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FFCP PHASE1:Mm9::chr1:136258510..136258575,-: Difference between revisions

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{{FFCP|EntrezGene=57439|HGNC=|MCL_coexpression_id=24|UniProt=Q9JJB9,Q9CSF0|association_with_transcript=0bp_to_ENSMUST00000049470,NM_001042485,NM_020588,uc007crq.1,uc007crr.1,uc007crs.1_5end|description=CAGE_peak_1_at_Tmem183a_5end|id=chr1:136258510..136258575,-|ontology_enrichment_celltype=CL:0000117!1.11e-07!23;CL:0000337!1.11e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-07,23;CL:0000337,1.11e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.64e-09!15;UBERON:0002365!3.16e-09!25;UBERON:0002330!3.16e-09!25;UBERON:0009854!1.13e-08!23;UBERON:0009856!1.13e-08!23;UBERON:0000160!1.59e-08!43;UBERON:0001242!1.92e-08!13;UBERON:0000060!1.92e-08!13;UBERON:0001262!1.92e-08!13;UBERON:0004786!1.92e-08!13;UBERON:0002107!2.19e-08!22;UBERON:0007499!2.19e-08!22;UBERON:0006925!2.19e-08!22;UBERON:0009497!2.19e-08!22;UBERON:0000015!2.19e-08!22;UBERON:0002423!2.19e-08!22;UBERON:0006235!2.19e-08!22;UBERON:0008835!2.19e-08!22;UBERON:0003894!2.19e-08!22;UBERON:0004161!2.19e-08!22;UBERON:0008836!2.19e-08!22;UBERON:0005409!3.26e-08!59;UBERON:0001007!9.56e-07!128;UBERON:0001555!9.56e-07!128;UBERON:0007026!9.56e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.03e-10,31;UBERON:0000344,1.64e-09,15;UBERON:0002365,3.16e-09,25;UBERON:0002330,3.16e-09,25;UBERON:0005409,8.57e-09,47;UBERON:0009854,1.13e-08,23;UBERON:0009856,1.13e-08,23;UBERON:0001242,1.92e-08,13;UBERON:0001262,1.92e-08,13;UBERON:0004786,1.92e-08,13;UBERON:0002107,2.19e-08,22;UBERON:0007499,2.19e-08,22;UBERON:0006925,2.19e-08,22;UBERON:0009497,2.19e-08,22;UBERON:0000015,2.19e-08,22;UBERON:0002423,2.19e-08,22;UBERON:0006235,2.19e-08,22;UBERON:0008835,2.19e-08,22;UBERON:0003894,2.19e-08,22;UBERON:0004161,2.19e-08,22;UBERON:0008836,2.19e-08,22|phase1_expression=38.4357233051506,149.710449877286,166.98472085596,154.861676189097,167.800069532026,82.4287225087379,84.1005506143892,19.3684985162364,61.243094135975,55.9414217909564,33.0450678675225,34.4615726859853,20.8864890516071,22.2047822144253,26.9818907070687,30.3712901084739,39.1754651751762,17.6658812600613,19.0589062711977,23.7658205006897,42.691731655837,20.8510997521859,20.8959831311148,67.9967796871978,66.7581007905465,117.143320679464,110.275071016723,90.9288601934452,78.4796722354824,72.3326472411001,60.0889683875876,15.2407361630311,17.8368788399525,15.8481681015439,43.3277429626912,41.0599574035476,38.7921776898501,23.8563029520037,25.7840663692854,24.6056159667685,36.4703522579229,31.4200923080885,35.9277661243054,14.7299277031425,17.6395860321955,28.816840089384,21.1245662973971,29.4333961113603,30.7560655828261,25.2758868796568,23.3777324114355,44.5632949531412,34.8987820600092,29.7398478224651,30.9206295211067,25.7259436035947,23.4957420749781,19.5955395065428,57.6601913449854,57.6600167406516,70.3552857891859,27.4464070975997,21.3430751066673,15.2982951937838,7.9109309005358,14.9200824138681,16.1784059679939,11.9107674649682,53.8149087880999,51.9772862577009,50.4779907243317,39.9911378165325,40.1980744531937,60.0204916153275,53.9610001832671,44.122501757281,22.0231761998777,30.1342117881043,32.8717981168361,67.5257793178592,59.0095301235542,59.3841242434706,42.1566328492085,36.0168070420275,31.9348337853533,35.3554302568401,39.8640706237488,45.1086658897227,33.5467036466005,33.3270580070924,13.0439019915755,60.229671388697,51.677821361789,67.4628989547271,86.42026352054,95.8777538388298,45.2231032824241,28.9731548382698,24.6796704372725,25.4404493647445,27.4644668564527,12.8326477414318,5.09610479413291,21.3320010945999,33.5561113567382,32.4300627808126,31.3425155909166,57.4344914986872,24.081223179187,15.7348667408714,23.4205191134283,18.8768596553528,25.1370892009104,17.7852715852095,19.6373140916627,23.24831939599