FFCP PHASE1:Mm9::chr9:3005917..3005928,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=80|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:3005917..3005928,+|id=chr9:3005917..3005928,+|ontology_enrichment_celltype=CL:0000553!1.20e-08!6;CL:0000556!1.20e-08!6|ontology_enrichment_celltype_v019_2=CL:0002027,3.98e-23,3;CL:0002006,3.98e-23,3;CL:0002024,3.98e-23,3;CL:0000553,5.29e-20,6;CL:0000556,5.29e-20,6;CL:0000050,1.86e-13,9;CL:0000839,2.10e-09,13;CL:0000763,1.10e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.66e-08,22;UBERON:0004765,1.66e-08,22;UBERON:0001434,1.66e-08,22;UBERON:0001044,2.06e-08,1;UBERON:0001736,2.06e-08,1;UBERON:0003293,2.06e-08,1;UBERON:0003294,2.06e-08,1;UBERON:0001829,2.06e-08,1;UBERON:0010047,2.06e-08,1;UBERON:0000167,2.06e-08,1;UBERON:0006298,2.06e-08,1;UBERON:0002204,4.39e-08,32;UBERON:0002371,1.10e-07,16|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0.34243593645101,0.478632953972018,0,0,2.99798785634096,5.66930748691513,1.39912375625629,0.946386496074713,1.23402990245165,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.377690453926732,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,1.14613375975503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0.869593466105033,0,0,0,0,0,0,0.340860645156116,0.519572009205738,1.41335829804136,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.323533699894818,0.441683036920787,16.9706338597328,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0,0,0,0.130120442962704,0,0,0.452114453507145,0.272145996605311,0,0.468508622798644,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0.697601834251224,0,1.75148013550754,0,0.656669856316381,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0.210407459670956,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0.627264888043406,0.436725127492355,0.134864346384821,0,0,0,1.24267862617385,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0.179427713218951,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,1.54667864109319,0,0,1.35004500046361,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.382576664137687,0.220591419119515,0|short_description=p@chr9:3005917..3005928,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=80 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:3005917..3005928,+ | |||
|description=CAGE_peak_at_chr9:3005917..3005928,+ | |||
|id=chr9:3005917..3005928,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.20e-08!6;CL:0000556!1.20e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,3.98e-23,3;CL:0002006,3.98e-23,3;CL:0002024,3.98e-23,3;CL:0000553,5.29e-20,6;CL:0000556,5.29e-20,6;CL:0000050,1.86e-13,9;CL:0000839,2.10e-09,13;CL:0000763,1.10e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.66e-08,22;UBERON:0004765,1.66e-08,22;UBERON:0001434,1.66e-08,22;UBERON:0001044,2.06e-08,1;UBERON:0001736,2.06e-08,1;UBERON:0003293,2.06e-08,1;UBERON:0003294,2.06e-08,1;UBERON:0001829,2.06e-08,1;UBERON:0010047,2.06e-08,1;UBERON:0000167,2.06e-08,1;UBERON:0006298,2.06e-08,1;UBERON:0002204,4.39e-08,32;UBERON:0002371,1.10e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0.34243593645101,0.478632953972018,0,0,2.99798785634096,5.66930748691513,1.39912375625629,0.946386496074713,1.23402990245165,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.377690453926732,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,1.14613375975503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0.869593466105033,0,0,0,0,0,0,0.340860645156116,0.519572009205738,1.41335829804136,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.323533699894818,0.441683036920787,16.9706338597328,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0,0,0,0.130120442962704,0,0,0.452114453507145,0.272145996605311,0,0.468508622798644,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0.697601834251224,0,1.75148013550754,0,0.656669856316381,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0.210407459670956,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0.627264888043406,0.436725127492355,0.134864346384821,0,0,0,1.24267862617385,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0.179427713218951,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0.572895513439397,1.54667864109319,0,0,1.35004500046361,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr9:3005917..3005928,+ | |||
}} |
Latest revision as of 23:37, 4 August 2015
Short description: | p@chr9:3005917..3005928, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:3005917..3005928, + |
Coexpression cluster: | MCL_coexpression_mm9:80 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 3.98e-23 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.98e-23 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.98e-23 | 3 |
megakaryocyte progenitor cell | 5.29e-20 | 6 |
megakaryocyte | 5.29e-20 | 6 |
megakaryocyte-erythroid progenitor cell | 1.86e-13 | 9 |
myeloid lineage restricted progenitor cell | 2.10e-09 | 13 |
myeloid cell | 1.10e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.66e-08 | 22 |
skeletal element | 1.66e-08 | 22 |
skeletal system | 1.66e-08 | 22 |
saliva-secreting gland | 2.06e-08 | 1 |
submandibular gland | 2.06e-08 | 1 |
gland of oral region | 2.06e-08 | 1 |
gland of foregut | 2.06e-08 | 1 |
major salivary gland | 2.06e-08 | 1 |
oral gland | 2.06e-08 | 1 |
oral cavity | 2.06e-08 | 1 |
submandibular gland primordium | 2.06e-08 | 1 |
musculoskeletal system | 4.39e-08 | 32 |
bone marrow | 1.10e-07 | 16 |