FFCP PHASE1:Mm9::chr6:53989740..53989755,+: Difference between revisions
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{{FFCP|EntrezGene=69993|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=133bp_to_ENSMUST00000133315_5end|description=CAGE_peak_18_at_Chn2_5end|id=chr6:53989740..53989755,+|ontology_enrichment_celltype=CL:0000117!1.39e-08!23;CL:0000337!1.39e-08!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.73e-09!63;UBERON:0001017!2.50e-08!73;UBERON:0005743!2.50e-08!73;UBERON:0001049!2.59e-08!52;UBERON:0005068!2.59e-08!52;UBERON:0006241!2.59e-08!52;UBERON:0007135!2.59e-08!52;UBERON:0000955!2.87e-08!50;UBERON:0006238!2.87e-08!50;UBERON:0000073!8.13e-08!75;UBERON:0001016!8.13e-08!75;UBERON:0003056!1.08e-07!49;UBERON:0002346!1.12e-07!71;UBERON:0003075!1.12e-07!71;UBERON:0007284!1.12e-07!71;UBERON:0002616!1.27e-07!49;UBERON:0002020!1.64e-07!34;UBERON:0004121!4.90e-07!102;UBERON:0000924!4.90e-07!102;UBERON:0006601!4.90e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.72e-14,4;UBERON:0002680,8.72e-14,4;UBERON:0001895,8.72e-14,4;UBERON:0010092,8.72e-14,4;UBERON:0006215,8.72e-14,4;UBERON:0004733,1.61e-09,6;UBERON:0004732,1.61e-09,6;UBERON:0002028,1.61e-09,6;UBERON:0007277,1.61e-09,6|phase1_expression=0,0.697950815278722,0,1.20985684522732,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.47997726838022,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0,0.210324961351382,0.571301968807607,0.662605622854841,0.489963196859816,0.479227355091182,0,1.10115880999389,0.127687338085188,0.307213066512487,0.263772575460388,0.457438218012048,0,0.837548997004143,0.56276261003168,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0,0,7.02673912827713,5.44561437714983,0,0,0,0,0.149790639404823,0.457500602818626,0,0.521472960576829,0.255715457330331,0.20778804455956,0.648965052271031,0,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.408218994907967,0,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0.330418782983798,0.528901133327089,0.213288250535234,0,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.995706366271836,0.189667900953082,0,0,0.610953983535943,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0.482354319504834,0,0,0,0.274561413188081,0,0.744281895337007,1.5601883655728,0.505157755894224,0.179397413521912,0,0,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0,0.874442509889552,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0,0.247960367176008,0,0.129614973291793,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,0,1.84130094602871,0,1.03111909406213,0.685082519770642,0,0,0,0.906284817968409,0.51776031175182,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0|short_description=p18@Chn2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69993 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=133bp_to_ENSMUST00000133315_5end | |||
|cluster_id=chr6:53989740..53989755,+ | |||
|description=CAGE_peak_18_at_Chn2_5end | |||
|id=chr6:53989740..53989755,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.39e-08!23;CL:0000337!1.39e-08!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.73e-09!63;UBERON:0001017!2.50e-08!73;UBERON:0005743!2.50e-08!73;UBERON:0001049!2.59e-08!52;UBERON:0005068!2.59e-08!52;UBERON:0006241!2.59e-08!52;UBERON:0007135!2.59e-08!52;UBERON:0000955!2.87e-08!50;UBERON:0006238!2.87e-08!50;UBERON:0000073!8.13e-08!75;UBERON:0001016!8.13e-08!75;UBERON:0003056!1.08e-07!49;UBERON:0002346!1.12e-07!71;UBERON:0003075!1.12e-07!71;UBERON:0007284!1.12e-07!71;UBERON:0002616!1.27e-07!49;UBERON:0002020!1.64e-07!34;UBERON:0004121!4.90e-07!102;UBERON:0000924!4.90e-07!102;UBERON:0006601!4.90e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.72e-14,4;UBERON:0002680,8.72e-14,4;UBERON:0001895,8.72e-14,4;UBERON:0010092,8.72e-14,4;UBERON:0006215,8.72e-14,4;UBERON:0004733,1.61e-09,6;UBERON:0004732,1.61e-09,6;UBERON:0002028,1.61e-09,6;UBERON:0007277,1.61e-09,6 | |||
|phase1_expression=0,0.697950815278722,0,1.20985684522732,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.47997726838022,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0,0.210324961351382,0.571301968807607,0.662605622854841,0.489963196859816,0.479227355091182,0,1.10115880999389,0.127687338085188,0.307213066512487,0.263772575460388,0.457438218012048,0,0.837548997004143,0.56276261003168,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0,0,7.02673912827713,5.44561437714983,0,0,0,0,0.149790639404823,0.457500602818626,0,0.521472960576829,0.255715457330331,0.20778804455956,0.648965052271031,0,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.408218994907967,0,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0.330418782983798,0.528901133327089,0.213288250535234,0,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.995706366271836,0.189667900953082,0,0,0.610953983535943,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0.482354319504834,0,0,0,0.274561413188081,0,0.744281895337007,1.5601883655728,0.505157755894224,0.179397413521912,0,0,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,0.963963949265421,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0,0.874442509889552,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0,0.247960367176008,0,0.129614973291793,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,0,1.84130094602871,0,1.03111909406213,0.685082519770642,0,0,0,0.906284817968409,0.51776031175182,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p18@Chn2 | |||
}} |
Revision as of 23:16, 5 August 2015
Short description: | p18@Chn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Chn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 133bp_to_ENSMUST00000133315_5end |
EntrezGene: | 69993 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.72e-14 | 4 |
regional part of metencephalon | 8.72e-14 | 4 |
metencephalon | 8.72e-14 | 4 |
future metencephalon | 8.72e-14 | 4 |
rhombic lip | 8.72e-14 | 4 |
segmental subdivision of hindbrain | 1.61e-09 | 6 |
segmental subdivision of nervous system | 1.61e-09 | 6 |
hindbrain | 1.61e-09 | 6 |
presumptive hindbrain | 1.61e-09 | 6 |