,35.5960753537498,16.33972733195,19.4614321428972,20.8679236432158,23.4092009568017,23.7588874036259,41.0061874679869,28.6925181071316,26.3902850584953,65.3970061333994,27.3178483873498,22.7963037777495,28.8449415455857,27.2618963716777,21.5025283324754,56.9214215071276,29.0286614721102,30.4301394223093,30.5448425502553,28.2299797737898,20.1641940423626,21.1491850037158,20.4705434331277,46.0867664391378,28.7566178947575,32.6460988295532,30.0703756774933,28.6339153887859,27.0785266622285,24.8540617352609,25.7679742539254,23.0245999957724,37.9399667561802,34.0390944302075,27.0964731212481,22.1387689751851,20.8535436919198,28.5566776548177,23.4591635505056,22.4908721504897,18.9597560574573,18.2717014051448,27.8480229407681,27.9619792922928,24.1561841780529,28.0896815879183,29.8298366837365,21.8408297239618,22.0601971428951,25.8112678672953,20.1205051049714,22.5357110768637,20.2408615393581,20.8492679380451,15.6462802423502,14.3275987676826,9.66020507280623,13.9574675510787,28.1788531075931,52.6871615381936,107.386104469734,59.765828065961,28.5806255717213,30.190767341857,29.5106486427594,27.6306428733979,26.6853652613844,29.2947464213341,70.2303011085877,31.6221993070101,29.4062194296315,31.0372096384195,27.8798644580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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:57439
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=uniprot:Q9JJB9,uniprot:Q9CSF0
|association_with_transcript=0bp_to_ENSMUST00000049470,NM_001042485,NM_020588,uc007crq.1,uc007crr.1,uc007crs.1_5end
|cluster_id=chr1:136258510..136258575,-
|description=CAGE_peak_1_at_Tmem183a_5end
|id=chr1:136258510..136258575,-
|ontology_enrichment_celltype=CL:0000117!1.11e-07!23;CL:0000337!1.11e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-07,23;CL:0000337,1.11e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!1.64e-09!15;UBERON:0002365!3.16e-09!25;UBERON:0002330!3.16e-09!25;UBERON:0009854!1.13e-08!23;UBERON:0009856!1.13e-08!23;UBERON:0000160!1.59e-08!43;UBERON:0001242!1.92e-08!13;UBERON:0000060!1.92e-08!13;UBERON:0001262!1.92e-08!13;UBERON:0004786!1.92e-08!13;UBERON:0002107!2.19e-08!22;UBERON:0007499!2.19e-08!22;UBERON:0006925!2.19e-08!22;UBERON:0009497!2.19e-08!22;UBERON:0000015!2.19e-08!22;UBERON:0002423!2.19e-08!22;UBERON:0006235!2.19e-08!22;UBERON:0008835!2.19e-08!22;UBERON:0003894!2.19e-08!22;UBERON:0004161!2.19e-08!22;UBERON:0008836!2.19e-08!22;UBERON:0005409!3.26e-08!59;UBERON:0001007!9.56e-07!128;UBERON:0001555!9.56e-07!128;UBERON:0007026!9.56e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.03e-10,31;UBERON:0000344,1.64e-09,15;UBERON:0002365,3.16e-09,25;UBERON:0002330,3.16e-09,25;UBERON:0005409,8.57e-09,47;UBERON:0009854,1.13e-08,23;UBERON:0009856,1.13e-08,23;UBERON:0001242,1.92e-08,13;UBERON:0001262,1.92e-08,13;UBERON:0004786,1.92e-08,13;UBERON:0002107,2.19e-08,22;UBERON:0007499,2.19e-08,22;UBERON:0006925,2.19e-08,22;UBERON:0009497,2.19e-08,22;UBERON:0000015,2.19e-08,22;UBERON:0002423,2.19e-08,22;UBERON:0006235,2.19e-08,22;UBERON:0008835,2.19e-08,22;UBERON:0003894,2.19e-08,22;UBERON:0004161,2.19e-08,22;UBERON:0008836,2.19e-08,22
|phase1_expression=38.4357233051506,149.710449877286,166.98472085596,154.861676189097,167.800069532026,82.4287225087379,84.1005506143892,19.3684985162364,61.243094135975,55.9414217909564,33.0450678675225,34.4615726859853,20.8864890516071,22.2047822144253,26.9818907070687,30.3712901084739,39.1754651751762,17.6658812600613,19.0589062711977,23.7658205006897,42.691731655837,20.8510997521859,20.8959831311148,67.9967796871978,66.7581007905465,117.143320679464,110.275071016723,90.9288601934452,78.4796722354824,72.3326472411001,60.0889683875876,15.2407361630311,17.8368788399525,15.8481681015439,43.3277429626912,41.0599574035476,38.7921776898501,23.8563029520037,25.7840663692854,24.6056159667685,36.4703522579229,31.4200923080885,35.9277661243054,14.7299