FFCP PHASE1:Mm9::chr11:75281663..75281686,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=380712|HGNC=|MCL_coexpression_id=28|UniProt=Q8VC26|association_with_transcript=82bp_to_ENSMUST00000043598,ENSMUST00000108435,NM_027249,uc007kdw.1,uc011xzl.1_5end|description=CAGE_peak_2_at_Tlcd2_5end|id=chr11:75281663..75281686,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.49e-09,5;CL:0000066,8.97e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!5.12e-07!47;UBERON:0000160!5.30e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.86e-11,22;UBERON:0007499,2.86e-11,22;UBERON:0006925,2.86e-11,22;UBERON:0009497,2.86e-11,22;UBERON:0000015,2.86e-11,22;UBERON:0002423,2.86e-11,22;UBERON:0006235,2.86e-11,22;UBERON:0008835,2.86e-11,22;UBERON:0003894,2.86e-11,22;UBERON:0004161,2.86e-11,22;UBERON:0008836,2.86e-11,22;UBERON:0009854,1.25e-10,23;UBERON:0009856,1.25e-10,23;UBERON:0002365,1.66e-09,25;UBERON:0002330,1.66e-09,25;UBERON:0003914,1.77e-08,47;UBERON:0000344,4.22e-07,15;UBERON:0000160,7.73e-07,31|phase1_expression=0.80074423552397,4.53668029931169,1.36499771816861,1.20985684522732,0,0.839396359559449,1.40167584357315,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.510259740906419,0,0,4.7997726838022,8.02932483735095,2.29692785646008,2.15380998079537,3.01659725760245,0.950117097281869,1.26015064879965,1.10865255327652,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.367093504323363,0,0,0.439372365468944,0.194429899074283,0.979904951377538,0,0,0,0,0.771778308107841,1.71920063963254,1.54701627683233,0,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831287161174641,4.34796733052517,3.44169550792555,2.03991400112325,8.63525106620507,5.19821133958135,6.72040330646003,4.0728881838208,0.170430322578058,0,0,1.54927761754349,0,0,0,0.216491041011214,0,0,3.19714863213368,0,0.29688427812965,1.21439728736295,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.879666139307728,0,0.433798070759735,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0.255457055208591,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0.622034853050465,0.252722758433675,112.79683475515,0.650602214813519,0,0.720248519221397,0.150704817835715,0.544291993210623,0.12811372028485,0.187403449119458,36.9945820156792,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0,1.19420560091096,0,0.257347907114715,0,0,0.469052119962192,0.540186184383045,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0.329119699826961,1.14917224855367,1.37816976227955,0.438599962275997,2.19550115291051,1.07365135008297,0,0,1.32167513193519,3.96675849995316,0.853153002140936,0.464473343720877,0.128867461322093,0,0.22237804384487,1.14135375667535,0,0.988193728344065,2.26201687920243,2.58643413653496,3.8992817423824,1.79763881730844,0.864552199498777,0.398282546508734,0.569003702859245,0.456994050438915,1.1270773567308,0.814605311381257,0.193952487167626,0.140271639780637,0.569128834118316,0.147610147979602,0.156998727841375,0.246794327843601,4.44678940630723,0,0,0.674586337154561,0.202860121388503,0,0.50925170356284,0,0.324270453550071,1.09824565275233,0,1.86070473834252,5.30464044294753,11.8712072635143,8.7904732625737,2.41221760681684,0.184753190166605,0.189491411770485,0.325929952884052,0.509235257325564,0,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0,0,0.117211686592203,0,1.26235463602186,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0,0,0.851640511249612,0.712262414669021,0.325773918707152,0.329940245945071,0,1.21390318077491,1.81394134178851,0.377210159511796,0.295301892880773,0.922305443831782,0.775284879504663,1.09060118843252,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.540183282093931,0.388076051348264,1.07168517515796,0.709360934569094,0,0.164549020602121,0.608929898229199,0,0,0,3.2977250588296,0.484393280087717,1.80938774784468,3.22305328808468,2.46211349617592,1.7488850197791,0,0,0,0.370389054739423,0.376736914009382,0,0,0,0.279902904647316,0,0,0.790839983952838,0,0.216010681643603,0.209088296014469,0.436725127492355,0.134864346384821,0.909188012978695,0,0.259229946583586,0,0,0.897099276263873,0.165458490457098,0.777804753376191,0.904118764344118,0.675824501963113,0.704143431874524,0.5208175393758,0.314578033277133,0.483168241652012,0.576060012515731,0.632022241256357,0.202725215290164,0.924398614483445,0.25984164595559,0.358053391334963,0,0,0.590758108698309,0.201932899896295,0.15241361331,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,0,0,0,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0,0.581385666529314,0.376437521661322,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0.192906610981141,0,0.233931608445408,0.644613162144895,0.382576664137687,1.32354851471709,0.231867835620421|short_description=p2@Tlcd2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:380712 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VC26 | |||
|association_with_transcript=82bp_to_ENSMUST00000043598,ENSMUST00000108435,NM_027249,uc007kdw.1,uc011xzl.1_5end | |||
|cluster_id=chr11:75281663..75281686,+ | |||
|description=CAGE_peak_2_at_Tlcd2_5end | |||
