Personal tools

FFCP PHASE1:Mm9::chr12:120476623..120476632,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=320910|HGNC=|UniProt=Q0VBD0|association_with_transcript=116bp_to_NM_177290,uc007pik.1,uc007pil.1,uc007pim.1,uc011yvv.1_5end|description=CAGE_peak_16_at_Itgb8_5end|id=chr12:120476623..120476632,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000217,4.07e-21,2;CL:0000328,4.07e-21,2;CL:0002573,4.07e-21,2;CL:0002376,4.07e-21,2;CL:0000218,4.07e-21,2;CL:0000692,4.07e-21,2;CL:0002377,4.07e-21,2;CL:0002375,4.07e-21,2;CL:0000215,1.99e-14,3;CL:0000710,3.65e-11,1;CL:0002077,3.65e-11,1;CL:0005014,3.65e-11,1;CL:0002315,3.65e-11,1;CL:0002490,3.65e-11,1;CL:0000815,5.74e-11,1;CL:0000792,5.74e-11,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.02e-12!102;UBERON:0000924!6.02e-12!102;UBERON:0006601!6.02e-12!102;UBERON:0002346!9.82e-12!71;UBERON:0003075!9.82e-12!71;UBERON:0007284!9.82e-12!71;UBERON:0000033!2.97e-10!63;UBERON:0003056!4.35e-09!49;UBERON:0000020!4.24e-08!12;UBERON:0001032!4.24e-08!12;UBERON:0004456!4.24e-08!12;UBERON:0000073!6.18e-08!75;UBERON:0001016!6.18e-08!75;UBERON:0000970!1.15e-07!9;UBERON:0000019!1.15e-07!9;UBERON:0000047!1.15e-07!9;UBERON:0004088!1.15e-07!9;UBERON:0002104!1.15e-07!9;UBERON:0001456!1.15e-07!9;UBERON:0003072!1.15e-07!9;UBERON:0003071!1.15e-07!9;UBERON:0004128!1.15e-07!9;UBERON:0005085!3.75e-07!13;UBERON:0001049!4.06e-07!52;UBERON:0005068!4.06e-07!52;UBERON:0006241!4.06e-07!52;UBERON:0007135!4.06e-07!52;UBERON:0001017!7.05e-07!73;UBERON:0005743!7.05e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0000020,7.30e-08,12;UBERON:0001032,7.30e-08,12;UBERON:0004456,7.30e-08,12;UBERON:0000033,2.66e-07,13;UBERON:0005085,2.66e-07,13|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0.233612640595526,1.16210991097419,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.799962113967033,0.68822784320151,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.58328969722285,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,0.285650984403804,0,0.61245399607477,0.383381884072945,0,0,0.127687338085188,0,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.854230084794618,0.372798891650601,2.87759534666099,3.47629176491213,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,0.502617408451458,0,0,0.41557608911912,0.324482526135515,0.203678727700633,0,0.252722758433675,0.841767423545896,0.520481771850815,0.459804208866946,0.360124259610698,0.30140963567143,1.15662048557257,1.15302348256365,0.655912071918102,0.517406741478031,0,0.189106080167819,0.527853372491847,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0,0.387904974335251,0.140271639780637,0.379419222745544,1.18088118383682,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0,1.28528526568723,0.141940085208269,0,0.488660878060728,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0.177340233642274,0.178368817602071,0,0,0,0.42366414172764,0.220528398054962,0.16488625294148,0,0.301564624640779,0.358117032009409,0.164140899745061,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.337912250981556,0.469428954583016,0.2604087696879,0.104859344425711,0.483168241652012,0,0,0,0,0,0.179026695667481,0,0.240390899039938,0,0,0,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.36630324853453,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0,0,0,0.385813221962283,0.249810577937946,0.467863216890817,0.429742108096597,0,0.882365676478062,0.231867835620421|short_description=p16@Itgb8}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:320910
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q0VBD0
|association_with_transcript=116bp_to_NM_177290,uc007pik.1,uc007pil.1,uc007pim.1,uc011yvv.1_5end
|cluster_id=chr12:120476623..120476632,-