277031425,17.6395860321955,28.816840089384,21.1245662973971,29.4333961113603,30.7560655828261,25.2758868796568,23.3777324114355,44.5632949531412,34.8987820600092,29.7398478224651,30.9206295211067,25.7259436035947,23.4957420749781,19.5955395065428,57.6601913449854,57.6600167406516,70.3552857891859,27.4464070975997,21.3430751066673,15.2982951937838,7.9109309005358,14.9200824138681,16.1784059679939,11.9107674649682,53.8149087880999,51.9772862577009,50.4779907243317,39.9911378165325,40.1980744531937,60.0204916153275,53.9610001832671,44.122501757281,22.0231761998777,30.1342117881043,32.8717981168361,67.5257793178592,59.0095301235542,59.3841242434706,42.1566328492085,36.0168070420275,31.9348337853533,35.3554302568401,39.8640706237488,45.1086658897227,33.5467036466005,33.3270580070924,13.0439019915755,60.229671388697,51.677821361789,67.4628989547271,86.42026352054,95.8777538388298,45.2231032824241,28.9731548382698,24.6796704372725,25.4404493647445,27.4644668564527,12.8326477414318,5.09610479413291,21.3320010945999,33.5561113567382,32.4300627808126,31.3425155909166,57.4344914986872,24.081223179187,15.7348667408714,23.4205191134283,18.8768596553528,25.1370892009104,17.7852715852095,19.6373140916627,23.24831939599,35.5960753537498,16.33972733195,19.4614321428972,20.8679236432158,23.4092009568017,23.7588874036259,41.0061874679869,28.6925181071316,26.3902850584953,65.3970061333994,27.3178483873498,22.7963037777495,28.8449415455857,27.2618963716777,21.5025283324754,56.9214215071276,29.0286614721102,30.4301394223093,30.5448425502553,28.2299797737898,20.1641940423626,21.1491850037158,20.4705434331277,46.0867664391378,28.7566178947575,32.6460988295532,30.0703756774933,28.6339153887859,27.0785266622285,24.8540617352609,25.7679742539254,23.0245999957724,37.9399667561802,34.0390944302075,27.0964731212481,22.1387689751851,20.8535436919198,28.5566776548177,23.4591635505056,22.4908721504897,18.9597560574573,18.2717014051448,27.8480229407681,27.9619792922928,24.1561841780529,28.0896815879183,29.8298366837365,21.8408297239618,22.0601971428951,25.8112678672953,20.1205051049714,22.5357110768637,20.2408615393581,20.8492679380451,15.6462802423502,14.3275987676826,9.66020507280623,13.9574675510787,28.1788531075931,52.6871615381936,107.386104469734,59.765828065961,28.5806255717213,30.190767341857,29.5106486427594,27.6306428733979,26.6853652613844,29.2947464213341,70.2303011085877,31.6221993070101,29.4062194296315,31.0372096384195,27.8798644580342,70.1079138750293,66.1382432616564,80.6522156680187,42.1062740115841,25.5916668245793,29.3040112750009,19.3468761453049,18.2315337937568,24.8280802411728,21.879841844993,28.6363687080428,29.5157608341785,37.3893406683056,91.0109565157547,37.8738389975533,41.670506963999,37.1022485435009,46.2521076765787,37.1412826018722,40.4855104332458,38.8389785558594,44.4250521363597,38.4385978463314,44.5681440234799,39.8190814005299,44.9334249284967,70.2169280692971,75.8851059197689,100.830695964944,21.0618636789929,35.4348940010807,30.4744505946588,25.4617628662782,27.2240688014662,21.6083072099942,19.5195785526531,25.9527751650872,17.1822307075748,19.4888926890922,22.1642128433907,19.8274610806043,21.0675677876393,18.659728557015,31.6661696272472,16.3171705145613,44.2587845717133,35.5958402733105,26.4908473479857,28.5996515284976,31.311574566945,12.3710754330143,28.7112479668794,24.2072021463916,22.1886099664783,21.0292542198246,23.6166594527338,27.7415000173056,26.717506310543,19.8733983379692,20.9502522311657,26.9909905794318,19.7296718439493,25.4633813244175,25.8990265372186,19.1365342648141,35.84118735179,26.9486506132029,27.8137672407571,29.7996026014319,33.0738120026465,31.6658202382245,27.6518273689997,23.2661586865604,21.0333453246986,28.4433082142234,41.1132573442495,42.2855727317566,14.6389030474129,31.330630361448,26.9066062268129,27.2208034490122,23.0542303734956,19.2638323010236,20.7331765