FFCP PHASE1:Mm9::chr2:13500030..13500091,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=501|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:13500030..13500091,+|id=chr2:13500030..13500091,+|ontology_enrichment_celltype=CL:0000055!1.80e-08!50;CL:0000333!8.58e-08!10;CL:0000095!8.58e-08!10;CL:0000243!8.58e-08!10;CL:0000123!8.58e-08!10;CL:0000125!8.58e-08!10;CL:0000030!8.58e-08!10;CL:0000339!8.58e-08!10;CL:0000221!6.07e-07!44;CL:0000133!6.07e-07!44;CL:0002319!8.12e-07!43|ontology_enrichment_celltype_v019_2=CL:0000333,8.53e-12,10;CL:0000095,8.53e-12,10;CL:0000243,8.53e-12,10;CL:0000123,8.53e-12,10;CL:0000125,8.53e-12,10;CL:0000030,8.53e-12,10;CL:0000339,8.53e-12,10;CL:0002453,8.95e-10,8;CL:0002319,7.19e-09,43;CL:0000221,1.71e-08,44;CL:0000133,1.71e-08,44;CL:0000107,2.75e-08,9;CL:0000128,7.31e-08,6;CL:0000126,7.31e-08,6;CL:0000127,7.31e-08,6;CL:0002321,9.70e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!7.24e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.78e-10,11;UBERON:0002410,2.75e-08,9|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.645616617207881,0,0,0,0,0.684802919724823,0.699363219351979,0.333109761815663,0,0,0,0.137114433605739,0,0.255129870453209,0.794327609607082,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,2.3440060335714,0.523523743973798,1.76469446409304,1.36609096991689,1.45653105909346,1.76255545165808,1.31790010585369,0.917733760808408,3.12956537739216,5.66865406589161,12.0827400503959,19.0541301092798,8.53917171914711,11.5002051491977,0.335565212115473,0.725362142011344,1.34437519656986,6.94600477297057,5.73066879877513,5.67239301505187,0.606949382578793,0.528990979272033,0.633831403506179,5.08266798103698,4.4464739805557,1.3498495759221,3.9554654502679,0.7104801149461,2.99600110518405,7.30014780110954,0.829516898467821,1.89008313664367,1.47227472945967,0.571301968807607,1.54607978666129,0.367472397644862,0.575072826109418,0.919218786610021,0,0.127687338085188,0,1.05509030184155,1.00636407962651,0,0,0,0.15279824777681,0.883885756421003,0.427115042397309,1.1183966749518,6.58817881998701,5.51672388779534,0.289864488701678,0,0,0,0,0,0.140444420131752,10.9075406449957,13.5088722393492,14.4869225549239,0.845060518660083,6.41632387071589,2.54805239706646,7.11066703153331,0,0,0,0,0.258937883647172,0,0.693941307064543,0.913396434936424,0.691846491768175,0.301445281105245,0.823120949949934,0.125666591329675,0.741584903203122,0.289198713839823,0.884610551949874,0.647067399789637,1.32504911076236,1.45462575940567,0,0,0.41889341362691,0,1.55759661857696,0.599902730993408,2.28726408731516,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,1.83310854930569,0.373220911830279,0,0.420883711772948,0.520481771850815,0.919608417733892,0.720248519221397,1.80845781402858,0.748401490664606,0.512454881139399,0.562210347358373,0.258703370739016,0.215567992932842,0.567318240503458,0.879755620819744,0.43839146485515,0.834141747676794,1.74126083261083,1.64625709126355,1.39323986772945,0.702213187313235,0.772043721344145,2.84163499395593,0.621377317606506,0.703578179943289,1.80062061461015,0.710234206755631,1.96764231747404,1.23413690309903,1.86027155800326,0.268273401399619,1.28441876603886,1.31647879930784,1.31333971263276,0.729619285912702,0.438599962275997,0.658650345873152,0.805238512562231,0.210289948564127,0.720332286654991,0,0.264450566663544,0.213288250535234,0.232236671860439,0.515469845288373,0.403367049246685,0,0.760902504450237,0,0.494096864172033,0.502670417600539,0,0.19496408711912,0.898819408654221,0,0,0.379335801906163,0.913988100877831,0,1.01825663922657,0.387904974335251,0.49095073923223,0.569128834118316,0,0.156998727841375,0.246794327843601,0.296452627087149,0.166845105716094,0,0.449724224769707,0,0.241177159752417,0,0.287696137450811,0.486405680325106,0,1.43768206527355,0,0,0,0,0,0.923765950833023,0.568474235311454,0.488894929326078,0.678980343100753,0.469380496577004,1.00503754465089,0.714130922658041,2.14647012643579,1.57635144106191,1.55025282754142,1.43509291791738,1.47