FFCP PHASE1:Mm9::chr3:102310542..102310558,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=41|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:102310542..102310558,+|id=chr3:102310542..102310558,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,4.86e-20,3;CL:0002202,4.86e-20,3;CL:0000069,4.86e-20,3;CL:0002632,4.86e-20,3;CL:0002368,4.86e-20,3;CL:0000307,4.86e-20,3;CL:0000377,4.86e-20,3;CL:0000680,1.07e-10,6;CL:0000187,1.07e-10,6;CL:0000056,1.07e-10,6;CL:0000222,2.61e-09,7;CL:0000355,1.89e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.86e-20,3;UBERON:0001005,4.86e-20,3;UBERON:0007196,4.86e-20,3;UBERON:0001558,4.86e-20,3;UBERON:0001044,3.44e-16,1;UBERON:0001736,3.44e-16,1;UBERON:0003293,3.44e-16,1;UBERON:0003294,3.44e-16,1;UBERON:0001829,3.44e-16,1;UBERON:0010047,3.44e-16,1;UBERON:0000167,3.44e-16,1;UBERON:0006298,3.44e-16,1;UBERON:0000165,9.17e-09,2;UBERON:0000166,9.17e-09,2;UBERON:0000930,9.17e-09,2;UBERON:0001134,1.89e-07,9;UBERON:0002036,1.89e-07,9;UBERON:0002385,1.89e-07,9;UBERON:0000486,1.89e-07,9;UBERON:0007503,1.89e-07,9;UBERON:0001015,1.89e-07,9;UBERON:0002329,1.89e-07,9;UBERON:0003082,1.89e-07,9;UBERON:0003059,1.89e-07,9;UBERON:0007282,1.89e-07,9;UBERON:0004290,1.89e-07,9;UBERON:0009618,1.89e-07,9;UBERON:0000383,8.53e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.506884656097573,0.183546752161682,0.782391344348039,0,0,0,0,0,0,0,0,2.05807548828758,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0,0,0,0,1.29894624606728,0.253359865475099,1.01104889002957,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0,0.2562274405697,0,0,0.215567992932842,0.378212160335639,0.175951124163949,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0.462801338662135,0.232533944750408,0,0,0.329119699826961,1.31333971263276,0.243206428637567,0.438599962275997,0.219550115291051,0.134206418760372,0,0,0,0,0,0.464473343720877,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0.58489226135736,0.898819408654221,0,0,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.885660887877613,0,0.123397163921801,0.889357881261447,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0.624075346229121,0.505157755894224,0,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0,0,0.922305443831782,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0.238744688006273,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0.324016022465404,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,88.8515217714304,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.256100609619477,0.287177344778066,0,0.231768651889711,0,0,0,0,0,0.476872379894642,0.145346416632329,0.376437521661322,0.338458431566706,0.365855945745545,0,0.271608227691724,0.561142271657738,0.830445126869219,0.591026894253381,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0.231867835620421|short_description=p@chr3:102310542..102310558,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=41 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:102310542..102310558,+ | |||
|description=CAGE_peak_at_chr3:102310542..102310558,+ | |||
|id=chr3:102310542..102310558,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.86e-20,3;CL:0002202,4.86e-20,3;CL:0000069,4.86e-20,3;CL:0002632,4.86e-20,3;CL:0002368,4.86e-20,3;CL:0000307,4.86e-20,3;CL:0000377,4.86e-20,3;CL:0000680,1.07e-10,6;CL:0000187,1.07e-10,6;CL:0000056,1.07e-10,6;CL:0000222,2.61e-09,7;CL:0000355,1.89e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,4.86e-20,3;UBERON:0001005,4.86e-20,3;UBERON:0007196,4.86e-20,3;UBERON:0001558,4.86e-20,3;UBERON:0001044,3.44e-16,1;UBERON:0001736,3.44e-16,1;UBERON:0003293,3.44e-16,1;UBERON:0003294,3.44e-16,1;UBERON:0001829,3.44e-16,1;UBERON:0010047,3.44e-16,1;UBERON:0000167,3.44e-16,1;UBERON:0006298,3.44e-16,1;UBERON:0000165,9.17e-09,2;UBERON:0000166,9.17e-09,2;UBERON:0000930,9.