FFCP PHASE1:Mm9::chr19:26681865..26681900,+: Difference between revisions
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{{FFCP|EntrezGene=67155|HGNC=|MCL_coexpression_id=1|UniProt=E9QAB8|association_with_transcript=105bp_to_ENSMUST00000099537_5end|description=CAGE_peak_6_at_Smarca2_5end|id=chr19:26681865..26681900,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.59e-09!94;UBERON:0007811!9.21e-09!86;UBERON:0007023!9.70e-09!51;UBERON:0000955!4.28e-08!50;UBERON:0006238!4.28e-08!50;UBERON:0002021!9.74e-08!10;UBERON:0000411!9.74e-08!10;UBERON:0001950!9.74e-08!10;UBERON:0002616!9.81e-08!49;UBERON:0000064!5.99e-07!99;UBERON:0001049!7.32e-07!52;UBERON:0005068!7.32e-07!52;UBERON:0006241!7.32e-07!52;UBERON:0007135!7.32e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.56e-08,51;UBERON:0002021,8.17e-08,10;UBERON:0000411,8.17e-08,10;UBERON:0001950,8.17e-08,10;UBERON:0000073,1.11e-07,54|phase1_expression=1.92178616525753,3.48975407639361,2.27499619694768,3.32710632437513,3.00537437967808,4.36486106970913,4.20502753071946,2.96983643915625,2.111830832275,2.34064526321993,0.513653904676515,0.319088635981346,6.50562773738582,5.42006494997784,1.66554880907831,1.01237633694913,0.699561878128147,2.05050407482854,2.19383093769182,1.69755860719212,4.59233766815777,0,0,2.71987118748791,2.06468352960453,2.8711598205751,2.15380998079537,1.72376986148711,0.950117097281869,1.51218077855958,1.33038306393183,1.27006134691926,1.84519436275371,15.8481681015439,1.73310971850765,1.99481574430191,1.02084678131185,0,0,0.523523743973798,1.17646297606203,0,0.485510353031154,2.51793635951155,2.63580021170738,0.550640256485045,2.34717403304412,0.436050312760893,1.75748946187577,1.94429899074283,1.53985063787899,1.43752564364972,0.838913030288682,6.5282592781021,10.0828139742739,2.31533492432352,2.0057340795713,3.09403255366465,1.61853168687678,1.05798195854407,2.53532561402472,0.677689064138264,4.4464739805557,0.449949858640699,1.97773272513395,0.7104801149461,0.599200221036809,1.53687322128622,0.725827286159344,0.945041568321835,0.841299845405528,2.28520787523043,0.883474163806454,1.95985278743926,1.0543001812006,2.75765635983006,38.540558349786,22.7283461791634,29.9532739849675,1.18697658957174,1.18933936683133,1.56274011167028,15.355064945076,13.5063026407603,14.2102370432433,4.41942878210502,3.84403538157578,1.86399445825301,0.302904773332736,0.755715601067855,4.05810284182349,1.72084775396277,0,1.61910957491345,1.94932925234301,3.13618820968135,2.94933282276679,0,0.259786004602869,0.70667914902068,0.281686839553361,11.5493829672886,30.5766287647975,28.4426681261332,1.29894624606728,0,0,2.39786147410026,3.36619248741323,2.67195850316685,0.520455980298408,0.608930956624282,0.230615497256059,0.452167921657868,1.41106448562846,2.51333182659351,2.22475470960936,1.73519228303894,2.65383165584962,2.58826959915855,1.32504911076236,2.42437626567611,3.72783522436244,10.8328894894272,8.3778682725382,1.53274233125155,1.91704199209472,2.39961092397363,1.27070227073065,16.3271796951257,13.7250180845588,3.5183218591602,12.1677024134594,10.2286182932132,19.3242881440391,12.9793010454206,1.32391173005411,1.61729061793121,2.77995034277042,6.73413938836717,0.780722657776222,0.459804208866946,1.26043490863744,1.80845781402858,0.680364991513279,0.896796041993948,0.655912071918102,6.20888089773638,0.431135985865684,1.70195472151037,4.57472922826267,3.72632745126877,4.44875598760957,1.74126083261083,3.2925141825271,0.995171334092466,1.40442637462647,3.3455227924913,1.13665399758237,1.24275463521301,0.703578179943289,1.08037236876609,0.946978942340841,0.983821158737019,0.617068451549513,0.697601834251224,0.804820204198858,1.05088808130453,1.6455984991348,0.985004784474571,1.54030738137126,1.31579988682799,3.07370161407471,1.61047702512446,17.8746456279508,2.57261530948211,0.991256348951394,1.05780226665