958672,18.5723618959906,18.3043932289694,27.3263371414328,70.5690873775878,25.7222554588709,26.8030948315203,26.718625743173,23.5163517686179,22.1590214655833,53.0495122666328,24.1052892613663,26.3141156428693,22.4961686079913,19.4454253738197,25.2413732386286,30.2094243263466,29.2836061704349,30.2561605389062,26.7307273938187,32.3387938702352,46.7788602827406,28.4702394223022,31.1078784704079,28.9454313402427,31.1541561061558,30.3523963607187,31.9628500932025,31.986887365705,53.9217240487101,60.2709625806837,43.4937519160848,115.557052430259,28.8566933864879,28.789777339535,30.9177389467036,28.1568415181454,27.7088045804876,27.2268793658149,36.1968189866181,32.6112561163961,32.1306880698588,70.8553815394349,24.0168451677415,29.1924310017836,21.4665900474489,20.917252499425,18.2607229580831,23.4443998641893,22.3563536107142,21.5626709674883,21.7077867388517,21.871353509985,22.2825869152418,23.5848071390201,20.9741814775918,25.1285339690373,27.6611068010558,31.5220053791172,30.8615666736596,26.3578847691603,22.4099929077341,27.0262764649702,24.7254692760808,35.5851509271249,45.1414893631827,37.8383734553435,33.6037422650239,28.6447756719698,23.3720327987415,30.8287133896789,25.6833925112498,29.7009900101995,30.1715206160228,31.2668262199101,27.4412965228465,44.7323468087801,39.5034624667021,29.1954465839569,29.1728060481953,35.843850809385,34.1948925717026,25.1138802415825,28.2268028417285,27.9199712344879,22.2373546352142,29.9105573870483,23.5782926732595,29.0288673156635,30.6040228495275,29.6941374500521,28.1013277857013,30.3616933975521,35.8811150062491,21.0163809409686,32.3837624295674,24.0008476669791,28.396128985494,30.0429599333624,30.522747492789,27.6681578421072,27.2459037411198,33.1099630899718,27.6223197009735,27.1608227691724,24.6902599529405,30.9637397304095,33.1960105605649,28.6461730218783,29.4379998253335,27.3927387593221,34.9734809113124,25.2646137121041,26.644010701989,19.3201215389532,22.9415075884296,18.3175590140133
|short_description=p1@Tmem183a
}}

Revision as of 20:13, 4 August 2015

Short description:p1@Tmem183a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tmem183a_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000049470, NM_001042485, NM_020588, uc007crq.1, uc007crr.1, uc007crs.1_5end
EntrezGene:57439
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Tmem183a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G738.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5149.71
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6166.98
CD326+ enterocyte, pool1.CNhs13542.11848-124I3154.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I4167.80
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I782.43
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I884.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E761.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F255.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E633.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F134.46
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E420.89
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A126.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.37
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A539.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.67
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A623.77
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A342.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I920.90
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D168.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D266.76
GP2+ M cell, pool1.CNhs13228.11845-124H9117.14
GP2+ M cell, pool2.CNhs13231.11846-124I1110.28
GP2+ M cell, pool3.CNhs13240.11847-124I290.93
Ileum epithelium, pool1.CNhs13199.10252-104B978.48
