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FFCP PHASE1:Mm9::chr4:107743932..107744013,-: Difference between revisions

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{{FFCP|EntrezGene=20280|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=0bp_to_ENSMUST00000122878_5end|description=CAGE_peak_1_at_Scp2_5end|id=chr4:107743932..107744013,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!3.57e-11!25;UBERON:0002330!3.57e-11!25;UBERON:0009854!1.38e-10!23;UBERON:0009856!1.38e-10!23;UBERON:0002107!2.11e-10!22;UBERON:0007499!2.11e-10!22;UBERON:0006925!2.11e-10!22;UBERON:0009497!2.11e-10!22;UBERON:0000015!2.11e-10!22;UBERON:0002423!2.11e-10!22;UBERON:0006235!2.11e-10!22;UBERON:0008835!2.11e-10!22;UBERON:0003894!2.11e-10!22;UBERON:0004161!2.11e-10!22;UBERON:0008836!2.11e-10!22;UBERON:0005256!9.51e-09!47;UBERON:0001007!5.80e-07!128;UBERON:0001555!5.80e-07!128;UBERON:0007026!5.80e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.57e-11,25;UBERON:0002330,3.57e-11,25;UBERON:0009854,1.38e-10,23;UBERON:0009856,1.38e-10,23;UBERON:0002107,2.11e-10,22;UBERON:0007499,2.11e-10,22;UBERON:0006925,2.11e-10,22;UBERON:0009497,2.11e-10,22;UBERON:0000015,2.11e-10,22;UBERON:0002423,2.11e-10,22;UBERON:0006235,2.11e-10,22;UBERON:0008835,2.11e-10,22;UBERON:0003894,2.11e-10,22;UBERON:0004161,2.11e-10,22;UBERON:0008836,2.11e-10,22;UBERON:0005256,3.74e-08,45;UBERON:0001007,3.80e-08,116;UBERON:0001555,3.80e-08,116;UBERON:0007026,3.80e-08,116;UBERON:0000160,6.98e-08,31;UBERON:0004119,8.53e-08,118;UBERON:0000925,8.53e-08,118;UBERON:0006595,8.53e-08,118;UBERON:0003104,1.01e-07,61;UBERON:0009142,1.01e-07,61;UBERON:0004921,1.54e-07,114|phase1_expression=153.582744373497,634.088315680719,542.359093352327,503.300447614565,361.145821291316,143.03313966893,151.147378465305,82.2515570322841,12.1078301050433,11.9372908424217,20.5461561870606,21.8575715647222,113.848485404252,124.66149384949,48.9671349869024,52.8460447887446,50.3684552252266,85.0170535640451,90.3584117461819,74.2681890646553,122.037121366785,106.53919063855,106.047114390408,335.504110597774,309.243710878545,624.190144993027,494.084009594459,421.030788668227,497.8613589757,364.1835375031,209.091871547952,18.4158895303293,10.4561013889377,0,85.211227826626,116.031782460228,96.776274868363,638.679268504521,602.40955062785,844.96732277371,772.936175272753,721.296032116119,953.056823000155,62.1930280799352,56.8724584141477,47.1715153055522,57.8969594817549,73.4744777002105,117.092735397473,121.324257022353,68.733333018053,51.7509231713898,75.8377379380968,108.07895915969,110.910953717013,58.39789198016,71.3468265447504,144.388185837684,46.9374189194267,33.3264316941381,32.9592329823213,43.710944636918,41.7968554172235,82.7907739898887,73.1761108299561,84.5471336785859,53.328819672276,48.0272881651943,43.9643956187945,35.6415677195663,38.4894679273029,84.8383423679297,98.7282378053713,49.7312644812713,44.7598349655164,49.6378144769411,67.1706874096271,82.6137077411165,86.7876912897776,39.0383411681374,45.3778712267952,53.1331637967895,112.231565598555,77.0984775743402,85.26142225946,55.6848026545232,76.7383359507165,59.8342221099215,59.2936093798831,71.5662674211259,116.815388946776,1214.05809042074,1412.98043144471,1247.254075875,1474.34269118876,1476.69661987282,553.491459739234,68.5129896763792,57.412707017234,49.4675404314476,290.841661838845,37.2146784501522,56.0571527354621,28.4426681261332,53.4732871297699,53.7122914807209,52.0690178365227,835.825999543519,97.3606442513366,179.021219712179,52.2190833566069,71.244921925041,78.870500061572,110.781140806178,94.8940866585138,220.54486778358,67.4842261914841,456.500169796161,104.384045130085,84.1187619726528,99.8203663440979,88.2472960706104,145.385573750135,97.4960054048452,95.2982516001221,391.104751524353,92.3774609940645,112.781713426761,111.821799824297,113.840885947665,97.9051290031861,53.0261365916288,99.2536868297899,98.4504510721773,99.3226852994697,100.427341838942,58.2521161223809,131.373760964258,331.319536306548,600.180172988224,55.0409473732237,77.9368134029473,66.2628637683685,85.4496317128504,76.4730250460925,88.9109218776858,87.9859193615854,218.08694153299,34.9220148551204,31.391609307858,36