FFCP PHASE1:Mm9::chr18:20841502..20841507,-: Difference between revisions
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{{FFCP|EntrezGene=100040823|HGNC=|MCL_coexpression_id=81|UniProt=G3UWD7|association_with_transcript=0bp_to_ENSMUST00000165229_5end|description=CAGE_peak_1_at_Gm10269_5end|id=chr18:20841502..20841507,-|ontology_enrichment_celltype=CL:0000144!3.19e-30!121;CL:0000012!3.19e-30!121;CL:0002371!3.16e-28!118;CL:0000548!6.08e-28!115;CL:0000004!6.08e-28!115;CL:0000255!6.08e-28!115;CL:0000063!1.00e-21!66;CL:0000034!2.58e-21!97;CL:0000219!3.46e-18!54;CL:0000723!4.03e-18!91;CL:0000048!4.03e-18!91;CL:0002320!2.05e-15!46;CL:0000134!2.05e-15!46;CL:0000988!3.33e-14!32;CL:0002032!3.33e-14!32;CL:0000037!3.33e-14!32;CL:0000566!3.33e-14!32;CL:0000837!3.33e-14!32;CL:0002031!3.32e-12!25;CL:0000738!3.45e-09!17;CL:0002087!3.45e-09!17;CL:0002321!4.34e-09!70;CL:0000220!4.34e-09!70;CL:0000838!2.28e-08!12;CL:0000049!5.85e-08!19;CL:0000084!9.83e-08!11;CL:0000827!9.83e-08!11;CL:0000542!1.68e-07!13;CL:0000051!1.68e-07!13;CL:0000791!3.99e-07!9;CL:0000789!3.99e-07!9;CL:0002420!3.99e-07!9;CL:0002419!3.99e-07!9;CL:0000790!3.99e-07!9|ontology_enrichment_celltype_v019_2=CL:0000034,2.56e-21,97;CL:0000219,3.44e-18,54;CL:0000723,4.01e-18,91;CL:0000048,4.01e-18,91;CL:0002320,2.04e-15,46;CL:0000134,2.04e-15,46;CL:0000988,3.31e-14,32;CL:0002032,3.31e-14,32;CL:0000037,3.31e-14,32;CL:0000837,3.31e-14,32;CL:0002031,3.30e-12,25;CL:0000738,3.45e-09,17;CL:0002087,3.45e-09,17;CL:0002321,4.34e-09,70;CL:0000838,2.28e-08,12;CL:0000049,5.81e-08,19;CL:0000084,9.83e-08,11;CL:0000827,9.83e-08,11;CL:0000542,1.68e-07,13;CL:0000051,1.68e-07,13;CL:0000791,3.99e-07,9;CL:0000789,3.99e-07,9;CL:0002420,3.99e-07,9;CL:0002419,3.99e-07,9;CL:0000790,3.99e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.05e-15!46;UBERON:0002193!1.50e-08!48;UBERON:0002390!3.54e-08!45;UBERON:0003061!3.54e-08!45;UBERON:0001474!1.81e-07!22;UBERON:0004765!1.81e-07!22;UBERON:0001434!1.81e-07!22;UBERON:0002371!3.65e-07!16;UBERON:0002204!9.14e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.04e-15,46;UBERON:0002193,1.50e-08,48;UBERON:0002405,1.50e-08,48;UBERON:0002390,3.54e-08,45;UBERON:0003061,3.54e-08,45;UBERON:0001474,1.81e-07,22;UBERON:0004765,1.81e-07,22;UBERON:0001434,1.81e-07,22;UBERON:0002371,3.65e-07,16;UBERON:0002204,9.14e-07,32|phase1_expression=26.2644109251862,8.72438519098403,7.27998783023258,5.14189159221611,7.01254021924886,22.4958224361932,37.3780224952841,55.3939057564362,134.171652210538,92.6895524235094,118.654051980275,59.4302584515256,110.938072995421,61.1068612908792,22.9845735652807,58.5153522756597,72.7544353253273,101.105623997315,96.1172179576229,98.458399217143,5.18764069921526,11.7163322417045,101.606717975046,39.0381511615912,43.128944840628,16.0784949952206,35.3224836850441,19.39241094173,31.3538642103017,21.4225610295941,22.1730510655305,12.7006134691926,0.61506478758457,15.8481681015439,44.4831494416963,64.3328077537365,56.1465729721515,12.5559489221072,8.5946887897618,8.37637990358077,1.76469446409304,4.09827290975067,10.1957174