Personal tools

FFCP PHASE1:Mm9::chr14:13448641..13448660,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1907|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:13448641..13448660,-|id=chr14:13448641..13448660,-|ontology_enrichment_celltype=CL:0000117!4.65e-17!23;CL:0000337!4.65e-17!23;CL:0002319!5.46e-13!43;CL:0000221!1.28e-12!44;CL:0000133!1.28e-12!44;CL:0000540!3.94e-11!33;CL:0000047!3.94e-11!33;CL:0000031!3.94e-11!33;CL:0000404!3.94e-11!33;CL:0000055!1.02e-10!50;CL:0002612!5.39e-10!3;CL:0000393!4.86e-09!39;CL:0000211!4.86e-09!39;CL:0002321!9.47e-07!70;CL:0000220!9.47e-07!70|ontology_enrichment_celltype_v019_2=CL:0002610,2.66e-39,3;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.54e-17!73;UBERON:0005743!3.54e-17!73;UBERON:0000073!1.37e-16!75;UBERON:0001016!1.37e-16!75;UBERON:0001049!7.84e-13!52;UBERON:0005068!7.84e-13!52;UBERON:0006241!7.84e-13!52;UBERON:0007135!7.84e-13!52;UBERON:0002020!2.89e-12!34;UBERON:0004121!6.50e-11!102;UBERON:0000924!6.50e-11!102;UBERON:0006601!6.50e-11!102;UBERON:0002616!1.50e-10!49;UBERON:0000955!2.82e-10!50;UBERON:0006238!2.82e-10!50;UBERON:0002257!5.39e-10!3;UBERON:0002346!1.95e-08!71;UBERON:0003075!1.95e-08!71;UBERON:0007284!1.95e-08!71;UBERON:0003076!2.08e-08!12;UBERON:0003057!2.08e-08!12;UBERON:0002791!2.08e-08!29;UBERON:0003528!2.08e-08!29;UBERON:0001893!2.08e-08!29;UBERON:0002240!2.62e-08!6;UBERON:0005174!2.62e-08!6;UBERON:0001137!2.62e-08!6;UBERON:0000033!1.63e-07!63;UBERON:0002780!4.80e-07!39;UBERON:0001890!4.80e-07!39;UBERON:0006240!4.80e-07!39;UBERON:0003080!8.10e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.66e-39,3;UBERON:0002275,2.66e-39,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.135005938331691,0,0,0,0,0.191690942036473,0,0,1.27687338085188,2.30409799884365,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0,0.883885756421003,0.711858403995515,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.515559547031063,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:13448641..13448660,-}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=1907
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr14:13448641..13448660,-
|description=CAGE_peak_at_chr14:13448641..13448660,-
|id=chr14:13448641..13448660,-
|ontology_enrichment_celltype=CL:0000117!4.65e-17!23;CL:0000337!4.65e-17!23;CL:0002319!5.46e-13!43;CL:0000221!1.28e-12!44;CL:0000133!1.28e-12!44;CL:0000540!3.94e-11!33;CL:0000047!3.94e-11!33;CL:0000031!3.94e-11!33;CL:0000404!3.94e-11!33;CL:0000055!1.02e-10!50;CL:0002612!5.39e-10!3;CL:0000393!4.86e-09!39;CL:0000211!4.86e-09!39;CL:0002321!9.47e-07!70;CL:0000220!9.47e-07!70
|ontology_enrichment_celltype_v019_2=CL:0002610,2.66e-39,3;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.54e-17!73;UBERON:0005743!3.54e-17!73;UBERON:0000073!1.37e-16!75;UBERON:0001016!1.37e-16!75;UBERON:0001049!7.84e-13!52;UBERON:0005068!7.84e-13!52;UBERON:0006241!7.84e-13!52;UBERON:0007135!7.84e-13!52;UBERON:0002020!2.89e-12!34;UBERON:0004121!6.50e-11!102;UBERON:0000924!6.50e-11!102;UBERON:0006601!6.50e-11!102;UBERON:0002616!1.50e-10!49;UBERON:0000955!2.82e-10!50;UBERON:0006238!2.82e-10!50;UBERON:0002257!5.39e-10!3;UBERON:0002346!1.95e-08!71;UBERON:0003075!1.95e-08!71;UBERON:0007284!1.95e-08!71;UBERON:0003076!2.08e-08!12;UBERON:0003057!2.08e-08!12;UBERON:0002791!2.08e-08!29;UBERON:0003528!2.08e-08!29;UBERON:0001893!2.08e-08!29;UBERON:0002240!2.62e-08!6;UBERON:0005174!2.62e-08!6;UBERON:0001137!2.62e-08!6;UBERON:0000033!1.63e-07!63;UBERON:0002780!4.80e-07!39;UBERON:0001890!4.80e-07!39;UBERON:0006240!4.80e-07!39;UBERON:0003080!8.10e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.66e-39,3;UBERON:0002275,2.66e-39,3
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.135005938331691,0,0,0,0,0.191690942036473,0,0,1.27687338085188,2.30409799884365,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0,0.883885756421003,0.711858403995515,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.515559547031063,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr14:13448641..13448660,-
}}

Latest revision as of 01:29, 4 August 2015

Short description:p@chr14:13448641..13448660, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr14:13448641..13448660, -
Coexpression cluster:MCL_coexpression_mm9:1907
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data