.9497360744293,47.5654739367837,61.4484420788571,57.4616074761575,62.7635516044228,39.6078190968801,126.398373716382,82.3513302767089,105.992985274556,52.6099462240175,63.7910883148582,65.1824662488874,59.659673367473,60.406619146453,67.2604612188969,64.8769705853638,60.6297887163139,83.8375158196277,102.685346346012,177.629196133581,206.157982675111,235.674379729636,216.476413676976,241.571553768669,97.1539562366268,59.3759613428471,761.284875994671,397.733652261971,42.870938357582,46.6795710439481,55.6707432911443,108.102369198112,154.997496559875,261.179784652544,390.537417651133,397.747975658486,343.826565638769,380.205818070639,300.634622337683,331.664361793408,424.495129953899,409.633599084233,38.1232480915694,56.5530137418158,61.9892546201942,74.536385991385,80.2963296873971,96.9978389083106,203.49517646586,368.139709061128,368.319015515865,407.95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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20280
|HGNC=
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|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000122878_5end
|cluster_id=chr4:107743932..107744013,-
|description=CAGE_peak_1_at_Scp2_5end
|id=chr4:107743932..107744013,-
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|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.57e-11,25;UBERON:0002330,3.57e-11,25;UBERON:0009854,1.38e-10,23;UBERON:0009856,1.38e-10,23;UBERON:0002107,2.11e-10,22;UBERON:0007499,2.11e-10,22;UBERON:0006925,2.11e-10,22;UBERON:0009497,2.11e-10,22;UBERON:0000015,2.11e-10,22;UBERON:0002423,2.11e-10,22;UBERON:0006235,2.11e-10,22;UBERON:0008835,2.11e-10,22;UBERON:0003894,2.11e-10,22;UBERON:0004161,2.11e-10,22;UBERON:0008836,2.11e-10,22;UBERON:0005256,3.74e-08,45;UBERON:0001007,3.80e-08,116;UBERON:0001555,3.80e-08,116;UBERON:0007026,3.80e-08,116;UBERON:0000160,6.98e-08,31;UBERON:0004119,8.53e-08,118;UBERON:0000925,8.53e-08,118;UBERON:0006595,8.53e-08,118;UBERON:0003104,1.01e-07,61;UBERON:0009142,1.01e-07,61;UBERON:0004921,1.54e-07,114
|phase1_expression=153.582744373497,634.088315680719,542.359093352327,503.300447614565,361.145821291316,143.03313966893,151.147378465305,82.2515570322841,12.1078301050433,11.9372908424217,20.5461561870606,21.8575715647222,113.848485404252,124.66149384949,48.9671349869024,52.8460447887446,50.3684552252266,85.0170535640451,90.3584117461819,74.2681890646553,122.037121366785,106.53919063855,106.047114390408,335.504110597774,309.243710878545,624.190144993027,494.084009594459,421.030788668227,497.8613589757,364.1835375031,209.091871547952,18.4158895303293,10.4561013889377,0,85.211227826626,116.031782460228,96.776274868363,638.679268504521,602.40955062785,844.96732277371,772.936175272753,721.296032116119,953.056823000155,62.1930280799352,56.8724584141477,47.1715153055522,57.8969594817549,73.4744777002105,117.092735397473,121.324257022353,68.733333018053,51.7509231713898,75.8377379380968,108.07895915969,110.910953717013,58.39789198016,71.3468265447504,144.388185837684,46.9374189194267,33.3264316941381,32.9592329823213,43.710944636918,41.7968554172235,82.7907739898887,73.1761108299561,84.5471336785859,53.328819672276,48.0272881651943,43.9643956187945,35.6415677195663,38.4894679273029,84.8383423679297,98.7282378053713,49.7312644812713,44.7598349655164,49.6378144769411,67.1706874096271,82.6137077411165,86.7876912897776,39.0383411681374,45.3778712267952,53.1331637967895,112.231565598555,77.0984775743402,85.26142225946,55.6848026545232,76.7383359507165,59.8342221099215,59.2936093798831,71.5662674211259,116.815388946776,1214.05809042074,1412.98043144471,1247.254075875,1474.34269118876,1476.69661987282,553.491459739234,68.5129896763792,57.412707017234,49.4675404314476,290.841661838845,37.2146784501522,56.0571527354621,28.4426681261332,53.4732871297699,53.7122914807209,52.0690178365227,835.825999543519,97.3606442513366,179.021219712179,52.2190833566069,71.244921925041,78.870500061572,110.781140806178,94.8940866585138,220.54486778358,67.4842261914841,456.500169796161,104.384045130085,84.1187619726528,99.8203663440979,88.2472960706104,145.385573750135,97.4960054048452,95.2982516001221,391.104751524353,92.3774609940645,112.781713426761,111.