FFCP PHASE1:Mm9::chr16:96422142..96422163,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=50795|HGNC=|MCL_coexpression_id=691|UniProt=Q9WUZ7,Q8R558|association_with_transcript=65bp_to_ENSMUST00000048770,NM_015825,uc008acu.1_5end|description=CAGE_peak_3_at_Sh3bgr_5end|id=chr16:96422142..96422163,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!8.83e-10!18;UBERON:0000948!8.83e-10!18;UBERON:0005498!8.83e-10!18;UBERON:0004140!8.83e-10!18;UBERON:0009881!8.83e-10!18;UBERON:0004141!8.83e-10!18;UBERON:0003084!8.83e-10!18;UBERON:0007005!8.83e-10!18;UBERON:0004139!8.83e-10!18;UBERON:0004291!8.83e-10!18;UBERON:0004535!1.48e-08!23;UBERON:0001009!1.48e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.90e-14,18;UBERON:0000948,5.90e-14,18;UBERON:0005498,5.90e-14,18;UBERON:0004140,5.90e-14,18;UBERON:0009881,5.90e-14,18;UBERON:0004141,5.90e-14,18;UBERON:0003084,5.90e-14,18;UBERON:0007005,5.90e-14,18;UBERON:0004139,5.90e-14,18;UBERON:0004291,5.90e-14,18;UBERON:0004535,7.47e-11,23;UBERON:0001009,7.47e-11,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,1.30815093828268,1.5378032791413,2.52758868796568,0.55994568650145,0,0,0,0,0,0,2.06268836910977,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0,0,1.3959149950069,0,0.45839474333043,0,0.569486723196412,0,0,0,0.579728977403356,0,0.679971333707751,0,0,0,6.31999890592883,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0.520455980298408,0.304465478312141,0.461230994512117,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,3.03658649531814,0,6.63244084784378,7.28777010919299,11.1521308221101,1.86391761218122,0.878342391034642,0.209446706813455,1.27728527604296,0,0,0,0.149790639404823,0,0.125654352112864,0.347648640384553,0,0,0.324482526135515,0,1.61729061793121,0.505445516867349,1.26265113531884,0,0,0.720248519221397,0.90422890701429,0.408218994907967,0.12811372028485,0.281105173679186,0,0,0.189106080167819,0.703804496655795,0.876782929710299,0,2.089512999133,1.23469281844766,0.199034266818493,0,0,0,38.3182679190678,19.7001890384121,22.5077576826269,16.3353867553795,15.5443743080449,16.3523139660621,13.4869687955237,14.4867636755794,12.37712629092,13.000228143165,9.68588038066662,7.37726166867287,10.2339991197733,7.46470391989572,8.72341721942416,0.420579897128254,0,0.330418782983798,0.528901133327089,0.639864751605702,2.55460339046482,2.44848176511977,2.01683524623343,1.77902435075896,2.47293313946327,2.37264530772256,1.31759163779209,2.01068167040216,1.98956472041151,1.36474860983384,1.79763881730844,1.72910439899755,1.39398891278057,0.758671603812327,0.456994050438915,0,1.4255592949172,0,0.140271639780637,0.505892296994058,0,0.156998727841375,0.246794327843601,0,0.83422552858047,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0.372140947668503,0.624075346229121,0,0.717589654087649,0,0.184753190166605,1.51593129416388,0.488894929326078,0.509235257325564,0,0.837531287209079,0.238043640886014,0.585400943573396,0,0.221464689648775,0.637819074629948,0.327726629431476,0.345369963731791,0.144649058581512,0,0,1.47529281905711,0.551873492609465,1.28440471990234,1.99259867206745,0,27.5193310652767,0.631016438832513,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,1.41940085208269,0.534196811001766,0.162886959353576,2.47455184458803,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0.948110273807448,0,0,1.02131881726136,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.42366414172764,1.54369878638473,4.122156323537,1.29171541356724,0.844380948994182,0.477489376012