FFCP PHASE1:Mm9::chr1:107253511..107253540,-: Difference between revisions
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{{FFCP|EntrezGene=320311|HGNC=|MCL_coexpression_id=777|UniProt=Q8BG47|association_with_transcript=-224bp_to_ENSMUST00000058688,ENSMUST00000172299,NM_001160368,NM_178779,uc011wpy.1,uc011wpz.1_5end|description=CAGE_peak_3_at_Rnf152_5end|id=chr1:107253511..107253540,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,5.31e-08,23;CL:0000337,5.31e-08,23;CL:0002612,6.18e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.08e-10,5;UBERON:0002315,5.08e-10,5;UBERON:0003076,1.13e-09,12;UBERON:0003057,1.13e-09,12;UBERON:0002240,2.85e-08,6;UBERON:0005174,2.85e-08,6;UBERON:0001137,2.85e-08,6;UBERON:0002257,6.18e-07,3|phase1_expression=0,0,0.909998478779072,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0.430761996159075,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,1.82084814773638,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0,0,0,0,1.14260393761521,2.42955395046775,0,0.191690942036473,0,2.20231761998777,1.0214987046815,0.46081959976873,0.659431438650969,1.09785172322892,0.52091337055676,0.558365998002762,0.56276261003168,1.5279824777681,2.06240009831567,2.98980529678116,2.60959224155421,0,0.0755715601067855,0,0,1.3599426674155,2.15881276655127,3.89865850468601,1.34408066129201,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0.753999547978053,0,14.0261376212314,0,0,0,0.484875253135222,3.72783522436244,3.22058876712702,2.72280718857492,0.255457055208591,0.11981512450592,0.599902730993408,0,0.748953197024114,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,1.0389402227978,0.811206315338788,0,0.124406970610093,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,1.16959989940266,0.219550115291051,0.402619256281115,0.210289948564127,0.102904612379284,0.991256348951394,0,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.494096864172033,0.502670417600539,0,0.38992817423824,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0.610953983535943,0.775809948670503,0.771494018793504,2.78240763346732,3.98547399544926,3.767969468193,5.55287237648102,0.592905254174298,0,0,0,0,0,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,0,1.48856379067401,0.624075346229121,1.51547326768267,0.717589654087649,2.41221760681684,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0,0,0,0,0,0,1.44495530989013,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.851640511249612,0,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0.108005340821801,0,0.436725127492355,0.404593039154462,0.826534557253359,0,3.88844919875379,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0.798049746802062,0.341467211508268,0,0.628839487883947,0.367687016900028,0.888986911206461,1.23621034343337,0.962757628775446,0.758091635291392,1.01391719956096,1.50901073108861,0.749132059759059,1.28050304809739,0.918967503289812,2.38146845641537,1.50649623728312,2.12200142510076,0.824171801606613,0.588795680537589,1.37147700954166,0.532427418478012,0.715308569841963,1.0174249164263,0.752875043322645,0.761531471025089,0.73171189149109,1.05227884575137,0.814824683075171,1.12228454331548,1.42362021749009,0.985044823755635,1.22769312950907,1.23949472948773,0.771626443924566,0.749431733813838,0.935726433781634,0.859484216193193,3.06061331310149,0.661774257358546,0.927471342481686|short_description=p3@Rnf152}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320311 | |||
|HGNC= | |||
|MCL_coexpression_id=777 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BG47 | |||
|association_with_transcript=-224bp_to_ENSMUST00000058688,ENSMUST00000172299,NM_001160368,NM_178779,uc011wpy.1,uc011wpz.1_5end | |||
|cluster_id=chr1:107253511..107253540,- | |||
|description=CAGE_peak_3_at_Rnf152_5end | |||
|id=chr1:107253511..107253540,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.31e-08,23;CL:0000337,5.31e-08,23;CL:0002612,6.18e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.08e-10,5;UBERON:0002315,5.08e-10,5;UBERON:0003076,1.13e-09,12;UBERON:0003057,1.13e-09,12;UBERON:0002240,2.85e-08,6;UBERON:0005174,2.85e-08,6;UBERON:0001137,2.85e-08,6;UBERON:0002257,6.18e-07,3 | |||
|phase1_expression=0,0,0.909998478779072,0,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0.430761996159075,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,1.82084814773638,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0,0,0,0,1.14260393761521,2.42955395046775,0,0.191690942036473,0,2.20231761998777,1.0214987046815,0.46081959976873,0.659431438650969,1.09785172322892,0.52091337055676,0.558365998002762,0.56276261003168,1.5279824777681,2.06240009831567,2.98980529678116,2.60959224155421,0,0.0755715601067855,0,0,1.3599426674155,2.15881276655127,3.89865850468601,1.34408066129201,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0.753999547978053,0,14.0261376212314,0,0,0,0.484875253135222,3.72783522436244,3.22058876712702,2.72280718857492,0.255457055208591,0.11981512450592,0.599902730993408,0,0.748953197024114,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,1.0389402227978,0.811206315338788,0,0.124406970610093,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,1.16959989940266,0.219550115291051,0.402619256281115,0.210289948564127,0.102904612379284,0.991256348951394,0,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0.494096864172033,0.502670417600539,0,0.38992817423824,0.898819408654221,0.648414149624083,0.199141273254367,0,0,0,0.610953983535943,0.775809948670503,0.771494018793504,2.78240763346732,3.98547399544926,3.767969468193,5.55287237648102,0.592905254174298,0,0,0,0,0,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,0,1.48856379067401,0.624075346229121,1.51547326768267,0.717589654087649,2.41221760681684,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.491589944147214,0,0,0,0,0,0,1.44495530989013,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.851640511249612,0,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0.108005340821801,0,0.436725127492355,0.404593039154462,0.826534557253359,0,3.88844919875379,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0.798049746802062,0.341467211508268,0,0.628839487883947,0.367687016900028,0.888986911206461,1.23621034343337,0.962757628775446,0.758091635291392,1.01391719956096,1.50901073108861,0.749132059759059,1.28050304809739,0.918967503289812,2.38146845641537,1.50649623728312,2.12200142510076,0.824171801606613,0.588795680537589,1.37147700954166,0.532427418478012,0.715308569841963,1.0174249164263,0.752875043322645,0.761531471025089,0.73171189149109,1.05227884575137,0.814824683075171,1.12228454331548,1.42362021749009,0.985044823755635,1.22769312950907,1.23949472948773,0.771626443924566,0.749431733813838,0.935726433781634,0.859484216193193,3.06061331310149,0.661774257358546,0.927471342481686 | |||
|short_description=p3@Rnf152 | |||
}} |
Revision as of 14:54, 4 August 2015
Short description: | p3@Rnf152 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rnf152_5end |
Coexpression cluster: | MCL_coexpression_mm9:777 |
Association with transcript: | -224bp_to_ENSMUST00000058688, ENSMUST00000172299, NM_001160368, NM_178779, uc011wpy.1, uc011wpz.1_5end |
EntrezGene: | 320311 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.31e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.31e-08 | 23 |
neuron of the ventral spinal cord | 6.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 5.08e-10 | 5 |
gray matter of spinal cord | 5.08e-10 | 5 |
posterior neural tube | 1.13e-09 | 12 |
chordal neural plate | 1.13e-09 | 12 |
spinal cord | 2.85e-08 | 6 |
dorsal region element | 2.85e-08 | 6 |
dorsum | 2.85e-08 | 6 |
ventral horn of spinal cord | 6.18e-07 | 3 |