Personal tools

FFCP PHASE1:Mm9::chr18:10182093..10182105,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=19877|HGNC=|MCL_coexpression_id=2229|UniProt=P70335,Q3UE22|association_with_transcript=-303bp_to_ENSMUST00000067947,NM_009071,uc008eaq.1,uc008ear.1_5end|description=CAGE_peak_7_at_Rock1_5end|id=chr18:10182093..10182105,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.43e-09!130;UBERON:0000925!2.43e-09!130;UBERON:0006595!2.43e-09!130;UBERON:0001007!4.46e-09!128;UBERON:0001555!4.46e-09!128;UBERON:0007026!4.46e-09!128;UBERON:0004921!5.32e-09!126;UBERON:0004185!5.32e-09!126;UBERON:0000926!7.86e-07!193;UBERON:0004120!7.86e-07!193;UBERON:0006603!7.86e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.68e-09,118;UBERON:0000925,2.68e-09,118;UBERON:0006595,2.68e-09,118;UBERON:0001007,4.89e-09,116;UBERON:0001555,4.89e-09,116;UBERON:0007026,4.89e-09,116;UBERON:0004921,5.71e-09,114;UBERON:0005409,2.68e-07,47|phase1_expression=1.76163731815273,4.18770489167233,7.27998783023258,3.0246421130683,4.50806156951712,4.19698179779725,3.73780224952841,2.84071311571468,4.36445038670167,5.38348410540585,1.88339765048055,1.67521533890206,3.25281386869291,4.02133851127388,2.99798785634096,3.23960427823721,4.19737126876888,1.57731082679119,2.05671650408608,2.97072756258621,1.27564935226605,0.893618560807968,0.783599367416806,1.11994695955385,2.52350209173887,3.44539178469012,2.58457197695445,1.29282739611533,2.47030445293286,3.78045194639896,2.21730510655305,0,0,0,1.1554064790051,0.498703936075477,1.42918549383658,6.69650609179052,3.1253413780952,2.61761871986899,4.70585190424811,8.19654581950135,5.82612423637384,1.76255545165808,1.01376931219515,0.734187008646726,1.56478268869608,0.436050312760893,0.219686182734472,0.194429899074283,0.279972843250725,0,1.8456086666351,6.5282592781021,2.35265659399725,0.771778308107841,2.29226751951005,4.64104883049698,0.202316460859598,0.528990979272033,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,1.19840044207362,0.384218305321555,0,0.405017814995072,0.630974884054146,0.285650984403804,0,0.489963196859816,0.191690942036473,0,0,0.638436690425939,0.921639199537461,0.263772575460388,0.274462930807229,1.04182674111352,0.279182999001381,0.56276261003168,0.763991238884051,1.47314292736834,0.996601765593721,0.745597783301202,1.4387976733305,1.36028808192214,3.47837386442013,1.72084775396277,0.679971333707751,2.15881276655127,1.94932925234301,0.896053774194671,1.96622188184453,0.852151612890289,1.03914401841148,1.06001872353102,1.54927761754349,1.28326477414318,0,0,1.94841936910093,1.26679932737549,1.01104889002957,1.02765491747154,2.33044095282455,2.07818994690755,1.21439728736295,2.13125834818499,1.15307748628029,0.904335843315735,1.64624189989987,1.25666591329675,1.23597483867187,5.49477556295664,3.5384422077995,2.75003644910596,2.20841518460394,3.39412677194655,0,1.17112318804619,0.83778682725382,3.0654846625031,1.43778149407104,1.19980546198682,0.508280908292259,0.748953197024114,0.915001205637253,0.376963056338593,0.347648640384553,0.511430914660661,0.41557608911912,0.811206315338788,1.73126918545538,2.61254638281195,1.0108910337347,1.05220927943237,1.43132487258974,0.689706313300419,1.26043490863744,1.9591626318643,1.56483948048054,1.40925092313335,1.12442069471675,2.06962696591213,0.646703978798527,3.02569728268511,1.23165786914764,1.09597866213787,1.11218899690239,0.348252166522167,1.02891068203972,0.995171334092466,0,0.51469581422943,0.852490498186778,1.86413195281952,0.938104239924385,2.16074473753218,1.89395788468168,2.36117078096885,2.77680803197281,2.32533944750408,2.41446061259657,3.61972561338225,2.46839774870221,2.95501435342371,2.91847714365081,2.77779976108131,3.73235195994786,2.95254121272818,1.05144974282064,0.823236899034275,3.30418782983798,3.17340679996253,1.2797295032114,1.16118335930219,1.9330119198314,1.21010114774006,1.33426826306922,0.951128130562796,2.84717436926707,1.97638745668813,2