Ileum epithelium, pool2.CNhs13232.10253-104C172.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C860.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F543.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F641.06
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F738.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G936.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H231.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H435.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B328.82
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C229.43
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B830.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C444.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A234.90
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A130.92
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.50
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.60
Mouse Granule cells, donor1.CNhs12131.11713-123C357.66
Mouse Granule cells, donor2.CNhs12357.11731-123E357.66
Mouse Granule cells, donor3.CNhs12108.11636-122C770.36
Mouse Meningeal cells, donor1.CNhs12132.11716-123C627.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D121.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.92
Mouse Microglia, donor1.CNhs12629.11718-123C816.18
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D553.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F551.98
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D950.48
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F139.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D540.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D260.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F253.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D644.12
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F330.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D467.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F459.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D859.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E442.16
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F639.86
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.11
Mouse Schwann, donor1.CNhs12507.11728-123D933.55
Mouse Schwann, donor2.CNhs12573.11746-123F933.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F760.23
Mouse hepatocyte, donor1.CNhs13078.11714-123C451.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C867.46
Mouse hepatocyte, donor6.CNhs13090.11822-124F486.42
Mouse hepatocyte, donor8.CNhs13091.11824-124F695.88
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A745.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I825.44
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G133.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G232.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G331.34
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B657.43
accessory axillary lymph node, adult.CNhs10475.1063-29H924.08
adrenal gland, adult.CNhs10508.49-24D715.73
adrenal gland, embryo E14.CNhs11038.406-44C523.42
adrenal gland, embryo E16.CNhs11004.1254-43D618.88
adrenal gland, embryo E17.CNhs11043.1263-45I125.14
adrenal gland, embryo E18.CNhs11026.1262-18F517.79
adrenal gland, neonate N00.CNhs11191.1311-23C119.64
adrenal gland, neonate N25.CNhs11223.1377-27I323.25
amnion, adult pregnant day17.5.CNhs10488.583-22A835.60
aorta, adult.CNhs10498.46-23H116.34
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F520.87
bone (os femoris), neonate N16.CNhs11225.1525-43A623.41
bone (os femoris), neonate N20.CNhs11195.1350-25C323.76
cecum, adult.CNhs10467.37-13H441.01
cerebellum, adult.CNhs10494.15-8B228.69
cerebellum, neonate N30.CNhs11135.1395-42I226.39
colon, adult.CNhs10468.36-18H765.40
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C727.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.84
corpora quadrigemina, adult.CNhs10501.16-22A427.26
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F156.92