821799824297,113.840885947665,97.9051290031861,53.0261365916288,99.2536868297899,98.4504510721773,99.3226852994697,100.427341838942,58.2521161223809,131.373760964258,331.319536306548,600.180172988224,55.0409473732237,77.9368134029473,66.2628637683685,85.4496317128504,76.4730250460925,88.9109218776858,87.9859193615854,218.08694153299,34.9220148551204,31.391609307858,36.9497360744293,47.5654739367837,61.4484420788571,57.4616074761575,62.7635516044228,39.6078190968801,126.398373716382,82.3513302767089,105.992985274556,52.6099462240175,63.7910883148582,65.1824662488874,59.659673367473,60.406619146453,67.2604612188969,64.8769705853638,60.6297887163139,83.8375158196277,102.685346346012,177.629196133581,206.157982675111,235.674379729636,216.476413676976,241.571553768669,97.1539562366268,59.3759613428471,761.284875994671,397.733652261971,42.870938357582,46.6795710439481,55.6707432911443,108.102369198112,154.997496559875,261.179784652544,390.537417651133,397.747975658486,343.826565638769,380.205818070639,300.634622337683,331.664361793408,424.495129953899,409.633599084233,38.1232480915694,56.5530137418158,61.9892546201942,74.536385991385,80.2963296873971,96.9978389083106,203.49517646586,368.139709061128,368.319015515865,407.951023925473,1803.02487794404,66.0706618635732,92.972404688545,118.502333226818,149.710769584715,221.641809812471,310.134287469769,425.214891152298,567.959699392949,1086.71407339843,899.988972861239,1565.22482589373,1696.23679105075,1484.15348681723,1265.11056015652,1681.31567195133,212.096662311262,63.4796229431124,66.1637804354625,63.6544071656956,82.6109673975527,115.914330149737,170.2012032335,153.765314511945,161.260752420633,180.050792684454,146.538932396231,179.102602984302,223.281681552603,218.275429399501,105.553898757491,119.659250440116,172.609259829682,185.98136700939,136.789102669599,119.321496950863,85.0822366504946,199.19956156425,59.3155452502563,75.7451163935479,69.3663340699613,61.892918669711,60.6012393504112,61.7106837119655,66.3889550746827,66.3420797458678,69.1753611406416,107.963962317727,101.62910100912,51.4609594598368,53.1011487492658,76.0512266903389,71.6823747035799,44.1860757802066,57.4414758233027,88.832992565028,61.4227937192007,75.6290463942062,115.775875339363,80.7044879440062,94.1153078935664,99.551578749782,110.689539003749,104.166898680669,110.983311475735,63.3815050990212,63.1270376859842,69.6595363852675,73.241516494259,58.5049721734791,68.6169415910844,41.1027681304709,81.6657544061712,63.1259571174184,138.491833978516,134.052523641423,94.7796184704966,144.811332752502,137.516940291613,121.792547610835,383.880261841513,125.162078857094,76.7210254782359,57.5819361617391,61.4845830867443,71.2032767477732,71.9011637812592,72.9802372528807,96.5477482365098,101.044948577681,94.6669820560303,342.726751867426,42.2308551430816,60.3858817366741,77.8718507325187,79.4535524854981,109.181281873089,152.666440107617,257.961435318773,280.078857922912,240.695005402859,154.092149645558,24.2387963634202,43.8083479908858,49.4720886466722,45.1126756958191,39.2645863372303,53.3901356550859,47.4123244128846,70.3103678157331,45.5089554807585,26.8158374116867,52.9975211514472,90.379180499659,49.0595021002197,61.0103085559074,67.4289071254756,51.3806616565672,70.3331995925678,75.4827422985404,76.503175076431,94.3026642515699,76.7402543015848,77.6361625553672,72.1188317474168,79.1823456699912,81.346323918372,109.284044902532,23.0865391509027,25.1198798506532,36.5988463673691,209.803899118959,93.4658727746886,66.4840396090172,108.256031434928,141.443333337972,85.277528235177,96.6682996665072,91.6632821503035,76.1309597782536,104.817625524908,118.596841890183,85.7278575294393,93.6668102706379,95.6130482956672,81.8061292567875,57.601977909218,51.075183795332,56.000622687356,62.2353195694833,98.5181864351517,137.514944320611,109.123143350593,111.052895851764,130.293199094277,120.536570011331,115.84004004984,111.666794100557,124.917770964823,119.79106014951,126.243160764438,106.689786847408,108.815382062219,115.938441498687,120.741168935369,120.555915590071,125.833015625447,125.297919148492,124.940563532396,115.695747639334,120.083569409962,118.714294872022,113.598271153992,125.484252355851,136.618938528937,89.2216211935804,110.093296819234,111.704083013889,93.3046778426892,116.35756773066,107.641888927477,54.7085165684102,137.785717374346,153.632803644533,90.4793810685629,163.017058729322,203.57995967473
