FFCP PHASE1:Mm9::chr7:149620885..149620896,+: Difference between revisions
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{{FFCP|EntrezGene=55925|HGNC=|MCL_coexpression_id=1628|UniProt=Q9R0N6,A8Y5C6|association_with_transcript=3bp_to_ENSMUST00000118276,NM_018802,uc009kmw.1,uc009kmx.1,uc009kmy.1_5end|description=CAGE_peak_3_at_Syt8_5end|id=chr7:149620885..149620896,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,5.45e-08,3;CL:0002202,5.45e-08,3;CL:0000069,5.45e-08,3;CL:0002632,5.45e-08,3;CL:0002368,5.45e-08,3;CL:0000307,5.45e-08,3;CL:0000377,5.45e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000945,8.21e-17,16;UBERON:0010039,8.21e-17,16;UBERON:0001962,2.61e-12,2;UBERON:0001961,2.61e-12,2;UBERON:0001744,2.61e-12,2;UBERON:0002465,1.69e-08,3;UBERON:0000162,2.58e-08,3;UBERON:0001353,2.58e-08,3;UBERON:0000163,2.58e-08,3;UBERON:0006866,2.58e-08,3;UBERON:0001046,2.58e-08,3;UBERON:0000164,2.58e-08,3;UBERON:0000931,2.58e-08,3;UBERON:0003126,5.45e-08,3;UBERON:0001005,5.45e-08,3;UBERON:0007196,5.45e-08,3;UBERON:0001558,5.45e-08,3;UBERON:0001007,1.21e-07,116;UBERON:0001555,1.21e-07,116;UBERON:0007026,1.21e-07,116;UBERON:0004119,1.76e-07,118;UBERON:0000925,1.76e-07,118;UBERON:0006595,1.76e-07,118;UBERON:0001255,3.59e-07,1;UBERON:0001556,3.59e-07,1;UBERON:0003199,6.93e-07,1;UBERON:0005409,7.81e-07,47;UBERON:0001153,8.98e-07,1;UBERON:0001045,8.98e-07,1|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,3.35984087866154,2.2940928106717,0,0.86152399231815,1.29282739611533,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,1.77351905832569,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0.441683036920787,0.969750506270444,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0.420883711772948,0,0,0.180062129805349,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,13.3653886522116,0,0.406638934253697,1.08005340821801,3.13632444021703,2.83871332870031,3.37160865962052,2.23164330458407,8.89970202745701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,6.37525660306228,0,1.46521299413812,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p3@Syt8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:55925 | |||
|HGNC= | |||
|MCL_coexpression_id=1628 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9R0N6,uniprot:A8Y5C6 | |||
|association_with_transcript=3bp_to_ENSMUST00000118276,NM_018802,uc009kmw.1,uc009kmx.1,uc009kmy.1_5end | |||
|cluster_id=chr7:149620885..149620896,+ | |||
|description=CAGE_peak_3_at_Syt8_5end | |||
|id=chr7:149620885..149620896,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.45e-08,3;CL:0002202,5.45e-08,3;CL:0000069,5.45e-08,3;CL:0002632,5.45e-08,3;CL:0002368,5.45e-08,3;CL:0000307,5.45e-08,3;CL:0000377,5.45e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,8.21e-17,16;UBERON:0010039,8.21e-17,16;UBERON:0001962,2.61e-12,2;UBERON:0001961,2.61e-12,2;UBERON:0001744,2.61e-12,2;UBERON:0002465,1.69e-08,3;UBERON:0000162,2.58e-08,3;UBERON:0001353,2.58e-08,3;UBERON:0000163,2.58e-08,3;UBERON:0006866,2.58e-08,3;UBERON:0001046,2.58e-08,3;UBERON:0000164,2.58e-08,3;UBERON:0000931,2.58e-08,3;UBERON:0003126,5.45e-08,3;UBERON:0001005,5.45e-08,3;UBERON:0007196,5.45e-08,3;UBERON:0001558,5.45e-08,3;UBERON:0001007,1.21e-07,116;UBERON:0001555,1.21e-07,116;UBERON:0007026,1.21e-07,116;UBERON:0004119,1.76e-07,118;UBERON:0000925,1.76e-07,118;UBERON:0006595,1.76e-07,118;UBERON:0001255,3.59e-07,1;UBERON:0001556,3.59e-07,1;UBERON:0003199,6.93e-07,1;UBERON:0005409,7.81e-07,47;UBERON:0001153,8.98e-07,1;UBERON:0001045,8.98e-07,1 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,3.35984087866154,2.2940928106717,0,0.86152399231815,1.29282739611533,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,1.77351905832569,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0.441683036920787,0.969750506270444,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0.420883711772948,0,0,0.180062129805349,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,13.3653886522116,0,0.406638934253697,1.08005340821801,3.13632444021703,2.83871332870031,3.37160865962052,2.23164330458407,8.89970202745701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,6.37525660306228,0,1.46521299413812,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Syt8 | |||
}} |
Revision as of 14:08, 4 August 2015
Short description: | p3@Syt8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Syt8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1628 |
Association with transcript: | 3bp_to_ENSMUST00000118276, NM_018802, uc009kmw.1, uc009kmx.1, uc009kmy.1_5end |
EntrezGene: | 55925 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.45e-08 | 3 |
epithelial cell of tracheobronchial tree | 5.45e-08 | 3 |
branched duct epithelial cell | 5.45e-08 | 3 |
epithelial cell of lower respiratory tract | 5.45e-08 | 3 |
respiratory epithelial cell | 5.45e-08 | 3 |
tracheal epithelial cell | 5.45e-08 | 3 |
tracheoblast | 5.45e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 8.21e-17 | 16 |
food storage organ | 8.21e-17 | 16 |
gut-associated lymphoid tissue | 2.61e-12 | 2 |
mucosa-associated lymphoid tissue | 2.61e-12 | 2 |
lymphoid tissue | 2.61e-12 | 2 |
lymphoid system | 1.69e-08 | 3 |
cloaca | 2.58e-08 | 3 |
anal region | 2.58e-08 | 3 |
embryonic cloaca | 2.58e-08 | 3 |
terminal part of digestive tract | 2.58e-08 | 3 |
hindgut | 2.58e-08 | 3 |
primitive urogenital sinus | 2.58e-08 | 3 |
proctodeum | 2.58e-08 | 3 |
trachea | 5.45e-08 | 3 |
respiratory airway | 5.45e-08 | 3 |
tracheobronchial tree | 5.45e-08 | 3 |
lower respiratory tract | 5.45e-08 | 3 |
digestive system | 1.21e-07 | 116 |
digestive tract | 1.21e-07 | 116 |
primitive gut | 1.21e-07 | 116 |
endoderm-derived structure | 1.76e-07 | 118 |
endoderm | 1.76e-07 | 118 |
presumptive endoderm | 1.76e-07 | 118 |
urinary bladder | 3.59e-07 | 1 |
lower urinary tract | 3.59e-07 | 1 |
egg chamber | 6.93e-07 | 1 |
gastrointestinal system | 7.81e-07 | 47 |
caecum | 8.98e-07 | 1 |
midgut | 8.98e-07 | 1 |