UBERON:0007846: Difference between revisions
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|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=dense regular | |name=dense regular connective tissue | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 18:03, 12 September 2014
Name: | dense regular connective tissue | |
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Namespace: | FANTOM | |
Definition: | "Regular connective tissue, the intercellular matrix of which consists predominantly of collagen fiber bundles arranged in parallel arrays[FMA]. Connective tissue that is dominated by collagen fibres organized into a definitive pattern (e.g., parallel to one another), with comparatively fewer cells (mostly fibroblasts)[VSAO]" [FMA:64781, VSAO:0000050] | |
Xrefs: |
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Synonyms: |
"dense fibrous connective tissue" EXACT [FMA:64781] "dense regular collagenous connective tissue" EXACT [FMA:64781] "dense regular connective tissue" EXACT [FMA:64781, VSAO:0000050] "typus regularis (textus connectivus collagenosus compactus)" EXACT [FMA:64781] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0007845(regular connective tissue),UBERON:0011823(dense connective tissue) |
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Children
is a: | UBERON:0000043 (tendon),UBERON:0000211 (ligament) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10264-104D3
- 10267-104D6
- 10292-104G4 (achilles tendon, donor2)
- 10295-104G7 (cruciate ligament, donor2)
- 10320-105A5
- 10323-105A8
- 11763-123H8 (tenocyte, donor1)
- 11765-123I1 (tenocyte, donor2)
- 11768-123I4 (tenocyte, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007846 (dense regular connective tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Connective tissue that is dominated by collagen fibres organized into a definitive pattern (e.g., parallel to one another), with comparatively fewer cells (mostly fibroblasts).[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.