136542,10.0717454380462,10.5432008468295,12.114085642671,57.8969594817549,11.5553332881637,16.9158360705543,11.0825042472342,17.4983027031703,21.5628846547457,98.1528245437758,132.741271988076,154.603147605533,5.65970759279083,10.3152038377952,26.814948798427,29.5382032855013,2.64495489636016,11.4089652631112,46.082856361402,47.1326241938904,15.2982951937838,5.93319817540185,34.1030455174128,18.5752068521411,15.7529505181837,21.7748185847803,13.6355997715008,40.8030425021681,10.2834354385369,13.2521124570968,31.1126630005983,25.0156679357597,22.0612508786405,1.10115880999389,5.10749352340751,3.84016333140609,28.3555518619917,17.4741399280602,23.4411016750542,4.74611098302348,3.93933827022176,5.50073691996516,5.59794312399969,10.2507610175354,18.8263440283554,42.6338468465826,37.8613516134995,30.1459068249745,27.5335640634044,13.599426674155,4.85732872474035,6.49776417447669,8.06448396775204,2.66844398250329,5.96506129023202,89.3663855833869,102.115137033488,34.9291681046168,65.4465034813021,40.7688383530633,21.3320010945999,62.3494198112297,57.7660493283225,54.5966400615966,2.16949371466214,5.43769555659061,5.93768556259299,6.07198643681475,7.61163695780353,4.84292544237723,4.82312449768392,10.4653949350777,6.1576629751541,4.6967043869531,3.47038456607788,12.3845477272982,8.08834249737046,7.95029466457417,9.21262980956922,1.86391761218122,1.17112318804619,3.35114730901528,4.59822699375465,60.9858983735134,80.98686868411,73.0653805670122,4.34392854273986,2.28750301409313,11.1832373380449,4.51943232499919,1.79000820131231,2.49345653471472,3.0825839982874,14.0538322113436,11.9430691785689,8.33985102831127,4.62972082950243,4.42409506073193,9.42598628177239,11.7040384373477,4.82255417074288,7.14383241088942,1.66547836370305,6.1843138209421,4.13925393182425,4.74249584452253,9.64441008855878,5.80638709741031,14.4669183402199,6.95118123063995,5.57203466435466,6.1734640922383,5.57295947091781,35.812872552975,87.7556363261179,9.37739548005456,7.87077935634907,4.45599513964083,5.76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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100040823 | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UWD7 | |||
|association_with_transcript=0bp_to_ENSMUST00000165229_5end | |||
|cluster_id=chr18:20841502..20841507,- | |||
|description=CAGE_peak_1_at_Gm10269_5end | |||
|id=chr18:20841502..20841507,- | |||
|ontology_enrichment_celltype=CL:0000144!3.19e-30!121;CL:0000012!3.19e-30!121;CL:0002371!3.16e-28!118;CL:0000548!6.08e-28!115;CL:0000004!6.08e-28!115;CL:0000255!6.08e-28!115;CL:0000063!1.00e-21!66;CL:0000034!2.58e-21!97;CL:0000219!3.46e-18!54;CL:0000723!4.03e-18!91;CL:0000048!4.03e-18!91;CL:0002320!2.05e-15!46;CL:0000134!2.05e-15!46;CL:0000988!3.33e-14!32;CL:0002032!3.33e-14!32;CL:0000037!3.33e-14!32;CL:0000566!3.33e-14!32;CL:0000837!3.33e-14!32;CL:0002031!3.32e-12!25;CL:0000738!3.45e-09!17;CL:0002087!3.45e-09!17;CL:0002321!4.34e-09!70;CL:0000220!4.34e-09!70;CL:0000838!2.28e-08!12;CL:0000049!5.85e-08!19;CL:0000084!9.83e-08!11;CL:0000827!9.83e-08!11;CL:0000542!1.68