UBERON:0007914: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=head or neck bone | |name=head or neck bone | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0007811 | |part_of=UBERON:0007811 | ||
Latest revision as of 18:03, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001474(bone element) |
|---|---|
| part_of: | UBERON:0007811(craniocervical region) |
Children
| is a: | UBERON:0003457 (head bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007914 (head or neck bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81b | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81b | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6 | p@chr8:57353655..57353662, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_c7b014f591b3f452f653d0547dd682df | p@chr11:4689837..4689845, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_c7b014f591b3f452f653d0547dd682df | p@chr8:94180607..94180619, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_c7b014f591b3f452f653d0547dd682df | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_c7b014f591b3f452f653d0547dd682df | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_c7b014f591b3f452f653d0547dd682df | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_c7b014f591b3f452f653d0547dd682df | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_c7b014f591b3f452f653d0547dd682df | p4@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_c7b014f591b3f452f653d0547dd682df | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_c7b014f591b3f452f653d0547dd682df | p@chr5:144115382..144115389, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_c7b014f591b3f452f653d0547dd682df | p2@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_c7b014f591b3f452f653d0547dd682df | p@chr13:58283583..58283607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_c7b014f591b3f452f653d0547dd682df | p@chr8:13414289..13414295, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_c7b014f591b3f452f653d0547dd682df | p@chr12:13572961..13572974, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:172843813..172843834, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_c7b014f591b3f452f653d0547dd682df | p@chr14:102297747..102297765, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_c7b014f591b3f452f653d0547dd682df | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:65641741..65641748, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_c7b014f591b3f452f653d0547dd682df | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_c7b014f591b3f452f653d0547dd682df | p41@Cacnb2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_c7b014f591b3f452f653d0547dd682df | p1@Otog |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_c7b014f591b3f452f653d0547dd682df | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_c7b014f591b3f452f653d0547dd682df | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_c7b014f591b3f452f653d0547dd682df | p@chr17:27252925..27252939, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:89215333..89215341, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_c7b014f591b3f452f653d0547dd682df | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_c7b014f591b3f452f653d0547dd682df | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_c7b014f591b3f452f653d0547dd682df | p@chr11:94371127..94371139, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_c7b014f591b3f452f653d0547dd682df | p2@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_c7b014f591b3f452f653d0547dd682df | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_c7b014f591b3f452f653d0547dd682df | p2@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_c7b014f591b3f452f653d0547dd682df | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_c7b014f591b3f452f653d0547dd682df | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_c7b014f591b3f452f653d0547dd682df | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_c7b014f591b3f452f653d0547dd682df | p4@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_c7b014f591b3f452f653d0547dd682df | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_c7b014f591b3f452f653d0547dd682df | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_c7b014f591b3f452f653d0547dd682df | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_c7b014f591b3f452f653d0547dd682df | p6@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_c7b014f591b3f452f653d0547dd682df | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_c7b014f591b3f452f653d0547dd682df | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_c7b014f591b3f452f653d0547dd682df | p3@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_c7b014f591b3f452f653d0547dd682df | p3@Ptprq |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_c7b014f591b3f452f653d0547dd682df | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_c7b014f591b3f452f653d0547dd682df | p1@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_c7b014f591b3f452f653d0547dd682df | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_c7b014f591b3f452f653d0547dd682df | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_c7b014f591b3f452f653d0547dd682df | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_c7b014f591b3f452f653d0547dd682df | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_c7b014f591b3f452f653d0547dd682df | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_c7b014f591b3f452f653d0547dd682df | p1@Otol1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_c7b014f591b3f452f653d0547dd682df | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_c7b014f591b3f452f653d0547dd682df | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_c7b014f591b3f452f653d0547dd682df | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_c7b014f591b3f452f653d0547dd682df | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_c7b014f591b3f452f653d0547dd682df | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_c7b014f591b3f452f653d0547dd682df | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_c7b014f591b3f452f653d0547dd682df | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_c7b014f591b3f452f653d0547dd682df | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_c7b014f591b3f452f653d0547dd682df | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_c7b014f591b3f452f653d0547dd682df | p1@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_c7b014f591b3f452f653d0547dd682df | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_c7b014f591b3f452f653d0547dd682df | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_c7b014f591b3f452f653d0547dd682df | p1@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_c7b014f591b3f452f653d0547dd682df | p3@Epyc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_c7b014f591b3f452f653d0547dd682df | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_c7b014f591b3f452f653d0547dd682df | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_c7b014f591b3f452f653d0547dd682df | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_c7b014f591b3f452f653d0547dd682df | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_c7b014f591b3f452f653d0547dd682df | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_c7b014f591b3f452f653d0547dd682df | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_c7b014f591b3f452f653d0547dd682df | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_c7b014f591b3f452f653d0547dd682df | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_c7b014f591b3f452f653d0547dd682df | p2@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_c7b014f591b3f452f653d0547dd682df | p1@Otol1 |
