UBERON:0003823;;UBERON:0006067

Latest revision as of 17:45, 12 September 2014

Name:hindlimb zeugopod muscle
Namespace:FANTOM
Definition:"A muscle organ that is part of a hindlimb zeugopod (lower leg) [Obol]." [OBOL:automatic]
Xrefs:
links:

FMA:22471

MA:0000678
Synonyms: "lower leg muscle" EXACT [MA:0000678]
"muscle of leg" RELATED INCONSISTENT [FMA:22471]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001383(muscle of leg)
part_of:UBERON:0003823(hindlimb zeugopod),UBERON:0006067(musculature of hindlimb zeugopod)



Children

is a:UBERON:0001389 (soleus muscle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004256 (hindlimb zeugopod muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data