cortex, adult.CNhs10473.12-14D529.03
cortex, neonate N30.CNhs11107.1392-42F230.43
diencephalon, adult.CNhs10482.20-12F230.54
diencephalon, neonate N30.CNhs11201.1388-42B228.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A221.15
epididymis, adult.CNhs10490.58-23B220.47
eyeball, adult.CNhs10484.31-12G446.09
eyeball, embryo E12.CNhs11016.345-16C628.76
eyeball, embryo E14.CNhs10521.399-16E232.65
eyeball, embryo E15.CNhs10593.426-16C930.07
eyeball, embryo E17.CNhs11023.1261-18D428.63
eyeball, neonate N00.CNhs11207.633-15C627.08
eyeball, neonate N01.CNhs11140.1532-43E724.85
eyeball, neonate N02.CNhs11205.1551-44G825.77
eyeball, neonate N16.CNhs11188.777-19A223.02
forelimb, embryo E11.CNhs10596.335-25E237.94
forelimb, embryo E12.CNhs10600.359-14H234.04
forelimb, embryo E13.CNhs10589.384-1E227.10
forelimb, embryo E14.CNhs10577.413-26A822.14
forelimb, embryo E15.CNhs11007.437-20E720.85
forelimb, embryo E17.CNhs10598.1517-43C428.56
forelimb, embryo E18.CNhs11008.1520-43B523.46
gonad, embryo E13.CNhs11044.1564-45I622.49
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.96
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D218.27
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D527.85
heart, embryo E11.CNhs10586.331-24E927.96
heart, embryo E12.CNhs11015.353-12F524.16
heart, embryo E13.CNhs11013.376-3I928.09
heart, embryo E14.CNhs10597.403-26D429.83
heart, embryo E15.CNhs11017.431-16C821.84
heart, embryo E16.CNhs11021.457-17C622.06
heart, embryo E17.CNhs11025.479-18E525.81
heart, embryo E18.CNhs11030.1283-20G320.12
heart, neonate N00.CNhs11213.639-21E322.54
heart, neonate N03.CNhs11221.1349-25I220.24
heart, neonate N10.CNhs11118.749-24G120.85
heart, neonate N16.CNhs11209.782-15G115.65
heart, neonate N20.CNhs11127.821-26I614.33
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D213.96
hippocampus, adult.CNhs10478.13-16E828.18
hippocampus, neonate N00.CNhs11228.627-43G152.69
intestinal mucosa, adult.CNhs10506.860-29I3107.39
intestine, adult.CNhs10496.178-9A359.77
intestine, embryo E12.CNhs11019.1251-16I528.58
intestine, embryo E13.CNhs11010.381-16D530.19
intestine, embryo E15.CNhs10602.976-16D829.51
intestine, embryo E16.CNhs10585.463-22H427.63
intestine, embryo E17.CNhs10582.482-18D326.69
intestine, embryo E18.CNhs10526.1289-20F729.29
intestine, neonate N00.CNhs11126.644-26D170.23
intestine, neonate N01.CNhs11192.1322-23E931.62
intestine, neonate N06.CNhs11102.688-20B829.41
intestine, neonate N07.CNhs11095.720-20F231.04
intestine, neonate N10.CNhs11098.755-23A527.88
intestine, neonate N20.CNhs11187.827-18D170.11
intestine, neonate N25.CNhs11121.1352-25E366.14
intestine, neonate N30.CNhs11131.1384-42G180.65
kidney, embryo E14.CNhs10606.411-4I942.11
kidney, embryo E15.CNhs10997.434-16F825.59
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I219.35
kidney, embryo E18.CNhs11001.1288-20C718.23
kidney, neonate N00.CNhs11214.646-21G724.83
kidney, neonate N10.CNhs11206.758-6D521.88
kidney, neonate N20.CNhs11113.832-19I128.64
kidney, neonate N25.CNhs11122.1353-25F329.52
kidney, neonate N30.CNhs11203.1385-42H137.39
liver, adult pregnant day01.CNhs10466.508-5B291.01
liver, embryo E12.CNhs10601.355-15F837.87
liver, embryo E13.CNhs10524.378-3H641.67
liver, embryo E14.CNhs10594.409-16E137.10
liver, embryo E15.CNhs10520.433-16D746.25
liver, embryo E16.CNhs10523.462-17F537.14
liver, embryo E17.CNhs10510.481-18A340.49
liver, embryo E18.CNhs10579.499-43G438.84
liver, neonate N00.CNhs11117.641-24F444.43
liver, neonate N03.CNhs11123.1345-25G238.44
liver, neonate N06.CNhs11101.684-20A844.57
liver, neonate N07.CNhs11103.716-20H239.82
liver, neonate N10.CNhs11115.751-24B944.93
liver, neonate N20.CNhs11220.823-25A370.22
liver, neonate N25.CNhs11198.1368-26H175.89
liver, neonate N30.CNhs11106.1382-42D1100.83
lung, adult.CNhs10474.28-22B121.06
lung, embryo E12.CNhs10522.354-16G235.43
lung, embryo E14.CNhs10604.404-26F830.47