|id=chr11:75281663..75281686,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.49e-09,5;CL:0000066,8.97e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.12e-07!47;UBERON:0000160!5.30e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.86e-11,22;UBERON:0007499,2.86e-11,22;UBERON:0006925,2.86e-11,22;UBERON:0009497,2.86e-11,22;UBERON:0000015,2.86e-11,22;UBERON:0002423,2.86e-11,22;UBERON:0006235,2.86e-11,22;UBERON:0008835,2.86e-11,22;UBERON:0003894,2.86e-11,22;UBERON:0004161,2.86e-11,22;UBERON:0008836,2.86e-11,22;UBERON:0009854,1.25e-10,23;UBERON:0009856,1.25e-10,23;UBERON:0002365,1.66e-09,25;UBERON:0002330,1.66e-09,25;UBERON:0003914,1.77e-08,47;UBERON:0000344,4.22e-07,15;UBERON:0000160,7.73e-07,31 | |||
|phase1_expression=0.80074423552397,4.53668029931169,1.36499771816861,1.20985684522732,0,0.839396359559449,1.40167584357315,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.510259740906419,0,0,4.7997726838022,8.02932483735095,2.29692785646008,2.15380998079537,3.01659725760245,0.950117097281869,1.26015064879965,1.10865255327652,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.367093504323363,0,0,0.439372365468944,0.194429899074283,0.979904951377538,0,0,0,0,0.771778308107841,1.71920063963254,1.54701627683233,0,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831287161174641,4.34796733052517,3.44169550792555,2.03991400112325,8.63525106620507,5.19821133958135,6.72040330646003,4.0728881838208,0.170430322578058,0,0,1.54927761754349,0,0,0,0.216491041011214,0,0,3.19714863213368,0,0.29688427812965,1.21439728736295,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.879666139307728,0,0.433798070759735,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0.255457055208591,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0.622034853050465,0.252722758433675,112.79683475515,0.650602214813519,0,0.720248519221397,0.150704817835715,0.544291993210623,0.12811372028485,0.187403449119458,36.9945820156792,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0,1.19420560091096,0,0.257347907114715,0,0,0.469052119962192,0.540186184383045,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0.329119699826961,1.14917224855367,1.37816976227955,0.438599962275997,2.19550115291051,1.07365135008297,0,0,1.32167513193519,3.96675849995316,0.853153002140936,0.464473343720877,0.128867461322093,0,0.22237804384487,1.14135375667535,0,0.988193728344065,2.26201687920243,2.58643413653496,3.8992817423824,1.79763881730844,0.864552199498777,0.398282546508734,0.569003702859245,0.456994050438915,1.1270773567308,0.814605311381257,0.193952487167626,0.140271639780637,0.569128834118316,0.147610147979602,0.156998727841375,0.246794327843601,4.44678940630723,0,0,0.674586337154561,0.202860121388503,0,0.50925170356284,0,0.324270453550071,1.09824565275233,0,1.86070473834252,5.30464044294753,11.8712072635143,8.7904732625737,2.41221760681684,0.184753190166605,0.189491411770485,0.325929952884052,0.509235257325564,0,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,0.491764273019036,0,0,0.117211686592203,0,1.26235463602186,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0,0,0.851640511249612,0.712262414669021,0.325773918707152,0.329940245945071,0,1.21390318077491,1.81394134178851,0.377210159511796,0.295301892880773,0.922305443831782,0.775284879504663,1.09060118843252,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.540183282093931,0.388076051348264,1.07168517515796,0.709360934569094,0,0.164549020602121,0.608929898229199,0,0,0,3.2977250588296,0.484393280087717,1.80938774784468,3.22305328808468,2.46211349617592,1.7488850197791,0,0,0,0.370389054739423,0.376736914009382,0,0,0,0.279902904647316,0,0,0.790839983952838,0,0.216010681643603,0.209088296014469,0.436725127492355,0.134864346384821,0.909188012978695,0,0.259229946583586,0,0,0.897099276263873,0.165458490457098,0.777804753376191,0.904118764344118,0.675824501963113,0.704143431874524,0.5208175393758,0.314578033277133,0.483168241652012,0.576060012515731,0.632022241256357,0.202725215290164,0.924398614483445,0.25984164595559,0.358053391334963,0,0,0.590758108698309,0.201932899896295,0.15241361331,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.512200817262403,0,0,0,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0,0.581385666529314,0.376437521661322,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.464810523557898,0.192906610981141,0,0.233931608445408,0.644613162144895,0.382576664137687,1.32354851471709,0.231867835620421 | |||
|short_description=p2@Tlcd2 | |||
}} |
Revision as of 23:28, 3 August 2015
Short description: | p2@Tlcd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tlcd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 82bp_to_ENSMUST00000043598, ENSMUST00000108435, NM_027249, uc007kdw.1, uc011xzl.1_5end |
EntrezGene: | 380712 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.49e-09 | 5 |
epithelial cell | 8.97e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
liver | 2.86e-11 | 22 |
epithelial sac | 2.86e-11 | 22 |
digestive gland | 2.86e-11 | 22 |
epithelium of foregut-midgut junction | 2.86e-11 | 22 |
anatomical boundary | 2.86e-11 | 22 |
hepatobiliary system | 2.86e-11 | 22 |
foregut-midgut junction | 2.86e-11 | 22 |
hepatic diverticulum | 2.86e-11 | 22 |
liver primordium | 2.86e-11 | 22 |
septum transversum | 2.86e-11 | 22 |
liver bud | 2.86e-11 | 22 |
digestive tract diverticulum | 1.25e-10 | 23 |
sac | 1.25e-10 | 23 |
exocrine gland | 1.66e-09 | 25 |
exocrine system | 1.66e-09 | 25 |
epithelial tube | 1.77e-08 | 47 |
mucosa | 4.22e-07 | 15 |
intestine | 7.73e-07 | 31 |