FFCP PHASE1:Mm9::chr12:114660209..114660223,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=372|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114660209..114660223,-|id=chr12:114660209..114660223,-|ontology_enrichment_celltype=CL:0000553!6.51e-10!6;CL:0000556!6.51e-10!6;CL:0002031!2.07e-09!25;CL:0000988!2.65e-08!32;CL:0002032!2.65e-08!32;CL:0000037!2.65e-08!32;CL:0000566!2.65e-08!32;CL:0000837!2.65e-08!32;CL:0000838!2.90e-07!12|ontology_enrichment_celltype_v019_2=CL:0000553,1.76e-30,6;CL:0000556,1.76e-30,6;CL:0000050,3.29e-20,9;CL:0002027,9.20e-16,3;CL:0002006,9.20e-16,3;CL:0002024,9.20e-16,3;CL:0000839,7.20e-14,13;CL:0000763,3.47e-11,16;CL:0002031,2.35e-09,25;CL:0000049,2.40e-09,19;CL:0000988,3.83e-07,32;CL:0002032,3.83e-07,32;CL:0000037,3.83e-07,32;CL:0000837,3.83e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.50e-16!48;UBERON:0002390!8.08e-13!45;UBERON:0003061!8.08e-13!45;UBERON:0004177!1.18e-11!29;UBERON:0002405!4.54e-11!70;UBERON:0002370!9.65e-09!23;UBERON:0000974!9.65e-09!23;UBERON:0004807!9.65e-09!23;UBERON:0005058!9.65e-09!23;UBERON:0003351!9.65e-09!23;UBERON:0009113!9.65e-09!23;UBERON:0003295!9.65e-09!23;UBERON:0009722!9.65e-09!23;UBERON:0005562!9.65e-09!23;UBERON:0007690!9.65e-09!23;UBERON:0006562!3.22e-08!24;UBERON:0003408!3.22e-08!24;UBERON:0001557!3.22e-08!24;UBERON:0001042!3.22e-08!24;UBERON:0008814!3.22e-08!24;UBERON:0009145!3.22e-08!24;UBERON:0003081!1.55e-07!88;UBERON:0000072!6.81e-07!27;UBERON:0005057!7.78e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.79e-16,48;UBERON:0002405,7.79e-16,48;UBERON:0002465,2.55e-15,3;UBERON:0002371,3.47e-11,16;UBERON:0001474,1.30e-10,22;UBERON:0004765,1.30e-10,22;UBERON:0001434,1.30e-10,22;UBERON:0001962,1.52e-10,2;UBERON:0001961,1.52e-10,2;UBERON:0001744,1.52e-10,2;UBERON:0002390,6.99e-10,45;UBERON:0003061,6.99e-10,45;UBERON:0003887,4.03e-08,10;UBERON:0002106,4.09e-08,6;UBERON:0004457,4.09e-08,6;UBERON:0000042,4.09e-08,6;UBERON:0004854,4.09e-08,6;UBERON:0009034,4.09e-08,6;UBERON:0002095,4.09e-08,6;UBERON:0004782,4.09e-08,6;UBERON:0003281,4.09e-08,6;UBERON:0009664,4.09e-08,6;UBERON:0002296,4.09e-08,6;UBERON:0005602,4.09e-08,6;UBERON:0001179,4.09e-08,6;UBERON:0006293,4.09e-08,6;UBERON:0002204,4.61e-07,32|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0,0.856003649656029,0.0874204024189974,11.9919514253639,7.49158489342356,1.39912375625629,12.9339487796877,14.9454732630255,4.2438965179803,0,0.397163804803541,0.522399578277871,1.75991665072747,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,5.95557132388495,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.289198713839823,0,0,1.10420759230197,0.969750506270444,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0.347648640384553,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.810676133875177,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0,3.98235415019888,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0.18542530201051,13.4987995830304,0,0,0.565105371014073,1.6403307326523,2.97411625168479,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0,0.537080087002444,0.198681354781265,0.240390899039938,0.443068581523732,0.302899349844443,0.381034033274999,0.705783295957884,0.38983152295901,0.769694733122636,0.584384510907845,0,0,0,0,0.965947970160952,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr12:114660209..114660223,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=372 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:114660209..114660223,- | |||
|description=CAGE_peak_at_chr12:114660209..114660223,- | |||
|id=chr12:114660209..114660223,- | |||
|ontology_enrichment_celltype=CL:0000553!6.51e-10!6;CL:0000556!6.51e-10!6;CL:0002031!2.07e-09!25;CL:0000988!2.65e-08!32;CL:0002032!2.65e-08!32;CL:0000037!2.65e-08!32;CL:0000566!2.65e-08!32;CL:0000837!2.65e-08!32;CL:0000838!2.90e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.76e-30,6;CL:0000556,1.76e-30,6;CL:0000050,3.29e-20,9;CL:0002027,9.20e-16,3;CL:0002006,9.20e-16,3;CL:0002024,9.20e-16,3;CL:0000839,7.20e-14,13;CL:0000763,3.47e-11,16;CL:0002031,2.35e-09,25;CL:0000049,2.40e-09,19;CL:0000988,3.83e-07,32;CL:0002032,3.83e-07,32;CL:0000037,3.83e-07,32;CL:0000837,3.83e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.50e-16!48;UBERON:0002390!8.08e-13!45;UBERON:0003061!8.08e-13!45;UBERON:0004177!1.18e-11!29;UBERON:0002405!4.54e-11!70;UBERON:0002370!9.65e-09!23;UBERON:0000974!9.65e-09!23;UBERON:0004807!9.65e-09!23;UBERON:0005058!9.65e-09!23;UBERON:0003351!9.65e-09!23;UBERON:0009113!9.65e-09!23;UBERON:0003295!9.65e-09!23;UBERON:0009722!9.65e-09!23;UBERON:0005562!9.65e-09!23;UBERON:0007690!9.65e-09!23;UBERON:0006562!3.22e-08!24;UBERON:0003408!3.22e-08!24;UBERON:0001557!3.22e-08!24;UBERON:0001042!3.22e-08!24;UBERON:0008814!3.22e-08!24;UBERON:0009145!3.22e-08!24;UBERON:0003081!1.55e-07!88;UBERON:0000072!6.81e-07!27;UBERON:0005057!7.78e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.79e-16,48;UBERON:0002405,7.79e-16,48;UBERON:0002465,2.55e-15,3;UBERON:0002371,3.47e-11,16;UBERON:0001474,1.30e-10,22;UBERON:0004765,1.30e-10,22;UBERON:0001434,1.30e-10,22;UBERON:0001962,1.52e-10,2;UBERON:0001961,1.52e-10,2;UBERON:0001744,1.52e-10,2;UBERON:0002390,6.99e-10,45;UBERON:0003061,6.99e-10,45;UBERON:0003887,4.03e-08,10;UBERON:0002106,4.09e-08,6;UBERON:0004457,4.09e-08,6;UBERON:0000042,4.09e-08,6;UBERON:0004854,4.09e-08,6;UBERON:0009034,4.09e-08,6;UBERON:0002095,4.09e-08,6;UBERON:0004782,4.09e-08,6;UBERON:0003281,4.09e-08,6;UBERON:0009664,4.09e-08,6;UBERON:0002296,4.09e-08,6;UBERON:0005602,4.09e-08,6;UBERON:0001179,4.09e-08,6;UBERON:0006293,4.09e-08,6;UBERON:0002204,4.61e-07,32 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0,0.856003649656029,0.0874204024189974,11.9919514253639,7.49158489342356,1.39912375625629,12.9339487796877,14.9454732630255,4.2438965179803,0,0.397163804803541,0.522399578277871,1.75991665072747,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52343472721246,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,5.95557132388495,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.289198713839823,0,0,1.10420759230197,0.969750506270444,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0.347648640384553,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.810676133875177,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0,3.98235415019888,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0.18542530201051,13.4987995830304,0,0,0.565105371014073,1.6403307326523,2.97411625168479,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0,0.537080087002444,0.198681354781265,0.240390899039938,0.443068581523732,0.302899349844443,0.381034033274999,0.705783295957884,0.38983152295901,0.769694733122636,0.584384510907845,0,0,0,0,0.965947970160952,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:114660209..114660223,- | |||
}} |
Latest revision as of 19:47, 4 August 2015
Short description: | p@chr12:114660209..114660223, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114660209..114660223, - |
Coexpression cluster: | MCL_coexpression_mm9:372 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.76e-30 | 6 |
megakaryocyte | 1.76e-30 | 6 |
megakaryocyte-erythroid progenitor cell | 3.29e-20 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 9.20e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 9.20e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 9.20e-16 | 3 |
myeloid lineage restricted progenitor cell | 7.20e-14 | 13 |
myeloid cell | 3.47e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 2.35e-09 | 25 |
common myeloid progenitor | 2.40e-09 | 19 |
hematopoietic cell | 3.83e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.83e-07 | 32 |
hematopoietic stem cell | 3.83e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.83e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.79e-16 | 48 |
immune system | 7.79e-16 | 48 |
lymphoid system | 2.55e-15 | 3 |
bone marrow | 3.47e-11 | 16 |
bone element | 1.30e-10 | 22 |
skeletal element | 1.30e-10 | 22 |
skeletal system | 1.30e-10 | 22 |
gut-associated lymphoid tissue | 1.52e-10 | 2 |
mucosa-associated lymphoid tissue | 1.52e-10 | 2 |
lymphoid tissue | 1.52e-10 | 2 |
hematopoietic system | 6.99e-10 | 45 |
blood island | 6.99e-10 | 45 |
intraembryonic coelom | 4.03e-08 | 10 |
spleen | 4.09e-08 | 6 |
cavity lining | 4.09e-08 | 6 |
serous membrane | 4.09e-08 | 6 |
gastrointestinal system mesentery | 4.09e-08 | 6 |
stomach region | 4.09e-08 | 6 |
mesentery | 4.09e-08 | 6 |
gastrointestinal system serosa | 4.09e-08 | 6 |
mesentery of stomach | 4.09e-08 | 6 |
gut mesentery | 4.09e-08 | 6 |
dorsal mesentery | 4.09e-08 | 6 |
dorsal mesogastrium | 4.09e-08 | 6 |
peritoneal cavity | 4.09e-08 | 6 |
spleen primordium | 4.09e-08 | 6 |
musculoskeletal system | 4.61e-07 | 32 |