476983244164,0.690739927463582,2.02508682014116,4.52373851817817,8.70249094109935,0,0.275936746304732,0,0.234423373184406,3.27869890753351,0.504941854408746,1.89304931649754,4.29482618726302,1.72338718186239,3.58453196928828,3.34198011123591,2.83076530788832,1.21443210502468,3.21481443702443,1.58115111178609,0.321321316421807,0.283880170416537,0.35613120733451,1.62886959353576,0.164970122972535,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,1.42598951353889,0.316036757935816,0,0,0,0.900305470156551,0.905510786479282,0.643011105094777,0.354680467284547,1.07021290561242,0.329098041204242,0.913394847343798,0.469343416127421,0.21183207086382,0,0.98931751764888,1.45317984026315,0.542816324353403,0.835606408021955,0.164140899745061,0,0.18542530201051,0.683483523191411,0.619160603889667,0.555583582109135,0.941842285023455,0.27338845544205,0,0.679913719975421,1.11961161858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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=501 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:13500030..13500091,+ | |||
|description=CAGE_peak_at_chr2:13500030..13500091,+ | |||
|id=chr2:13500030..13500091,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.80e-08!50;CL:0000333!8.58e-08!10;CL:0000095!8.58e-08!10;CL:0000243!8.58e-08!10;CL:0000123!8.58e-08!10;CL:0000125!8.58e-08!10;CL:0000030!8.58e-08!10;CL:0000339!8.58e-08!10;CL:0000221!6.07e-07!44;CL:0000133!6.07e-07!44;CL:0002319!8.12e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,8.53e-12,10;CL:0000095,8.53e-12,10;CL:0000243,8.53e-12,10;CL:0000123,8.53e-12,10;CL:0000125,8.53e-12,10;CL:0000030,8.53e-12,10;CL:0000339,8.53e-12,10;CL:0002453,8.95e-10,8;CL:0002319,7.19e-09,43;CL:0000221,1.71e-08,44;CL:0000133,1.71e-08,44;CL:0000107,2.75e-08,9;CL:0000128,7.31e-08,6;CL:0000126,7.31e-08,6;CL:0000127,7.31e-08,6;CL:0002321,9.70e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!7.24e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.78e-10,11;UBERON:0002410,2.75e-08,9 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.645616617207881,0,0,0,0,0.684802919724823,0.699363219351979,0.333109761815663,0,0,0,0.137114433605739,0,0.255129870453209,0.794327609607082,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,2.3440060335714,0.523523743973798,1.76469446409304,1.36609096991689,1.45653105909346,1.76255545165808,1.31790010585369,0.917733760808408,3.12956537739216,5.66865406589161,12.0827400503959,19.0541301092798,8.53917171914711,11.5002051491977,0.335565212115473,0.725362142011344,1.34437519656986,6.94600477297057,5.73066879877513,5.67239301505187,0.606949382578793,0.528990979272033,0.633831403506179,5.08266798103698,4.4464739805557,1.3498495759221,3.9554654502679,0.7104801149461,2.99600110518405,7.30014780110954,0.829516898467821,1.89008313664367,1.47227472945967,0.571301968807607,1.54607978666129,0.367472397644862,0.575072826109418,0.919218786610021,0,0.127687338085188,0,1.05509030184155,1.00636407962651,0,0,0,0.15279824777681,0.883885756421003,0.427115042397309,1.1183966749518,6.58817881998701,5.51672388779534,0.289864488701678,0,0,0,0,0,0.140444420131752,10.9075406449957,13.5088722393492,14.4869225549239,0.845060518660083,6.41632387071589,2.54805239706646,7.11066703153331,0,0,0,0,0.258937883647172,0,0.693941307064543,0.913396434936424,0.691846491768175,0.301445281105245,0.823120949949934,0.125666591329675,0.741584903203122,0.289198713839823,0.884610551949874,0.647067399789637,1.32504911076236,1.45462575940567,0,0,0.41889341362691,0,1.55759661857696,0.599902730993408,2.28726408731516,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,1.83310854930569,0.373220911830279,0,0.420883711772948,0.520481771850815,0.919608417733892,0.720248519221397,1.80845781402858,0.748401490664606,0.512454881139399,0.562210347358373,0.258703370739016,0.215567992932842,0.567318240503458,0.879755620819744,0.43839146485515,0.834141747676794,1.74126083261083,1.64625709126355,1.39323986772945,0.702213187313235,0.772043721344145,2.84163499395593,0.621