17e-09,2;UBERON:0001134,1.89e-07,9;UBERON:0002036,1.89e-07,9;UBERON:0002385,1.89e-07,9;UBERON:0000486,1.89e-07,9;UBERON:0007503,1.89e-07,9;UBERON:0001015,1.89e-07,9;UBERON:0002329,1.89e-07,9;UBERON:0003082,1.89e-07,9;UBERON:0003059,1.89e-07,9;UBERON:0007282,1.89e-07,9;UBERON:0004290,1.89e-07,9;UBERON:0009618,1.89e-07,9;UBERON:0000383,8.53e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.506884656097573,0.183546752161682,0.782391344348039,0,0,0,0,0,0,0,0,2.05807548828758,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0.226714680320357,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0,0,0,0,1.29894624606728,0.253359865475099,1.01104889002957,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0,0.2562274405697,0,0,0.215567992932842,0.378212160335639,0.175951124163949,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0.462801338662135,0.232533944750408,0,0,0.329119699826961,1.31333971263276,0.243206428637567,0.438599962275997,0.219550115291051,0.134206418760372,0,0,0,0,0,0.464473343720877,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0.58489226135736,0.898819408654221,0,0,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.885660887877613,0,0.123397163921801,0.889357881261447,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0.624075346229121,0.505157755894224,0,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0,0,0.922305443831782,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0.238744688006273,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0.324016022465404,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,88.8515217714304,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0.44449345560323,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.256100609619477,0.287177344778066,0,0.231768651889711,0,0,0,0,0,0.476872379894642,0.145346416632329,0.376437521661322,0.338458431566706,0.365855945745545,0,0.271608227691724,0.561142271657738,0.830445126869219,0.591026894253381,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr3:102310542..102310558,+ | |||
}} |
Latest revision as of 18:06, 5 August 2015
Short description: | p@chr3:102310542..102310558, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:102310542..102310558, + |
Coexpression cluster: | MCL_coexpression_mm9:41 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.86e-20 | 3 |
epithelial cell of tracheobronchial tree | 4.86e-20 | 3 |
branched duct epithelial cell | 4.86e-20 | 3 |
epithelial cell of lower respiratory tract | 4.86e-20 | 3 |
respiratory epithelial cell | 4.86e-20 | 3 |
tracheal epithelial cell | 4.86e-20 | 3 |
tracheoblast | 4.86e-20 | 3 |
muscle precursor cell | 1.07e-10 | 6 |
muscle cell | 1.07e-10 | 6 |
myoblast | 1.07e-10 | 6 |
mesodermal cell | 2.61e-09 | 7 |
multi-potent skeletal muscle stem cell | 1.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trachea | 4.86e-20 | 3 |
respiratory airway | 4.86e-20 | 3 |
tracheobronchial tree | 4.86e-20 | 3 |
lower respiratory tract | 4.86e-20 | 3 |
saliva-secreting gland | 3.44e-16 | 1 |
submandibular gland | 3.44e-16 | 1 |
gland of oral region | 3.44e-16 | 1 |
gland of foregut | 3.44e-16 | 1 |
major salivary gland | 3.44e-16 | 1 |
oral gland | 3.44e-16 | 1 |
oral cavity | 3.44e-16 | 1 |
submandibular gland primordium | 3.44e-16 | 1 |
mouth | 9.17e-09 | 2 |
oral opening | 9.17e-09 | 2 |
stomodeum | 9.17e-09 | 2 |
skeletal muscle tissue | 1.89e-07 | 9 |
striated muscle tissue | 1.89e-07 | 9 |
muscle tissue | 1.89e-07 | 9 |
multilaminar epithelium | 1.89e-07 | 9 |
epithelial vesicle | 1.89e-07 | 9 |
musculature | 1.89e-07 | 9 |
somite | 1.89e-07 | 9 |
myotome | 1.89e-07 | 9 |
presomitic mesoderm | 1.89e-07 | 9 |
presumptive segmental plate | 1.89e-07 | 9 |
dermomyotome | 1.89e-07 | 9 |
trunk paraxial mesoderm | 1.89e-07 | 9 |
musculature of body | 8.53e-07 | 10 |