418,0.853153002140936,1.62565670302307,1.15980715189884,1.81515172161008,1.55664630691409,3.04361001780095,2.37264530772256,1.64698954724011,2.01068167040216,1.59165177632921,2.53453313254856,0.898819408654221,1.94524244887225,1.7922714592893,0.379335801906163,1.14248512609729,2.25415471346161,1.4255592949172,0.969762435838129,1.54298803758701,1.26473074248515,1.77132177575523,1.41298855057237,0.863780147452604,4.15033677922008,0.667380422864376,0.786235980452812,0.224862112384854,0.608580364165509,0.241177159752417,0.25462585178142,1.15078454980324,0.324270453550071,0.274561413188081,1.43768206527355,0.372140947668503,1.24815069245824,1.76805214562978,1.79397413521912,1.4473305640901,4.24932337383191,1.13694847062291,0.977789858652155,0.848725428875941,2.11221223459652,1.34005005953453,3.09456733151818,2.73187107000918,4.41378403497335,2.21464689648775,4.78364305972461,3.60499292374624,2.41758974612254,1.88043776155965,1.50791283939272,7.07077388964322,2.45882136509518,2.48343071674259,16.0550589987792,11.9555920324047,0.163934945376675,2.01976741763498,0.631016438832513,1.95219372148319,0.861693590931196,1.67278158566786,2.45078541490634,1.6984591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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67155 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QAB8 | |||
|association_with_transcript=105bp_to_ENSMUST00000099537_5end | |||
|cluster_id=chr19:26681865..26681900,+ | |||
|description=CAGE_peak_6_at_Smarca2_5end | |||
|id=chr19:26681865..26681900,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.59e-09!94;UBERON:0007811!9.21e-09!86;UBERON:0007023!9.70e-09!51;UBERON:0000955!4.28e-08!50;UBERON:0006238!4.28e-08!50;UBERON:0002021!9.74e-08!10;UBERON:0000411!9.74e-08!10;UBERON:0001950!9.74e-08!10;UBERON:0002616!9.81e-08!49;UBERON:0000064!5.99e-07!99;UBERON:0001049!7.32e-07!52;UBERON:0005068!7.32e-07!52;UBERON:0006241!7.32e-07!52;UBERON:0007135!7.32e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.56e-08,51;UBERON:0002021,8.17e-08,10;UBERON:0000411,8.17e-08,10;UBERON:0001950,8.17e-08,10;UBERON:0000073,1.11e-07,54 | |||
|phase1_expression=1.92178616525753,3.48975407639361,2.27499619694768,3.32710632437513,3.00537437967808,4.36486106970913,4.20502753071946,2.96983643915625,2.111830832275,2.34064526321993,0.513653904676515,0.319088635981346,6.50562773738582,5.42006494997784,1.66554880907831,1.01237633694913,0.699561878128147,2.05050407482854,2.19383093769182,1.69755860719212,4.59233766815777,0,0,2.71987118748791,2.06468352960453,2.8711598205751,2.15380998079537,1.72376986148711,0.950117097281869,1.51218077855958,1.33038306393183,1.27006134691926,1.84519436275371,15.8481681015439,1.73310971850765,1.99481574430191,1.02084678131185,0,0,0.523523743973798,1.17646297606203,0,0.485510353031154,2.51793635951155,2.63580021170738,0.550640256485045,2.34717403304412,0.436050312760893,1.75748946187577,1.94429899074283,1.53985063787899,1.43752564364972,0.838913030288682,6.5282592781021,10.0828139742739,2.31533492432352,2.0057340795713,3.09403255366465,1.61853168687678,1.05798195854407,2.53532561402472,0.677689064138264,4.4464739805557,0.449949858640699,1.97773272513395,0.7104801149461,0.599200221036809,1.53687322128622,0.725827286159344,0.945041568321835,0.841299845405528,2.28520787523043,0.883474163806454,1.95985278743926,1.0543001812006,2.75765635983006,38.540558349786,22.7283461791634,29.9532739849675,1.18697658957174,1.18933936683133,1.56274011167028,15.355064945076,13.5063026407603,14.2102370432433,4.41942878210502,3.84403538157578,1.86399445825301,0.302904773332736,0.755715601067855,4.05810284182349,1.72084775396277,0,1.61910957491345,1.94932925234301,3.13618820968135,2.94933282276679,0,0.259786004602869,0.70667914902068,0.281686839553361,11.5493829672886,30.5766287647975,28.4426681261332,1.29894624606728,0,0,2.39786147410026,3.36619248741323,2.67195850316685,0.520455980298408,0.608930956624282,0.230615497256059,0.452167921657868,1.41106448562846,2.51333182659351,2.22475470960936,1.73519228303894,2.65383165584962,2.58826959915855,1.32504911076236,2.42437626567611,3.72783522436244,10.8328894894272,8.3778682725382,1.53274233125155,1.91704199209472,2.39961092397363,1.27070227073065,16.3271796951257,13.7250180845588,3.5183218591602,12.1677024134594,10.2286182932132,19.3242881440391,12.9793010454206,1.32391173005411,1.61729061793121,2.77995034277042,6.73413938836717,0.780722657776222,0.459804208866946,1.26043490863744,1.80845781402858,0.680364991513279,0.896796041993948,0.655912071918102,6.20888089773638,0.431135985865684,1.70195472151037,4.57472922826267,3.72632745126877,4.44875598760957,1.74126083261083,3.2925141825271,0.995171334092466,1.40442637462647,3.3455227924913,1.13665399758237,1.24275463521301,0.703578179943289,1.08037236876609,0.946978942340841,0.983821158737019,0.617068451549513,0.697601834251224,0.804820204198858,1.05088808130453,1.6455984991348,0.985004784474571,1.54030738137126,1.31579988682799,3.07370161407471,1.61047702512446,17.8746456279508,2.57261530948211,0.991256348951394,1.05780226665418,0.853153002140936,1.62565670302307,1.15980715189884,1.81515172161008,1.55664630691409,3.04361001780095,2.37264530772256,1.64698954724011,2.01068167040216,1.59165177632921,2.53453313254856,0.898819408654221,1.94524244887225,1.7922714592893,0.379335801906163,1.14248512609729,2.25415471346161,1.4255592949172,0.969762435838129,1.54298803758701,1.26473074248515,1.77132177575523,1.41298855057237,0.863780147452604,4.15033677922008,0.667380422864376,0.786235980452812,0.224862112384854,0.608580364165509,0.241177159752417,0.25462585178142,1.15078454980324,0.324270453550071,0.274561413188081,1.43768206527355,0.372140947668503,1.24815069245824,1.76805214562978,1.79397413521912,1.4473305640901,4.24932337383191,1.13694847062291,0.977789858652155,0.848725428875941,2.11221223459652,1.34005005953453,3.09456733151818,2.73187107000918,4.41378403497335,2.21464689648775,4.78364305972461,3.60499292374624,2.41758974612254,1.88043776155965,1.50791283939272,7.07077388964322,2.45882136509518,2.48343071674259,16.0550589987792,11.9555920324047,0.163934945376675,2.01976741763498,0.631016438832513,1.95219372148319,0.861693590931196,1.67278158566786,2.45078541490634,1.69845918473299,2.42886421004937,1.46127928955656,0.790575555893047,4.4984984299053,2.83880170416537,1.6025904330053,1.95464351224291,4.12425307431339,3.98235415019888,0.728341908464944,0.604647113929502,1.32023555829129,1.18120757152309,0.922305443831782,1.29214146584111,2.18120237686503,2.49548164869305,2.52829406348653,3.16255825724996,3.09406629744561,8.85142974959849,1.08036656418786,0.905510786479282,1.71469628025274,1.06404140185364,1.60531935841864,1.97458824722545,0.304464949114599,0.704015124191131,2.75381692122966,3.74898276693435,4.9465875882444,2.58343082713449,1.74907482291652,0.477489376012546,1.64140899745061,2.33184669303881,15.9465759729038,1.53783792718067,2.06386867963222,1.11116716421827,0.376736914009382,1.36694227721025,0.228778173206523,3.90950388985867,3.49878630809145,3.86959926652387,1.90934123603023,1.26534397432454,2.64315307264903,1.18805874903981,1.25452977608681,1.31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| |||
|short_description=p6@Smarca2 | |||
}} |
Revision as of 19:59, 3 August 2015
Short description: | p6@Smarca2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Smarca2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 105bp_to_ENSMUST00000099537_5end |
EntrezGene: | 67155 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.56e-08 | 51 |
occipital lobe | 8.17e-08 | 10 |
visual cortex | 8.17e-08 | 10 |
neocortex | 8.17e-08 | 10 |
regional part of nervous system | 1.11e-07 | 54 |