FFCP PHASE1:Hg19::chr12:54982916..54982965,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5502 | |EntrezGene=entrezgene:5502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=9286 | |HGNC=HGNC:9286 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q13522,E7ENB4 | |UniProt=uniprot:Q13522,uniprot:E7ENB4 | ||
|association_with_transcript=-473bp_to_ENST00000257905,ENST00000379690,NM_006741,uc001sgg.2_5end | |association_with_transcript=-473bp_to_ENST00000257905,ENST00000379690,NM_006741,uc001sgg.2_5end | ||
|cluster_id=chr12:54982916..54982965,- | |||
|coexpression_cluster_id=C63 | |coexpression_cluster_id=C63 | ||
|description=CAGE_peak_5_at_PPP1R1A_5end | |description=CAGE_peak_5_at_PPP1R1A_5end |
Revision as of 10:06, 24 July 2015
Short description: | p5@PPP1R1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPP1R1A_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -473bp_to_ENST00000257905, ENST00000379690, NM_006741, uc001sgg.2_5end |
EntrezGene: | 5502 |
HGNC: | 9286 |
UniProt: | Q13522E7ENB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@PPP1R1A |
---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 5.56e-26 | 2 |
sympathetic nervous system | 2.94e-11 | 5 |
autonomic nervous system | 2.94e-11 | 5 |
peripheral nervous system | 7.91e-07 | 8 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 5.56e-26 | 2 |
neurofibroma | 5.56e-26 | 2 |
neuroectodermal tumor | 6.99e-21 | 10 |
peripheral nervous system neoplasm | 8.00e-18 | 3 |
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |
neuroendocrine tumor | 1.32e-09 | 6 |
Showing 1 to 7 of 7 entries