e-07!13;CL:0000051!1.68e-07!13;CL:0000791!3.99e-07!9;CL:0000789!3.99e-07!9;CL:0002420!3.99e-07!9;CL:0002419!3.99e-07!9;CL:0000790!3.99e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.56e-21,97;CL:0000219,3.44e-18,54;CL:0000723,4.01e-18,91;CL:0000048,4.01e-18,91;CL:0002320,2.04e-15,46;CL:0000134,2.04e-15,46;CL:0000988,3.31e-14,32;CL:0002032,3.31e-14,32;CL:0000037,3.31e-14,32;CL:0000837,3.31e-14,32;CL:0002031,3.30e-12,25;CL:0000738,3.45e-09,17;CL:0002087,3.45e-09,17;CL:0002321,4.34e-09,70;CL:0000838,2.28e-08,12;CL:0000049,5.81e-08,19;CL:0000084,9.83e-08,11;CL:0000827,9.83e-08,11;CL:0000542,1.68e-07,13;CL:0000051,1.68e-07,13;CL:0000791,3.99e-07,9;CL:0000789,3.99e-07,9;CL:0002420,3.99e-07,9;CL:0002419,3.99e-07,9;CL:0000790,3.99e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.05e-15!46;UBERON:0002193!1.50e-08!48;UBERON:0002390!3.54e-08!45;UBERON:0003061!3.54e-08!45;UBERON:0001474!1.81e-07!22;UBERON:0004765!1.81e-07!22;UBERON:0001434!1.81e-07!22;UBERON:0002371!3.65e-07!16;UBERON:0002204!9.14e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.04e-15,46;UBERON:0002193,1.50e-08,48;UBERON:0002405,1.50e-08,48;UBERON:0002390,3.54e-08,45;UBERON:0003061,3.54e-08,45;UBERON:0001474,1.81e-07,22;UBERON:0004765,1.81e-07,22;UBERON:0001434,1.81e-07,22;UBERON:0002371,3.65e-07,16;UBERON:0002204,9.14e-07,32 | |||
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| |||
|short_description=p1@Gm10269 | |||
}} |
Revision as of 13:56, 5 August 2015
Short description: | p1@Gm10269 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm10269_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | 0bp_to_ENSMUST00000165229_5end |
EntrezGene: | 100040823 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.56e-21 | 97 |
motile cell | 3.44e-18 | 54 |
somatic stem cell | 4.01e-18 | 91 |
multi fate stem cell | 4.01e-18 | 91 |
connective tissue cell | 2.04e-15 | 46 |
mesenchymal cell | 2.04e-15 | 46 |
hematopoietic cell | 3.31e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.31e-14 | 32 |
hematopoietic stem cell | 3.31e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.31e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 3.30e-12 | 25 |
leukocyte | 3.45e-09 | 17 |
nongranular leukocyte | 3.45e-09 | 17 |
embryonic cell | 4.34e-09 | 70 |
lymphoid lineage restricted progenitor cell | 2.28e-08 | 12 |
common myeloid progenitor | 5.81e-08 | 19 |
T cell | 9.83e-08 | 11 |
pro-T cell | 9.83e-08 | 11 |
lymphocyte | 1.68e-07 | 13 |
common lymphoid progenitor | 1.68e-07 | 13 |
mature alpha-beta T cell | 3.99e-07 | 9 |
alpha-beta T cell | 3.99e-07 | 9 |
immature T cell | 3.99e-07 | 9 |
mature T cell | 3.99e-07 | 9 |
immature alpha-beta T cell | 3.99e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.04e-15 | 46 |
hemolymphoid system | 1.50e-08 | 48 |
immune system | 1.50e-08 | 48 |
hematopoietic system | 3.54e-08 | 45 |
blood island | 3.54e-08 | 45 |
bone element | 1.81e-07 | 22 |
skeletal element | 1.81e-07 | 22 |
skeletal system | 1.81e-07 | 22 |
bone marrow | 3.65e-07 | 16 |
musculoskeletal system | 9.14e-07 | 32 |