546,0.328281799490123,1.1659233465194,2.22510362412612,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,3.81868247206045,0.632671987162271,3.45643094115643,4.21220829205025,2.92723614420256,3.05707589244649,3.2367443132357,3.14083131756277,3.66458318777641,1.42576470620972,0,0,0,0,0.388902376688095,0.129159823477731,0,0,0.651021924219751,0.943734099831398,0,2.59227005632079,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,6.80191150845634,0.221985953374065,0,0,14.8755987404787,3.37828455812128,2.38097111547445,0.428736758158132,3.00943262421218,0,0,0,0,0,0,0,0,0,0,1.24544817101012,0,0.853668028770671,1.45864030240976,1.04806581313991,1.65459157605013,2.66696073361938,2.06035057238894,3.20919209591815,1.76888048234658,3.29523089857312,2.64076877940507,4.12022632867483,3.9695594491019,3.0440798546475,3.81034953026459,3.94006708212509,2.89363830695558,4.12085900803307,3.82717192349433,3.08582327146874,2.8396128985494,3.09967046931517,3.48831399917588,3.3879376949519,2.96151127620868,2.56099162021882,1.8414879800649,4.20992752922171,3.36685362994643,4.38949567059444,4.0386837773981,2.45538625901814,2.78886314134739,1.15743966588685,1.49886346762768,2.10538447600868,2.57845264857958,3.82576664137687,3.75005412503176,9.50658126043728|short_description=p3@Sh3bgr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50795 | |||
|HGNC= | |||
|MCL_coexpression_id=691 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WUZ7,uniprot:Q8R558 | |||
|association_with_transcript=65bp_to_ENSMUST00000048770,NM_015825,uc008acu.1_5end | |||
|cluster_id=chr16:96422142..96422163,+ | |||
|description=CAGE_peak_3_at_Sh3bgr_5end | |||
|id=chr16:96422142..96422163,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.83e-10!18;UBERON:0000948!8.83e-10!18;UBERON:0005498!8.83e-10!18;UBERON:0004140!8.83e-10!18;UBERON:0009881!8.83e-10!18;UBERON:0004141!8.83e-10!18;UBERON:0003084!8.83e-10!18;UBERON:0007005!8.83e-10!18;UBERON:0004139!8.83e-10!18;UBERON:0004291!8.83e-10!18;UBERON:0004535!1.48e-08!23;UBERON:0001009!1.48e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.90e-14,18;UBERON:0000948,5.90e-14,18;UBERON:0005498,5.90e-14,18;UBERON:0004140,5.90e-14,18;UBERON:0009881,5.90e-14,18;UBERON:0004141,5.90e-14,18;UBERON:0003084,5.90e-14,18;UBERON:0007005,5.90e-14,18;UBERON:0004139,5.90e-14,18;UBERON:0004291,5.90e-14,18;UBERON:0004535,7.47e-11,23;UBERON:0001009,7.47e-11,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,1.30815093828268,1.5378032791413,2.52758868796568,0.55994568650145,0,0,0,0,0,0,2.06268836910977,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0,0,1.3959149950069,0,0.45839474333043,0,0.569486723196412,0,0,0,0.579728977403356,0,0.679971333707751,0,0,0,6.31999890592883,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0.520455980298408,0.304465478312141,0.461230994512117,0.452167921657868,0.117588707135705,0.251333182659351,0.247194967734374,3.03658649531814,0,6.63244084784378,7.28777010919299,11.1521308221101,1.86391761218122,0.878342391034642,0.209446706813455,1.27728527604296,0,0,0,0.149790639404823,0,0.125654352112864,0.347648640384553,0,0,0.324482526135515,0,1.61729061793121,0.505445516867349,1.26265113531884,0,0,0.720248519221397,0.90422890701429,0.408218994907967,0.12811372028485,0.281105173679186,0,0,0.189106080167819,0.703804496655795,0.876782929710299,0,2.089512999133,1.23469281844766,0.199034266818493,0,0,0,38.3182679190678,19.7001890384121,22.5077576826269,16.3353867553795,15.5443743080449,16.3523139660621,13.4869687