|short_description=p1@Scp2
}}

Revision as of 12:34, 4 August 2015

Short description:p1@Scp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scp2_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000122878_5end
EntrezGene:20280
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7153.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5634.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6542.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I3503.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I4361.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7143.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8151.15
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E982.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F121.86
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4113.85
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8124.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A148.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A352.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A550.37
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A285.02
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A490.36
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A674.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3122.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2106.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9106.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1335.50
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2309.24
GP2+ M cell, pool1.CNhs13228.11845-124H9624.19
GP2+ M cell, pool2.CNhs13231.11846-124I1494.08
GP2+ M cell, pool3.CNhs13240.11847-124I2421.03
Ileum epithelium, pool1.CNhs13199.10252-104B9497.86
Ileum epithelium, pool2.CNhs13232.10253-104C1364.18
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8209.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I318.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G610.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F585.21
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6116.03
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F796.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8638.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1602.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3844.97
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9772.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2721.30
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4953.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D862.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D956.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B347.17
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B757.90
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C273.47
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8117.09
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3121.32
Mouse Astrocytes, donor2.CNhs12078.11552-120C468.73
Mouse Astrocytes, donor3.CNhs12107.11633-122C451.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A275.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9108.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1110.91
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C158.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E171.35
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5144.39
Mouse Granule cells, donor1.CNhs12131.11713-123C346.94
Mouse Granule cells, donor2.CNhs12357.11731-123E333.33
Mouse Granule cells, donor3.CNhs12108.11636-122C732.96
Mouse Meningeal cells, donor1.CNhs12132.11716-123C643.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D141.80
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C782.79
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E773.18
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D284.55
Mouse Microglia, donor1.CNhs12629.11718-123C853.33
Mouse Microglia, donor2.CNhs12634.11736-123E848.03