|description=CAGE_peak_16_at_Itgb8_5end
|id=chr12:120476623..120476632,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000217,4.07e-21,2;CL:0000328,4.07e-21,2;CL:0002573,4.07e-21,2;CL:0002376,4.07e-21,2;CL:0000218,4.07e-21,2;CL:0000692,4.07e-21,2;CL:0002377,4.07e-21,2;CL:0002375,4.07e-21,2;CL:0000215,1.99e-14,3;CL:0000710,3.65e-11,1;CL:0002077,3.65e-11,1;CL:0005014,3.65e-11,1;CL:0002315,3.65e-11,1;CL:0002490,3.65e-11,1;CL:0000815,5.74e-11,1;CL:0000792,5.74e-11,1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!6.02e-12!102;UBERON:0000924!6.02e-12!102;UBERON:0006601!6.02e-12!102;UBERON:0002346!9.82e-12!71;UBERON:0003075!9.82e-12!71;UBERON:0007284!9.82e-12!71;UBERON:0000033!2.97e-10!63;UBERON:0003056!4.35e-09!49;UBERON:0000020!4.24e-08!12;UBERON:0001032!4.24e-08!12;UBERON:0004456!4.24e-08!12;UBERON:0000073!6.18e-08!75;UBERON:0001016!6.18e-08!75;UBERON:0000970!1.15e-07!9;UBERON:0000019!1.15e-07!9;UBERON:0000047!1.15e-07!9;UBERON:0004088!1.15e-07!9;UBERON:0002104!1.15e-07!9;UBERON:0001456!1.15e-07!9;UBERON:0003072!1.15e-07!9;UBERON:0003071!1.15e-07!9;UBERON:0004128!1.15e-07!9;UBERON:0005085!3.75e-07!13;UBERON:0001049!4.06e-07!52;UBERON:0005068!4.06e-07!52;UBERON:0006241!4.06e-07!52;UBERON:0007135!4.06e-07!52;UBERON:0001017!7.05e-07!73;UBERON:0005743!7.05e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0000020,7.30e-08,12;UBERON:0001032,7.30e-08,12;UBERON:0004456,7.30e-08,12;UBERON:0000033,2.66e-07,13;UBERON:0005085,2.66e-07,13
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0.233612640595526,1.16210991097419,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.799962113967033,0.68822784320151,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.58328969722285,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,0.285650984403804,0,0.61245399607477,0.383381884072945,0,0,0.127687338085188,0,0.395658863190582,0.365950574409639,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.854230084794618,0.372798891650601,2.87759534666099,3.47629176491213,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.898743836428936,0.457500602818626,0.502617408451458,0,0,0.41557608911912,0.324482526135515,0.203678727700633,0,0.252722758433675,0.841767423545896,0.520481771850815,0.459804208866946,0.360124259610698,0.30140963567143,1.15662048557257,1.15302348256365,0.655912071918102,0.517406741478031,0,0.189106080167819,0.527853372491847,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,1.1270773567308,0,0.387904974335251,0.140271639780637,0.379419222745544,1.18088118383682,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0,1.28528526568723,0.141940085208269,0,0.488660878060728,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0.177340233642274,0.178368817602071,0,0,0,0.42366414172764,0.220528398054962,0.16488625294148,0,0.301564624640779,0.358117032009409,0.164140899745061,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.337912250981556,0.469428954583016,0.2604087696879,0.104859344425711,0.483168241652012,0,0,0,0,0,0.179026695667481,0,0.240390899039938,0,0,0,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.36630324853453,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0,0,0,0.385813221962283,0.249810577937946,0.467863216890817,0.429742108096597,0,0.882365676478062,0.231867835620421
|short_description=p16@Itgb8
}}

Revision as of 20:54, 4 August 2015

Short description:p16@Itgb8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_16_at_Itgb8_5end
Coexpression cluster:NA
Association with transcript: 116bp_to_NM_177290, uc007pik.1, uc007pil.1, uc007pim.1, uc011yvv.1_5end
EntrezGene:320910
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:120476623..120476632,-&oldid=3821037"