.26201687920243,2.78539060857611,1.9496408711912,4.49409704327111,4.53889904736858,1.59313018603494,1.13800740571849,1.25673363870702,0,1.22190796707189,1.16371492300575,1.19230893813542,2.21327879934901,2.95220295959204,1.09899109488962,1.97435462274881,0.889357881261447,2.33583148002532,1.96558995113203,2.69834534861824,4.26006254915856,1.20588579876208,1.52775511068852,2.01387296215567,0.972811360650212,0.823684239564244,1.43768206527355,2.60498663367952,1.5601883655728,1.51547326768267,1.97337154874103,0.964887042726734,4.98833613449833,0.947457058852424,3.58522948172457,1.18821560042632,2.81628297946203,3.51763140627813,2.14239276797412,4.09780660501378,4.72905432318573,3.10050565508285,5.10255259703959,3.11340297959902,3.28101465545202,3.7608755231193,0,1.63171705145613,2.95058563811422,1.93155722413313,1.12385412991454,0.937693492737625,0.983609672260053,1.51482556322624,1.57754109708128,0.390438744296638,1.29254038639679,0.716906393857656,1.55959071857676,2.26461224631066,2.02405350837447,2.04579100537918,1.18586333383957,3.21321316421807,1.98716119291576,1.6025904330053,2.28041743095006,2.14461159864296,1.32745138339963,0.485561272309963,0.604647113929502,1.69744571780308,1.47650946440386,1.84461088766356,2.06742634534577,2.18120237686503,1.42598951353889,1.58018378967908,2.10837217149998,1.03135543248187,1.36175842301515,1.08036656418786,0.258717367565509,1.92903331528433,1.41872186913819,1.42695054081656,1.64549020602121,0.913394847343798,2.3467170806371,1.69465656691056,3.96951116498931,2.96795255294664,2.09903754704677,2.41251699712623,2.02932984805332,2.1338316966858,3.20628920292836,0.741701208042039,3.07567585436135,0.82554747185289,1.66675074632741,5.65105371014073,4.10082683163076,4.80434163733698,1.69978429993855,0.69975726161829,1.79659965945751,2.86401185404534,0.632671987162271,1.82987520414164,2.48412283890143,1.25452977608681,1.74690050996942,3.2367443132357,2.56225712748541,2.6175594198403,3.36998930558661,1.86401793926078,0,1.34564891439581,1.32366792365678,0.972255941720238,0.904118764344118,2.53434188236167,0.938857909166032,1.95306577265925,1.78260885523708,0.241584120826006,1.44015003128933,2.8441000856536,0.810900861160657,0.616265742988964,1.55904987573354,1.07416017400489,0.79472541912506,2.16351809135944,0.886137163047463,0.706765149637033,1.82896335972,1.71404514732629,2.24153125701431,1.05833025804362,1.05189211963412,1.58711268530648,0.221985953374065,1.07656627931371,0.503653849092235,1.15913756419314,2.43987218086537,1.83151624267265,2.35805216986972,1.00314420807073,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0,3.0215755895588,0.675022500231806,0,0,0.51776031175182,1.24544817101012,2.39414924040619,1.19513524027894,1.21553358534147,1.25767897576789,1.65459157605013,1.55572709461131,1.23621034343337,1.60459604795908,3.03236654116557,1.52087579934144,1.69763707247469,1.03005658216871,2.17685518176556,1.95280594449085,0.952587382566147,2.66533949673168,1.73618298417335,0.412085900803307,0.588795680537589,1.71434626192708,0.532427418478012,1.1921809497366,1.88950341622027,1.2234219453993,0.930760686808441,1.28049581010941,0.789209134313529,0.679020569229309,0.561142271657738,2.25406534435931,1.57607171800902,1.22769312950907,1.54936841185966,2.12197272079256,0.749431733813838,1.63752125911786,2.14871054048298,1.53030665655075,3.30887128679273,0.695603506861264|short_description=p7@Rock1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:19877
|HGNC=
|MCL_coexpression_id=2229
|TSSclassifier=NA
|UniProt=uniprot:P70335,uniprot:Q3UE22
|association_with_transcript=-303bp_to_ENSMUST00000067947,NM_009071,uc008eaq.1,uc008ear.1_5end
|cluster_id=chr18:10182093..10182105,-
|description=CAGE_peak_7_at_Rock1_5end
