FFCP PHASE1:Mm9::chr15:89307870..89307881,-: Difference between revisions
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{{FFCP|EntrezGene=11883|HGNC=|MCL_coexpression_id=8|UniProt=P50428|association_with_transcript=-14bp_to_ENSMUST00000165199_5end|description=CAGE_peak_7_at_Arsa_5end|id=chr15:89307870..89307881,-|ontology_enrichment_celltype=CL:0000066!1.66e-11!25;CL:0000181!4.81e-10!5;CL:0000417!4.81e-10!5;CL:0000668!4.81e-10!5;CL:0000412!4.81e-10!5;CL:0000182!4.81e-10!5;CL:0000223!4.46e-09!20;CL:0000239!1.33e-07!6;CL:0000677!1.33e-07!6;CL:0000212!1.33e-07!6;CL:0000584!1.33e-07!6|ontology_enrichment_celltype_v019_2=CL:0000182,3.54e-21,5;CL:0000066,2.09e-15,25;CL:0000223,4.90e-15,20;CL:0000239,8.96e-10,6;CL:0000677,8.96e-10,6;CL:0000584,8.96e-10,6;CL:0000075,1.87e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.14e-11!22;UBERON:0007499!1.14e-11!22;UBERON:0006925!1.14e-11!22;UBERON:0009497!1.14e-11!22;UBERON:0000015!1.14e-11!22;UBERON:0002423!1.14e-11!22;UBERON:0006235!1.14e-11!22;UBERON:0008835!1.14e-11!22;UBERON:0003894!1.14e-11!22;UBERON:0004161!1.14e-11!22;UBERON:0008836!1.14e-11!22;UBERON:0009854!5.18e-11!23;UBERON:0009856!5.18e-11!23;UBERON:0000344!3.86e-10!15;UBERON:0002365!7.35e-10!25;UBERON:0002330!7.35e-10!25;UBERON:0001242!1.57e-07!13;UBERON:0000060!1.57e-07!13;UBERON:0001262!1.57e-07!13;UBERON:0004786!1.57e-07!13;UBERON:0001007!1.76e-07!128;UBERON:0001555!1.76e-07!128;UBERON:0007026!1.76e-07!128;UBERON:0003929!2.30e-07!55;UBERON:0000160!2.76e-07!43;UBERON:0004119!3.06e-07!130;UBERON:0000925!3.06e-07!130;UBERON:0006595!3.06e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.60e-14,22;UBERON:0007499,5.60e-14,22;UBERON:0006925,5.60e-14,22;UBERON:0009497,5.60e-14,22;UBERON:0000015,5.60e-14,22;UBERON:0002423,5.60e-14,22;UBERON:0006235,5.60e-14,22;UBERON:0008835,5.60e-14,22;UBERON:0003894,5.60e-14,22;UBERON:0004161,5.60e-14,22;UBERON:0008836,5.60e-14,22;UBERON:0009854,2.40e-13,23;UBERON:0009856,2.40e-13,23;UBERON:0002365,3.10e-12,25;UBERON:0002330,3.10e-12,25;UBERON:0003929,1.54e-10,55;UBERON:0000490,1.38e-08,66;UBERON:0005911,3.66e-08,69;UBERON:0001242,6.91e-08,13;UBERON:0001262,6.91e-08,13;UBERON:0004786,6.91e-08,13;UBERON:0000344,7.35e-07,15|phase1_expression=0,2.09385244583617,0.909998478779072,1.20985684522732,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.91763712426868,0.57423196411502,0.86152399231815,1.07735616342945,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,2.03991400112325,4.31762553310254,5.19821133958135,7.6164570806547,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,0.528901133327089,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,2.07516838961004,0,0.196558995113203,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0.505157755894224,4.66433275156972,4.82443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p7@Arsa}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11883 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P50428 | |||
|association_with_transcript=-14bp_to_ENSMUST00000165199_5end | |||
|cluster_id=chr15:89307870..89307881,- | |||
|description=CAGE_peak_7_at_Arsa_5end | |||
|id=chr15:89307870..89307881,- | |||