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D543.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F535.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D938.49
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F184.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D598.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D249.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F244.76
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D649.64
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D367.17
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F382.61
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D786.79
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D439.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F445.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D853.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4112.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E577.10
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I685.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D655.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F676.74
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E159.83
Mouse Schwann, donor1.CNhs12507.11728-123D959.29
Mouse Schwann, donor2.CNhs12573.11746-123F971.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3116.82
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71214.06
Mouse hepatocyte, donor1.CNhs13078.11714-123C41412.98
Mouse hepatocyte, donor3.CNhs12615.11637-122C81247.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F41474.34
Mouse hepatocyte, donor8.CNhs13091.11824-124F61476.70
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7553.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I768.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E357.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I849.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6290.84
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H137.21
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I856.06
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G153.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G253.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G352.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6835.83
accessory axillary lymph node, adult.CNhs10475.1063-29H997.36
adrenal gland, adult.CNhs10508.49-24D7179.02
adrenal gland, embryo E14.CNhs11038.406-44C552.22
adrenal gland, embryo E16.CNhs11004.1254-43D671.24
adrenal gland, embryo E17.CNhs11043.1263-45I178.87
adrenal gland, embryo E18.CNhs11026.1262-18F5110.78
adrenal gland, neonate N00.CNhs11191.1311-23C194.89
adrenal gland, neonate N25.CNhs11223.1377-27I3220.54
amnion, adult pregnant day17.5.CNhs10488.583-22A867.48
aorta, adult.CNhs10498.46-23H1456.50
bone (os femoris), adult.CNhs10483.56-12G2104.38
bone (os femoris), neonate N02.CNhs11227.1985-43F584.12
bone (os femoris), neonate N16.CNhs11225.1525-43A699.82
bone (os femoris), neonate N20.CNhs11195.1350-25C388.25
cecum, adult.CNhs10467.37-13H4145.39
cerebellum, adult.CNhs10494.15-8B297.50
cerebellum, neonate N30.CNhs11135.1395-42I295.30
colon, adult.CNhs10468.36-18H7391.10
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C792.38
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1112.78
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4111.82
corpora quadrigemina, adult.CNhs10501.16-22A4113.84
corpus striatum, adult.CNhs10487.19-21D897.91
corpus striatum, neonate N00.CNhs11226.630-43F153.03
cortex, adult.CNhs10473.12-14D599.25
cortex, neonate N30.CNhs11107.1392-42F298.45
diencephalon, adult.CNhs10482.20-12F299.32
diencephalon, neonate N30.CNhs11201.1388-42B2100.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B158.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2131.37
epididymis, adult.CNhs10490.58-23B2331.32
eyeball, adult.CNhs10484.31-12G4600.18
eyeball, embryo E12.CNhs11016.345-16C655.04
eyeball, embryo E14.CNhs10521.399-16E277.94
eyeball, embryo E15.CNhs10593.426-16C966.26
eyeball, embryo E17.CNhs11023.1261-18D485.45
eyeball, neonate N00.CNhs11207.633-15C676.47
eyeball, neonate N01.CNhs11140.1532-43E788.91
eyeball, neonate N02.CNhs11205.1551-44G887.99