|id=chr18:10182093..10182105,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.43e-09!130;UBERON:0000925!2.43e-09!130;UBERON:0006595!2.43e-09!130;UBERON:0001007!4.46e-09!128;UBERON:0001555!4.46e-09!128;UBERON:0007026!4.46e-09!128;UBERON:0004921!5.32e-09!126;UBERON:0004185!5.32e-09!126;UBERON:0000926!7.86e-07!193;UBERON:0004120!7.86e-07!193;UBERON:0006603!7.86e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.68e-09,118;UBERON:0000925,2.68e-09,118;UBERON:0006595,2.68e-09,118;UBERON:0001007,4.89e-09,116;UBERON:0001555,4.89e-09,116;UBERON:0007026,4.89e-09,116;UBERON:0004921,5.71e-09,114;UBERON:0005409,2.68e-07,47
|phase1_expression=1.76163731815273,4.18770489167233,7.27998783023258,3.0246421130683,4.50806156951712,4.19698179779725,3.73780224952841,2.84071311571468,4.36445038670167,5.38348410540585,1.88339765048055,1.67521533890206,3.25281386869291,4.02133851127388,2.99798785634096,3.23960427823721,4.19737126876888,1.57731082679119,2.05671650408608,2.97072756258621,1.27564935226605,0.893618560807968,0.783599367416806,1.11994695955385,2.52350209173887,3.44539178469012,2.58457197695445,1.29282739611533,2.47030445293286,3.78045194639896,2.21730510655305,0,0,0,1.1554064790051,0.498703936075477,1.42918549383658,6.69650609179052,3.1253413780952,2.61761871986899,4.70585190424811,8.19654581950135,5.82612423637384,1.76255545165808,1.01376931219515,0.734187008646726,1.56478268869608,0.436050312760893,0.219686182734472,0.194429899074283,0.279972843250725,0,1.8456086666351,6.5282592781021,2.35265659399725,0.771778308107841,2.29226751951005,4.64104883049698,0.202316460859598,0.528990979272033,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0.7104801149461,1.19840044207362,0.384218305321555,0,0.405017814995072,0.630974884054146,0.285650984403804,0,0.489963196859816,0.191690942036473,0,0,0.638436690425939,0.921639199537461,0.263772575460388,0.274462930807229,1.04182674111352,0.279182999001381,0.56276261003168,0.763991238884051,1.47314292736834,0.996601765593721,0.745597783301202,1.4387976733305,1.36028808192214,3.47837386442013,1.72084775396277,0.679971333707751,2.15881276655127,1.94932925234301,0.896053774194671,1.96622188184453,0.852151612890289,1.03914401841148,1.06001872353102,1.54927761754349,1.28326477414318,0,0,1.94841936910093,1.26679932737549,1.01104889002957,1.02765491747154,2.33044095282455,2.07818994690755,1.21439728736295,2.13125834818499,1.15307748628029,0.904335843315735,1.64624189989987,1.25666591329675,1.23597483867187,5.49477556295664,3.5384422077995,2.75003644910596,2.20841518460394,3.39412677194655,0,1.17112318804619,0.83778682725382,3.0654846625031,1.43778149407104,1.19980546198682,0.508280908292259,0.748953197024114,0.915001205637253,0.376963056338593,0.347648640384553,0.511430914660661,0.41557608911912,0.811206315338788,1.73126918545538,2.61254638281195,1.0108910337347,1.05220927943237,1.43132487258974,0.689706313300419,1.26043490863744,1.9591626318643,1.56483948048054,1.40925092313335,1.12442069471675,2.06962696591213,0.646703978798527,3.02569728268511,1.23165786914764,1.09597866213787,1.11218899690239,0.348252166522167,1.02891068203972,0.995171334092466,0,0.51469581422943,0.852490498186778,1.86413195281952,0.938104239924385,2.16074473753218,1.89395788468168,2.36117078096885,2.77680803197281,2.32533944750408,2.41446061259657,3.61972561338225,2.46839774870221,2.95501435342371,2.91847714365081,2.77779976108131,3.73235195994786,2.95254121272818,1.05144974282064,0.823236899034275,3.30418782983798,3.17340679996253,1.2797295032114,1.16118335930219,1.9330119198314,1.21010114774006,1.33426826306922,0.951128130562796,2.84717436926707,1.97638745668813,2.26201687920243,2.78539060857611,1.9496408711912,4.49409704327111,4.53889904736858,1.59313018603494,1.13800740571849,1.25673363870702,0,1.22190796707189,1.16371492300575,1.19230893813542,2.21327879934901,2.95220295959204,1.09899109488962,1.97435462274881,0.889357881261447,2.33583148002532,1.96558995113203,2.69834534861824,4.26006254915856,1.20588579876208,1.52775511068852,2.01387296215567,0.972811360650212,0.823684239564244,1.43768206527355,2.60498663367952,1.5601883655728,1.51547