lung, embryo E15.CNhs11020.432-17C525.46
lung, embryo E16.CNhs10998.458-17B627.22
lung, embryo E17.CNhs10605.480-44A621.61
lung, embryo E18.CNhs10583.1287-20I619.52
lung, neonate N00.CNhs11224.640-42C625.95
lung, neonate N06.CNhs11212.683-20E517.18
lung, neonate N07.CNhs11111.715-19A319.49
lung, neonate N10.CNhs11219.750-23E622.16
lung, neonate N20.CNhs11109.822-18A419.83
lung, neonate N25.CNhs11119.1359-25C721.07
lung, neonate N30.CNhs11133.1394-42H218.66
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A131.67
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.32
mammary gland, adult lactating day02.CNhs10480.595-22B644.26
mammary gland, adult pregnant day19.CNhs10476.588-5H235.60
medulla oblongata, adult.CNhs10477.17-12C226.49
medulla oblongata, neonate N30.CNhs11200.1396-42A328.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C731.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.37
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E128.71
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.21
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.03
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.62
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D426.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.87
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.95
olfactory brain, adult.CNhs10489.18-22I926.99
ovary, adult.CNhs10507.91-2I719.73
ovary, embryo E18.CNhs11040.505-44H725.46
ovary, neonate N00.CNhs11217.1299-22I425.90
oviduct, adult pregnant day01.CNhs10500.988-6G619.14
pancreas, adult.CNhs10486.34-16E435.84
pancreas, embryo E14.CNhs11012.405-44F426.95
pancreas, embryo E15.CNhs11042.1556-45F227.81
pancreas, embryo E16.CNhs11003.460-26E529.80
pancreas, embryo E17.CNhs10599.1558-45G333.07
pancreas, embryo E18.CNhs10580.1535-43I731.67
pancreas, neonate N00.CNhs11105.645-26G927.65
pancreas, neonate N01.CNhs11138.1531-43D723.27
pancreas, neonate N02.CNhs11139.1539-43D821.03
pancreas, neonate N16.CNhs11136.787-43B628.44
pancreas, neonate N25.CNhs11094.1555-45E241.11
pancreas, neonate N30.CNhs11182.1548-44H542.29
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E631.33
pituitary gland, embryo E13.CNhs11009.370-44C726.91
pituitary gland, embryo E14.CNhs11037.398-44A527.22
pituitary gland, embryo E15.CNhs10592.427-16B923.05
pituitary gland, embryo E16.CNhs11036.449-43F619.26
pituitary gland, embryo E17.CNhs11039.1265-44F520.73
pituitary gland, neonate N00.CNhs11190.1308-22E918.57
placenta, adult pregnant day10.CNhs10472.539-13I718.30
placenta, adult pregnant day17.CNhs10464.577-18G327.33
prostate, adult.CNhs10470.859-1F870.57
skin, adult.CNhs10492.30-1C325.72
skin, neonate N00.CNhs11124.650-25G426.80
skin, neonate N03.CNhs11215.662-22H326.72
skin, neonate N06.CNhs11097.693-20I523.52
skin, neonate N10.CNhs11108.762-6C422.16
small intestine, neonate N16.CNhs11114.790-21I153.05
spinal cord, adult.CNhs10505.24-13C924.11
spleen, adult.CNhs10465.25-2G226.31
spleen, embryo E16.CNhs11035.461-43C122.50
spleen, embryo E18.CNhs11011.1271-21F219.45
spleen, neonate N10.CNhs11116.752-24D125.24
spleen, neonate N20.CNhs11112.824-19H130.21
spleen, neonate N25.CNhs11099.1354-25G329.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C926.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D332.34
stomach, adult.CNhs10503.33-1H646.78
stomach, embryo E12.CNhs10588.356-43E328.47
stomach, embryo E15.CNhs10603.1252-16G831.11
stomach, embryo E16.CNhs11022.459-17D428.95
stomach, embryo E17.CNhs11006.1035-18D531.15
stomach, embryo E18.CNhs10999.1286-20C630.35
stomach, neonate N03.CNhs11193.1340-24B831.96
stomach, neonate N07.CNhs11210.718-18A931.99
stomach, neonate N25.CNhs11104.1355-25E453.92
stomach, neonate N30.CNhs11134.1386-42I160.27
submandibular gland, adult.CNhs10469.59-29C143.49
testis, adult.CNhs10504.57-7G5115.56
testis, embryo E13.CNhs11031.389-23F528.86
