FFCP PHASE1:Hg19::chr6:56480719..56480734,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:56480719..56480734,- | |||
|coexpression_cluster_id=C457 | |coexpression_cluster_id=C457 | ||
|description=CAGE_peak_at_chr6:56480719..56480734,- | |description=CAGE_peak_at_chr6:56480719..56480734,- | ||
Latest revision as of 02:29, 31 July 2015
| Short description: | p@chr6:56480719..56480734, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr6:56480719..56480734, - |
| Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr6:56480719..56480734- |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| acinar cell of salivary gland | 1.21e-46 | 3 |
| acinar cell | 2.53e-28 | 5 |
| protein secreting cell | 9.87e-24 | 6 |
| endo-epithelial cell | 1.05e-22 | 42 |
| epithelial cell of alimentary canal | 2.58e-19 | 20 |
| buccal mucosa cell | 6.47e-17 | 1 |
| endothelial cell of viscerocranial mucosa | 6.47e-17 | 1 |
| keratinized cell of the oral mucosa | 6.47e-17 | 1 |
| endodermal cell | 2.73e-16 | 58 |
| mammary gland epithelial cell | 3.07e-16 | 4 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| saliva-secreting gland | 9.87e-24 | 6 |
| gland of oral region | 9.87e-24 | 6 |
| gland of foregut | 9.87e-24 | 6 |
| oral gland | 9.87e-24 | 6 |
| oral cavity | 9.87e-24 | 6 |
| mammary gland | 3.07e-16 | 4 |
| mammary bud | 3.07e-16 | 4 |
| mammary ridge | 3.07e-16 | 4 |
| mammary placode | 3.07e-16 | 4 |
| gland of gut | 1.61e-14 | 10 |
Showing 1 to 10 of 25 entries