326768267,1.97337154874103,0.964887042726734,4.98833613449833,0.947457058852424,3.58522948172457,1.18821560042632,2.81628297946203,3.51763140627813,2.14239276797412,4.09780660501378,4.72905432318573,3.10050565508285,5.10255259703959,3.11340297959902,3.28101465545202,3.7608755231193,0,1.63171705145613,2.95058563811422,1.93155722413313,1.12385412991454,0.937693492737625,0.983609672260053,1.51482556322624,1.57754109708128,0.390438744296638,1.29254038639679,0.716906393857656,1.55959071857676,2.26461224631066,2.02405350837447,2.04579100537918,1.18586333383957,3.21321316421807,1.98716119291576,1.6025904330053,2.28041743095006,2.14461159864296,1.32745138339963,0.485561272309963,0.604647113929502,1.69744571780308,1.47650946440386,1.84461088766356,2.06742634534577,2.18120237686503,1.42598951353889,1.58018378967908,2.10837217149998,1.03135543248187,1.36175842301515,1.08036656418786,0.258717367565509,1.92903331528433,1.41872186913819,1.42695054081656,1.64549020602121,0.913394847343798,2.3467170806371,1.69465656691056,3.96951116498931,2.96795255294664,2.09903754704677,2.41251699712623,2.02932984805332,2.1338316966858,3.20628920292836,0.741701208042039,3.07567585436135,0.82554747185289,1.66675074632741,5.65105371014073,4.10082683163076,4.80434163733698,1.69978429993855,0.69975726161829,1.79659965945751,2.86401185404534,0.632671987162271,1.82987520414164,2.48412283890143,1.25452977608681,1.74690050996942,3.2367443132357,2.56225712748541,2.6175594198403,3.36998930558661,1.86401793926078,0,1.34564891439581,1.32366792365678,0.972255941720238,0.904118764344118,2.53434188236167,0.938857909166032,1.95306577265925,1.78260885523708,0.241584120826006,1.44015003128933,2.8441000856536,0.810900861160657,0.616265742988964,1.55904987573354,1.07416017400489,0.79472541912506,2.16351809135944,0.886137163047463,0.706765149637033,1.82896335972,1.71404514732629,2.24153125701431,1.05833025804362,1.05189211963412,1.58711268530648,0.221985953374065,1.07656627931371,0.503653849092235,1.15913756419314,2.43987218086537,1.83151624267265,2.35805216986972,1.00314420807073,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0,3.0215755895588,0.675022500231806,0,0,0.51776031175182,1.24544817101012,2.39414924040619,1.19513524027894,1.21553358534147,1.25767897576789,1.65459157605013,1.55572709461131,1.23621034343337,1.60459604795908,3.03236654116557,1.52087579934144,1.69763707247469,1.03005658216871,2.17685518176556,1.95280594449085,0.952587382566147,2.66533949673168,1.73618298417335,0.412085900803307,0.588795680537589,1.71434626192708,0.532427418478012,1.1921809497366,1.88950341622027,1.2234219453993,0.930760686808441,1.28049581010941,0.789209134313529,0.679020569229309,0.561142271657738,2.25406534435931,1.57607171800902,1.22769312950907,1.54936841185966,2.12197272079256,0.749431733813838,1.63752125911786,2.14871054048298,1.53030665655075,3.30887128679273,0.695603506861264
|short_description=p7@Rock1
}}

Revision as of 12:28, 5 August 2015

Short description:p7@Rock1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Rock1_5end
Coexpression cluster:MCL_coexpression_mm9:2229
Association with transcript: -303bp_to_ENSMUST00000067947, NM_009071, uc008eaq.1, uc008ear.1_5end
EntrezGene:19877
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Rock1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.02
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H15.49
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G12.92
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H32.41
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B83.24
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.68e-09118
endoderm2.68e-09118
presumptive endoderm2.68e-09118
digestive system4.89e-09116
digestive tract4.89e-09116
primitive gut4.89e-09116
subdivision of digestive tract5.71e-09114
gastrointestinal system2.68e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:10182093..10182105,-&oldid=3899284"