377317606506,0.703578179943289,1.80062061461015,0.710234206755631,1.96764231747404,1.23413690309903,1.86027155800326,0.268273401399619,1.28441876603886,1.31647879930784,1.31333971263276,0.729619285912702,0.438599962275997,0.658650345873152,0.805238512562231,0.210289948564127,0.720332286654991,0,0.264450566663544,0.213288250535234,0.232236671860439,0.515469845288373,0.403367049246685,0,0.760902504450237,0,0.494096864172033,0.502670417600539,0,0.19496408711912,0.898819408654221,0,0,0.379335801906163,0.913988100877831,0,1.01825663922657,0.387904974335251,0.49095073923223,0.569128834118316,0,0.156998727841375,0.246794327843601,0.296452627087149,0.166845105716094,0,0.449724224769707,0,0.241177159752417,0,0.287696137450811,0.486405680325106,0,1.43768206527355,0,0,0,0,0,0.923765950833023,0.568474235311454,0.488894929326078,0.678980343100753,0.469380496577004,1.00503754465089,0.714130922658041,2.14647012643579,1.57635144106191,1.55025282754142,1.43509291791738,1.47476983244164,0.690739927463582,2.02508682014116,4.52373851817817,8.70249094109935,0,0.275936746304732,0,0.234423373184406,3.27869890753351,0.504941854408746,1.89304931649754,4.29482618726302,1.72338718186239,3.58453196928828,3.34198011123591,2.83076530788832,1.21443210502468,3.21481443702443,1.58115111178609,0.321321316421807,0.283880170416537,0.35613120733451,1.62886959353576,0.164970122972535,0,0.728341908464944,0.302323556964751,0,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,1.42598951353889,0.316036757935816,0,0,0,0.900305470156551,0.905510786479282,0.643011105094777,0.354680467284547,1.07021290561242,0.329098041204242,0.913394847343798,0.469343416127421,0.21183207086382,0,0.98931751764888,1.45317984026315,0.542816324353403,0.835606408021955,0.164140899745061,0,0.18542530201051,0.683483523191411,0.619160603889667,0.555583582109135,0.941842285023455,0.27338845544205,0,0.679913719975421,1.11961161858926,0.552799895217695,0,0,0.203319467126849,0.540026704109006,0.627264888043406,0.436725127492355,0.404593039154462,0.578574190077352,0,0.518459893167171,0.621339313086926,0,1.04661582230785,0.66183396182839,0.972255941720238,1.42075805825504,1.01373675294467,1.64300134104056,0.781226309063701,0.419437377702843,0,0,0,0.405450430580328,0.513554785824136,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.443068581523732,0.504832249740738,0.15241361331,0.100826185136841,0.38983152295901,0.384847366561318,0.233753804363138,0.680191150845634,0,0.807424709485281,0.335769232728157,0.386379188064381,0.563047426353546,0.36630324853453,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,1.3492355185943,0,0.512200817262403,1.45864030240976,0.628839487883947,1.47074806760011,0.666740183404846,1.03017528619447,0.64183841918363,0.252697211763798,1.01391719956096,0.754505365544305,0.561849044819294,0.768301828858431,0.631790158511746,0.476293691283074,1.0429589335037,0.77163688185482,1.23625770240992,1.32479028120958,0.685738504770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| |||
|short_description=p@chr2:13500030..13500091,+ | |||
}} |
Latest revision as of 03:18, 4 August 2015
Short description: | p@chr2:13500030..13500091, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:13500030..13500091, + |
Coexpression cluster: | MCL_coexpression_mm9:501 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 8.53e-12 | 10 |
neuron associated cell | 8.53e-12 | 10 |
glial cell (sensu Vertebrata) | 8.53e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 8.53e-12 | 10 |
glial cell | 8.53e-12 | 10 |
glioblast | 8.53e-12 | 10 |
glioblast (sensu Vertebrata) | 8.53e-12 | 10 |
oligodendrocyte precursor cell | 8.95e-10 | 8 |
neural cell | 7.19e-09 | 43 |
ectodermal cell | 1.71e-08 | 44 |
neurectodermal cell | 1.71e-08 | 44 |
autonomic neuron | 2.75e-08 | 9 |
oligodendrocyte | 7.31e-08 | 6 |
macroglial cell | 7.31e-08 | 6 |
astrocyte | 7.31e-08 | 6 |
embryonic cell | 9.70e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.78e-10 | 11 |
autonomic nervous system | 2.75e-08 | 9 |