testis, embryo E15.CNhs11034.443-27C528.79
testis, embryo E16.CNhs11033.470-26G530.92
testis, embryo E17.CNhs11029.486-18I528.16
testis, embryo E18.CNhs11027.503-18G527.71
testis, neonate N00.CNhs11189.1300-22B727.23
testis, neonate N07.CNhs11222.726-26I436.20
testis, neonate N10.CNhs11204.763-44D932.61
testis, neonate N20.CNhs11110.839-18H332.13
testis, neonate N30.CNhs11130.1391-42E270.86
thymus, adult.CNhs10471.38-12B524.02
thymus, embryo E14.CNhs11041.402-44I429.19
thymus, embryo E15.CNhs11005.430-45I221.47
thymus, embryo E16.CNhs11002.456-26C520.92
thymus, embryo E17.CNhs10581.478-18C118.26
thymus, embryo E18.CNhs10595.1273-19G423.44
thymus, neonate N02.CNhs11181.1541-43F822.36
thymus, neonate N03.CNhs11137.2104-43C721.56
thymus, neonate N06.CNhs11197.681-26C421.71
thymus, neonate N07.CNhs11211.713-19D321.87
thymus, neonate N10.CNhs11194.748-24E422.28
thymus, neonate N20.CNhs11186.820-7A223.58
thymus, neonate N25.CNhs11125.1362-25G720.97
thymus, neonate N30.CNhs11132.1393-42G225.13
tongue, adult.CNhs10499.32-1B427.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H331.52
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F730.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G526.36
urinary bladder, adult.CNhs10481.879-12E422.41
uterus, adult pregnant day19.CNhs10497.590-15F527.03
uterus, adult.CNhs10509.92-27E524.73
vagina, adult.CNhs10502.89-27D535.59
vesicular gland, adult.CNhs10491.51-27F845.14
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.84
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.83
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I844.73
whole body, embryo E12.CNhs10587.857-27C939.50
whole body, embryo E13.CNhs10512.372-23H229.20
whole body, embryo E14.5.CNhs10578.420-27D229.17
whole body, embryo E14.CNhs10519.395-14B135.84
whole body, embryo E16.CNhs10514.453-14F234.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G525.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.23
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G527.92
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.24
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.91
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G529.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G529.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.88
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.38
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G528.40
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.04
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G530.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.96
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G533.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G528.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.44
whole body, embryo E17.5.CNhs10513.490-9F927.39
whole body, embryo E17.CNhs10517.475-3I534.97
whole body, embryo E18.CNhs10516.493-3B325.26
whole body, neonate N00.CNhs10525.657-19C226.64
whole body, neonate N01.CNhs10576.659-23C619.32
whole body, neonate N06.CNhs10515.692-21D122.94
whole body, neonate N10.CNhs10518.761-6B418.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.11e-0723
neuroblast (sensu Vertebrata)1.11e-0723

Uber anatomy
Ontology termp-valuen
intestine8.03e-1031
mucosa1.64e-0915
exocrine gland3.16e-0925
exocrine system3.16e-0925
gastrointestinal system8.57e-0947
digestive tract diverticulum1.13e-0823
sac1.13e-0823
intestinal mucosa1.92e-0813
wall of intestine1.92e-0813
gastrointestinal system mucosa1.92e-0813
liver2.19e-0822
epithelial sac2.19e-0822
digestive gland2.19e-0822
epithelium of foregut-midgut junction2.19e-0822
anatomical boundary2.19e-0822
hepatobiliary system2.19e-0822
foregut-midgut junction2.19e-0822
hepatic diverticulum2.19e-0822
liver primordium2.19e-0822
septum transversum2.19e-0822
liver bud2.19e-0822
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