FFCP PHASE1:Hg19::chr4:120549931..120549938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=8654 | |EntrezGene=entrezgene:8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8784 | |HGNC=HGNC:8784 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=O76074 | |UniProt=uniprot:O76074 | ||
|association_with_transcript=42bp_to_NM_001083,uc003idh.2_5end | |association_with_transcript=42bp_to_NM_001083,uc003idh.2_5end | ||
|cluster_id=chr4:120549931..120549938,- | |||
|coexpression_cluster_id=C1933 | |coexpression_cluster_id=C1933 | ||
|description=CAGE_peak_21_at_PDE5A_5end | |description=CAGE_peak_21_at_PDE5A_5end | ||
Revision as of 01:19, 30 July 2015
| Short description: | p21@PDE5A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_21_at_PDE5A_5end |
| Coexpression cluster: | C1933_glioblastoma_small_Prostate_Smooth_rhabdomyosarcoma_normal_sacrococcigeal |
| Association with transcript: | 42bp_to_NM_001083, uc003idh.2_5end |
| EntrezGene: | 8654 |
| HGNC: | 8784 |
| UniProt: | O76074 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p21@PDE5A |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| prostate stromal cell | 1.80e-38 | 3 |
| smooth muscle cell of prostate | 1.78e-15 | 2 |
| enteric smooth muscle cell | 9.90e-11 | 3 |
| smooth muscle cell of large intestine | 9.90e-11 | 3 |
| smooth muscle cell of colon | 9.90e-11 | 3 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| prostate gland | 8.35e-24 | 11 |
| male accessory sex gland | 8.35e-24 | 11 |
| embryonic cloacal epithelium | 8.35e-24 | 11 |
| epithelium of hindgut | 8.35e-24 | 11 |
| urogenital sinus epithelium | 8.35e-24 | 11 |
| prostate bud | 8.35e-24 | 11 |
| prostate field | 8.35e-24 | 11 |
| sex gland | 6.79e-22 | 12 |
| male reproductive gland | 6.79e-22 | 12 |
| cloaca | 6.89e-19 | 14 |
Showing 1 to 10 of 23 entries