|ontology_enrichment_celltype=CL:0000066!1.66e-11!25;CL:0000181!4.81e-10!5;CL:0000417!4.81e-10!5;CL:0000668!4.81e-10!5;CL:0000412!4.81e-10!5;CL:0000182!4.81e-10!5;CL:0000223!4.46e-09!20;CL:0000239!1.33e-07!6;CL:0000677!1.33e-07!6;CL:0000212!1.33e-07!6;CL:0000584!1.33e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.54e-21,5;CL:0000066,2.09e-15,25;CL:0000223,4.90e-15,20;CL:0000239,8.96e-10,6;CL:0000677,8.96e-10,6;CL:0000584,8.96e-10,6;CL:0000075,1.87e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.14e-11!22;UBERON:0007499!1.14e-11!22;UBERON:0006925!1.14e-11!22;UBERON:0009497!1.14e-11!22;UBERON:0000015!1.14e-11!22;UBERON:0002423!1.14e-11!22;UBERON:0006235!1.14e-11!22;UBERON:0008835!1.14e-11!22;UBERON:0003894!1.14e-11!22;UBERON:0004161!1.14e-11!22;UBERON:0008836!1.14e-11!22;UBERON:0009854!5.18e-11!23;UBERON:0009856!5.18e-11!23;UBERON:0000344!3.86e-10!15;UBERON:0002365!7.35e-10!25;UBERON:0002330!7.35e-10!25;UBERON:0001242!1.57e-07!13;UBERON:0000060!1.57e-07!13;UBERON:0001262!1.57e-07!13;UBERON:0004786!1.57e-07!13;UBERON:0001007!1.76e-07!128;UBERON:0001555!1.76e-07!128;UBERON:0007026!1.76e-07!128;UBERON:0003929!2.30e-07!55;UBERON:0000160!2.76e-07!43;UBERON:0004119!3.06e-07!130;UBERON:0000925!3.06e-07!130;UBERON:0006595!3.06e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.60e-14,22;UBERON:0007499,5.60e-14,22;UBERON:0006925,5.60e-14,22;UBERON:0009497,5.60e-14,22;UBERON:0000015,5.60e-14,22;UBERON:0002423,5.60e-14,22;UBERON:0006235,5.60e-14,22;UBERON:0008835,5.60e-14,22;UBERON:0003894,5.60e-14,22;UBERON:0004161,5.60e-14,22;UBERON:0008836,5.60e-14,22;UBERON:0009854,2.40e-13,23;UBERON:0009856,2.40e-13,23;UBERON:0002365,3.10e-12,25;UBERON:0002330,3.10e-12,25;UBERON:0003929,1.54e-10,55;UBERON:0000490,1.38e-08,66;UBERON:0005911,3.66e-08,69;UBERON:0001242,6.91e-08,13;UBERON:0001262,6.91e-08,13;UBERON:0004786,6.91e-08,13;UBERON:0000344,7.35e-07,15 | |||
|phase1_expression=0,2.09385244583617,0.909998478779072,1.20985684522732,1.00179145989269,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.91763712426868,0.57423196411502,0.86152399231815,1.07735616342945,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,2.03991400112325,4.31762553310254,5.19821133958135,7.6164570806547,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,0.528901133327089,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,2.07516838961004,0,0.196558995113203,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0,0,0.505157755894224,4.66433275156972,4.82443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p7@Arsa | |||
}} |
Revision as of 20:24, 5 August 2015
Short description: | p7@Arsa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Arsa_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | -14bp_to_ENSMUST00000165199_5end |
EntrezGene: | 11883 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.54e-21 | 5 |
epithelial cell | 2.09e-15 | 25 |
endodermal cell | 4.90e-15 | 20 |
brush border epithelial cell | 8.96e-10 | 6 |
gut absorptive cell | 8.96e-10 | 6 |
enterocyte | 8.96e-10 | 6 |
columnar/cuboidal epithelial cell | 1.87e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
liver | 5.60e-14 | 22 |
epithelial sac | 5.60e-14 | 22 |
digestive gland | 5.60e-14 | 22 |
epithelium of foregut-midgut junction | 5.60e-14 | 22 |
anatomical boundary | 5.60e-14 | 22 |
hepatobiliary system | 5.60e-14 | 22 |
foregut-midgut junction | 5.60e-14 | 22 |
hepatic diverticulum | 5.60e-14 | 22 |
liver primordium | 5.60e-14 | 22 |
septum transversum | 5.60e-14 | 22 |
liver bud | 5.60e-14 | 22 |
digestive tract diverticulum | 2.40e-13 | 23 |
sac | 2.40e-13 | 23 |
exocrine gland | 3.10e-12 | 25 |
exocrine system | 3.10e-12 | 25 |
gut epithelium | 1.54e-10 | 55 |
unilaminar epithelium | 1.38e-08 | 66 |
endo-epithelium | 3.66e-08 | 69 |
intestinal mucosa | 6.91e-08 | 13 |
wall of intestine | 6.91e-08 | 13 |
gastrointestinal system mucosa | 6.91e-08 | 13 |
mucosa | 7.35e-07 | 15 |