955237,14.4867636755794,12.37712629092,13.000228143165,9.68588038066662,7.37726166867287,10.2339991197733,7.46470391989572,8.72341721942416,0.420579897128254,0,0.330418782983798,0.528901133327089,0.639864751605702,2.55460339046482,2.44848176511977,2.01683524623343,1.77902435075896,2.47293313946327,2.37264530772256,1.31759163779209,2.01068167040216,1.98956472041151,1.36474860983384,1.79763881730844,1.72910439899755,1.39398891278057,0.758671603812327,0.456994050438915,0,1.4255592949172,0,0.140271639780637,0.505892296994058,0,0.156998727841375,0.246794327843601,0,0.83422552858047,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0.372140947668503,0.624075346229121,0,0.717589654087649,0,0.184753190166605,1.51593129416388,0.488894929326078,0.509235257325564,0,0.837531287209079,0.238043640886014,0.585400943573396,0,0.221464689648775,0.637819074629948,0.327726629431476,0.345369963731791,0.144649058581512,0,0,1.47529281905711,0.551873492609465,1.28440471990234,1.99259867206745,0,27.5193310652767,0.631016438832513,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,1.41940085208269,0.534196811001766,0.162886959353576,2.47455184458803,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0,0,0,0.948110273807448,0,0,1.02131881726136,0,0.129358683782755,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.42366414172764,1.54369878638473,4.122156323537,1.29171541356724,0.844380948994182,0.477489376012546,0.328281799490123,1.1659233465194,2.22510362412612,0.341741761595705,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,3.81868247206045,0.632671987162271,3.45643094115643,4.21220829205025,2.92723614420256,3.05707589244649,3.2367443132357,3.14083131756277,3.66458318777641,1.42576470620972,0,0,0,0,0.388902376688095,0.129159823477731,0,0,0.651021924219751,0.943734099831398,0,2.59227005632079,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,6.80191150845634,0.221985953374065,0,0,14.8755987404787,3.37828455812128,2.38097111547445,0.428736758158132,3.00943262421218,0,0,0,0,0,0,0,0,0,0,1.24544817101012,0,0.853668028770671,1.45864030240976,1.04806581313991,1.65459157605013,2.66696073361938,2.06035057238894,3.20919209591815,1.76888048234658,3.29523089857312,2.64076877940507,4.12022632867483,3.9695594491019,3.0440798546475,3.81034953026459,3.94006708212509,2.89363830695558,4.12085900803307,3.82717192349433,3.08582327146874,2.8396128985494,3.09967046931517,3.48831399917588,3.3879376949519,2.96151127620868,2.56099162021882,1.8414879800649,4.20992752922171,3.36685362994643,4.38949567059444,4.0386837773981,2.45538625901814,2.78886314134739,1.15743966588685,1.49886346762768,2.10538447600868,2.57845264857958,3.82576664137687,3.75005412503176,9.50658126043728 | |||
|short_description=p3@Sh3bgr | |||
}} |
Revision as of 06:30, 4 August 2015
Short description: | p3@Sh3bgr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sh3bgr_5end |
Coexpression cluster: | MCL_coexpression_mm9:691 |
Association with transcript: | 65bp_to_ENSMUST00000048770, NM_015825, uc008acu.1_5end |
EntrezGene: | 50795 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.90e-14 | 18 |
heart | 5.90e-14 | 18 |
primitive heart tube | 5.90e-14 | 18 |
primary heart field | 5.90e-14 | 18 |
anterior lateral plate mesoderm | 5.90e-14 | 18 |
heart tube | 5.90e-14 | 18 |
heart primordium | 5.90e-14 | 18 |
cardiac mesoderm | 5.90e-14 | 18 |
cardiogenic plate | 5.90e-14 | 18 |
heart rudiment | 5.90e-14 | 18 |
cardiovascular system | 7.47e-11 | 23 |
circulatory system | 7.47e-11 | 23 |