eyeball, neonate N16.CNhs11188.777-19A2218.09
forelimb, embryo E11.CNhs10596.335-25E234.92
forelimb, embryo E12.CNhs10600.359-14H231.39
forelimb, embryo E13.CNhs10589.384-1E236.95
forelimb, embryo E14.CNhs10577.413-26A847.57
forelimb, embryo E15.CNhs11007.437-20E761.45
forelimb, embryo E17.CNhs10598.1517-43C457.46
forelimb, embryo E18.CNhs11008.1520-43B562.76
gonad, embryo E13.CNhs11044.1564-45I639.61
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8126.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D282.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5105.99
heart, embryo E11.CNhs10586.331-24E952.61
heart, embryo E12.CNhs11015.353-12F563.79
heart, embryo E13.CNhs11013.376-3I965.18
heart, embryo E14.CNhs10597.403-26D459.66
heart, embryo E15.CNhs11017.431-16C860.41
heart, embryo E16.CNhs11021.457-17C667.26
heart, embryo E17.CNhs11025.479-18E564.88
heart, embryo E18.CNhs11030.1283-20G360.63
heart, neonate N00.CNhs11213.639-21E383.84
heart, neonate N03.CNhs11221.1349-25I2102.69
heart, neonate N10.CNhs11118.749-24G1177.63
heart, neonate N16.CNhs11209.782-15G1206.16
heart, neonate N20.CNhs11127.821-26I6235.67
heart, neonate N25.CNhs11196.1351-25D3216.48
heart, neonate N30.CNhs11202.1390-42D2241.57
hippocampus, adult.CNhs10478.13-16E897.15
hippocampus, neonate N00.CNhs11228.627-43G159.38
intestinal mucosa, adult.CNhs10506.860-29I3761.28
intestine, adult.CNhs10496.178-9A3397.73
intestine, embryo E12.CNhs11019.1251-16I542.87
intestine, embryo E13.CNhs11010.381-16D546.68
intestine, embryo E15.CNhs10602.976-16D855.67
intestine, embryo E16.CNhs10585.463-22H4108.10
intestine, embryo E17.CNhs10582.482-18D3155.00
intestine, embryo E18.CNhs10526.1289-20F7261.18
intestine, neonate N00.CNhs11126.644-26D1390.54
intestine, neonate N01.CNhs11192.1322-23E9397.75
intestine, neonate N06.CNhs11102.688-20B8343.83
intestine, neonate N07.CNhs11095.720-20F2380.21
intestine, neonate N10.CNhs11098.755-23A5300.63
intestine, neonate N20.CNhs11187.827-18D1331.66
intestine, neonate N25.CNhs11121.1352-25E3424.50
intestine, neonate N30.CNhs11131.1384-42G1409.63
kidney, embryo E14.CNhs10606.411-4I938.12
kidney, embryo E15.CNhs10997.434-16F856.55
kidney, embryo E16.CNhs10584.464-22A561.99
kidney, embryo E17.CNhs11028.483-18I274.54
kidney, embryo E18.CNhs11001.1288-20C780.30
kidney, neonate N00.CNhs11214.646-21G797.00
kidney, neonate N10.CNhs11206.758-6D5203.50
kidney, neonate N20.CNhs11113.832-19I1368.14
kidney, neonate N25.CNhs11122.1353-25F3368.32
kidney, neonate N30.CNhs11203.1385-42H1407.95
liver, adult pregnant day01.CNhs10466.508-5B21803.02
liver, embryo E12.CNhs10601.355-15F866.07
liver, embryo E13.CNhs10524.378-3H692.97
liver, embryo E14.CNhs10594.409-16E1118.50
liver, embryo E15.CNhs10520.433-16D7149.71
liver, embryo E16.CNhs10523.462-17F5221.64
liver, embryo E17.CNhs10510.481-18A3310.13
liver, embryo E18.CNhs10579.499-43G4425.21
liver, neonate N00.CNhs11117.641-24F4567.96
liver, neonate N03.CNhs11123.1345-25G21086.71
liver, neonate N06.CNhs11101.684-20A8899.99
liver, neonate N07.CNhs11103.716-20H21565.22
liver, neonate N10.CNhs11115.751-24B91696.24
liver, neonate N20.CNhs11220.823-25A31484.15
liver, neonate N25.CNhs11198.1368-26H11265.11
liver, neonate N30.CNhs11106.1382-42D11681.32
lung, adult.CNhs10474.28-22B1212.10
lung, embryo E12.CNhs10522.354-16G263.48
lung, embryo E14.CNhs10604.404-26F866.16
lung, embryo E15.CNhs11020.432-17C563.65
lung, embryo E16.CNhs10998.458-17B682.61
lung, embryo E17.CNhs10605.480-44A6115.91
lung, embryo E18.CNhs10583.1287-20I6170.20
lung, neonate N00.CNhs11224.640-42C6153.77
lung, neonate N06.CNhs11212.683-20E5161.26
lung, neonate N07.CNhs11111.715-19A3180.05
lung, neonate N10.CNhs11219.750-23E6146.54
lung, neonate N20.CNhs11109.822-18A4179.10
lung, neonate N25.CNhs11119.1359-25C7223.28
lung, neonate N30.CNhs11133.1394-42H2218.28
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1105.55
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1119.66
mammary gland, adult lactating day02.CNhs10480.595-22B6172.61
mammary gland, adult pregnant day19.CNhs10476.588-5H2185.98
medulla oblongata, adult.CNhs10477.17-12C2136.79
