FFCP PHASE1:Hg19::chr7:27192185..27192209,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=3200 | |EntrezGene=entrezgene:3200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=5104 | |HGNC=HGNC:5104 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000518451_5end | |association_with_transcript=0bp_to_ENST00000518451_5end | ||
|cluster_id=chr7:27192185..27192209,- | |||
|description=CAGE_peak_1_at_HOXA3_5end | |description=CAGE_peak_1_at_HOXA3_5end | ||
|id=chr7:27192185..27192209,- | |id=chr7:27192185..27192209,- | ||
Revision as of 09:03, 31 July 2015
| Short description: | p1@HOXA3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_HOXA3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000518451_5end |
| EntrezGene: | 3200 |
| HGNC: | 5104 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HOXA3 |
|---|
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200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fat cell | 1.79e-10 | 15 |
| kidney tubule cell | 8.68e-08 | 10 |
| nephron tubule epithelial cell | 8.68e-08 | 10 |
| epithelial cell of nephron | 3.69e-07 | 15 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| renal system | 1.87e-11 | 48 |
| cavitated compound organ | 8.99e-11 | 31 |
| urinary system structure | 9.21e-11 | 47 |
| kidney | 5.79e-09 | 26 |
| kidney mesenchyme | 5.79e-09 | 26 |
| upper urinary tract | 5.79e-09 | 26 |
| kidney rudiment | 5.79e-09 | 26 |
| kidney field | 5.79e-09 | 26 |
| mesenchyme | 2.32e-08 | 160 |
| entire embryonic mesenchyme | 2.32e-08 | 160 |
Showing 1 to 10 of 26 entries