medulla oblongata, neonate N30.CNhs11200.1396-42A3119.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C785.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2199.20
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E159.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E275.75
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E369.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D761.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D860.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D961.71
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D466.39
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D566.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D669.18
olfactory brain, adult.CNhs10489.18-22I9107.96
ovary, adult.CNhs10507.91-2I7101.63
ovary, embryo E18.CNhs11040.505-44H751.46
ovary, neonate N00.CNhs11217.1299-22I453.10
oviduct, adult pregnant day01.CNhs10500.988-6G676.05
pancreas, adult.CNhs10486.34-16E471.68
pancreas, embryo E14.CNhs11012.405-44F444.19
pancreas, embryo E15.CNhs11042.1556-45F257.44
pancreas, embryo E16.CNhs11003.460-26E588.83
pancreas, embryo E17.CNhs10599.1558-45G361.42
pancreas, embryo E18.CNhs10580.1535-43I775.63
pancreas, neonate N00.CNhs11105.645-26G9115.78
pancreas, neonate N01.CNhs11138.1531-43D780.70
pancreas, neonate N02.CNhs11139.1539-43D894.12
pancreas, neonate N16.CNhs11136.787-43B699.55
pancreas, neonate N25.CNhs11094.1555-45E2110.69
pancreas, neonate N30.CNhs11182.1548-44H5104.17
pituitary gland, adult.CNhs10493.21-1G8110.98
pituitary gland, embryo E12.CNhs11018.346-16E663.38
pituitary gland, embryo E13.CNhs11009.370-44C763.13
pituitary gland, embryo E14.CNhs11037.398-44A569.66
pituitary gland, embryo E15.CNhs10592.427-16B973.24
pituitary gland, embryo E16.CNhs11036.449-43F658.50
pituitary gland, embryo E17.CNhs11039.1265-44F568.62
pituitary gland, neonate N00.CNhs11190.1308-22E941.10
placenta, adult pregnant day10.CNhs10472.539-13I781.67
placenta, adult pregnant day17.CNhs10464.577-18G363.13
prostate, adult.CNhs10470.859-1F8138.49
skin, adult.CNhs10492.30-1C3134.05
skin, neonate N00.CNhs11124.650-25G494.78
skin, neonate N03.CNhs11215.662-22H3144.81
skin, neonate N06.CNhs11097.693-20I5137.52
skin, neonate N10.CNhs11108.762-6C4121.79
small intestine, neonate N16.CNhs11114.790-21I1383.88
spinal cord, adult.CNhs10505.24-13C9125.16
spleen, adult.CNhs10465.25-2G276.72
spleen, embryo E16.CNhs11035.461-43C157.58
spleen, embryo E18.CNhs11011.1271-21F261.48
spleen, neonate N10.CNhs11116.752-24D171.20
spleen, neonate N20.CNhs11112.824-19H171.90
spleen, neonate N25.CNhs11099.1354-25G372.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C696.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9101.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D394.67
stomach, adult.CNhs10503.33-1H6342.73
stomach, embryo E12.CNhs10588.356-43E342.23
stomach, embryo E15.CNhs10603.1252-16G860.39
stomach, embryo E16.CNhs11022.459-17D477.87
stomach, embryo E17.CNhs11006.1035-18D579.45
stomach, embryo E18.CNhs10999.1286-20C6109.18
stomach, neonate N03.CNhs11193.1340-24B8152.67
stomach, neonate N07.CNhs11210.718-18A9257.96
stomach, neonate N25.CNhs11104.1355-25E4280.08
stomach, neonate N30.CNhs11134.1386-42I1240.70
submandibular gland, adult.CNhs10469.59-29C1154.09
testis, adult.CNhs10504.57-7G524.24
testis, embryo E13.CNhs11031.389-23F543.81
testis, embryo E15.CNhs11034.443-27C549.47
testis, embryo E16.CNhs11033.470-26G545.11
testis, embryo E17.CNhs11029.486-18I539.26
testis, embryo E18.CNhs11027.503-18G553.39
testis, neonate N00.CNhs11189.1300-22B747.41
testis, neonate N07.CNhs11222.726-26I470.31
testis, neonate N10.CNhs11204.763-44D945.51
testis, neonate N20.CNhs11110.839-18H326.82
testis, neonate N30.CNhs11130.1391-42E253.00
thymus, adult.CNhs10471.38-12B590.38
thymus, embryo E14.CNhs11041.402-44I449.06
thymus, embryo E15.CNhs11005.430-45I261.01
thymus, embryo E16.CNhs11002.456-26C567.43
thymus, embryo E17.CNhs10581.478-18C151.38
thymus, embryo E18.CNhs10595.1273-19G470.33
thymus, neonate N02.CNhs11181.1541-43F875.48
thymus, neonate N03.CNhs11137.2104-43C776.50
thymus, neonate N06.CNhs11197.681-26C494.30
thymus, neonate N07.CNhs11211.713-19D376.74
thymus, neonate N10.CNhs11194.748-24E477.64
thymus, neonate N20.CNhs11186.820-7A272.12
thymus, neonate N25.CNhs11125.1362-25G779.18
thymus, neonate N30.CNhs11132.1393-42G281.35
tongue, adult.CNhs10499.32-1B4109.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.12
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G536.60
urinary bladder, adult.CNhs10481.879-12E4209.80
uterus, adult pregnant day19.CNhs10497.590-15F593.47
uterus, adult.CNhs10509.92-27E566.48
vagina, adult.CNhs10502.89-27D5108.26
vesicular gland, adult.CNhs10491.51-27F8141.44
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A185.28
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A296.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A391.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D776.13
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4104.82
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5118.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A685.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A793.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A895.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A981.81
whole body, embryo E11.CNhs11014.324-5I857.60
whole body, embryo E12.CNhs10587.857-27C951.08
whole body, embryo E13.CNhs10512.372-23H256.00
whole body, embryo E14.5.CNhs10578.420-27D262.24
whole body, embryo E14.CNhs10519.395-14B198.52
whole body, embryo E16.CNhs10514.453-14F2137.51
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5109.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5111.05
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5130.29
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5120.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5115.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5111.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5124.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5119.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5126.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5106.69
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5108.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5115.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5120.74
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5120.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5125.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5125.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5124.94
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5115.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5120.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5118.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5113.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5125.48
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5136.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G589.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5110.09
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5111.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G593.30
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5116.36
whole body, embryo E17.5.CNhs10513.490-9F9107.64
whole body, embryo E17.CNhs10517.475-3I554.71
whole body, embryo E18.CNhs10516.493-3B3137.79
whole body, neonate N00.CNhs10525.657-19C2153.63
whole body, neonate N01.CNhs10576.659-23C690.48
whole body, neonate N06.CNhs10515.692-21D1163.02
whole body, neonate N10.CNhs10518.761-6B4203.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland3.57e-1125
exocrine system3.57e-1125
digestive tract diverticulum1.38e-1023
sac1.38e-1023
liver2.11e-1022
epithelial sac2.11e-1022
digestive gland2.11e-1022
epithelium of foregut-midgut junction2.11e-1022
anatomical boundary2.11e-1022
hepatobiliary system2.11e-1022
foregut-midgut junction2.11e-1022
hepatic diverticulum2.11e-1022
liver primordium2.11e-1022
septum transversum2.11e-1022
liver bud2.11e-1022
trunk mesenchyme3.74e-0845
digestive system3.80e-08116
digestive tract3.80e-08116
primitive gut3.80e-08116
intestine6.98e-0831
endoderm-derived structure8.53e-08118
endoderm8.53e-08118
presumptive endoderm8.53e-08118
mesenchyme1.01e-0761
entire embryonic mesenchyme1.01e-0761
subdivision of digestive tract1.54e-07114
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