FFCP PHASE1:Mm9::chr6:70408045..70408049,-: Difference between revisions
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{{FFCP|EntrezGene=19783|HGNC=|MCL_coexpression_id=804|UniProt=|association_with_transcript=-13bp_to_uc012enc.1_5end|description=CAGE_peak_1_at_Rprl1_5end|id=chr6:70408045..70408049,-|ontology_enrichment_celltype=CL:0000553!3.88e-11!6;CL:0000556!3.88e-11!6;CL:0000414!3.18e-07!11;CL:0000050!4.62e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,2.44e-19,6;CL:0000556,2.44e-19,6;CL:0000050,1.10e-12,9;CL:0002027,3.32e-10,3;CL:0002006,3.32e-10,3;CL:0002024,3.32e-10,3;CL:0000839,1.40e-08,13;CL:0000763,7.59e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.47e-10!51|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.13e-12,48;UBERON:0002405,6.13e-12,48;UBERON:0002465,6.18e-11,3;UBERON:0002106,2.08e-08,6;UBERON:0004457,2.08e-08,6;UBERON:0000042,2.08e-08,6;UBERON:0004854,2.08e-08,6;UBERON:0009034,2.08e-08,6;UBERON:0002095,2.08e-08,6;UBERON:0004782,2.08e-08,6;UBERON:0003281,2.08e-08,6;UBERON:0009664,2.08e-08,6;UBERON:0002296,2.08e-08,6;UBERON:0005602,2.08e-08,6;UBERON:0001179,2.08e-08,6;UBERON:0006293,2.08e-08,6;UBERON:0007023,4.70e-08,51;UBERON:0002390,9.59e-08,45;UBERON:0003061,9.59e-08,45;UBERON:0001962,1.00e-07,2;UBERON:0001961,1.00e-07,2;UBERON:0001744,1.00e-07,2;UBERON:0001155,1.25e-07,2;UBERON:0000059,1.25e-07,2;UBERON:0004923,2.77e-07,24;UBERON:0002371,7.59e-07,16|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,16.6554880907831,7.28910962603373,2.79824751251259,15.6153771852328,12.3402990245165,12.3072999021429,1.78590909317247,0,0,9.27956052201759,18.3527424853736,0,0,0,0,4.28451220591882,0,0,0,0,0,0,0,0,0,0,0,0,1.45653105909346,0,0,0,0,0,0,0,0,0,10.4025215755797,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.53970027129086,29.0010429684832,0.29688427812965,0,0,0,0,0,0,0,0.289198713839823,7.07688441559899,0,0.883366073841574,0,5.59175283654366,0,0,42.1504141094176,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0,0,0,9.25172592354634,6.61126416658861,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,0,0,0,1.84753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.659880491890142,2.65490276679926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,26.3141156428693,0,0,1.13021074202815,3.8274383761887,4.34678529092393,1.86976272993241,7.55737842547753,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,1.25075394132428,0.233753804363138,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Rprl1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19783 | |||
|HGNC= | |||
|MCL_coexpression_id=804 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_uc012enc.1_5end | |||
|cluster_id=chr6:70408045..70408049,- | |||
|description=CAGE_peak_1_at_Rprl1_5end | |||
|id=chr6:70408045..70408049,- | |||
|ontology_enrichment_celltype=CL:0000553!3.88e-11!6;CL:0000556!3.88e-11!6;CL:0000414!3.18e-07!11;CL:0000050!4.62e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.44e-19,6;CL:0000556,2.44e-19,6;CL:0000050,1.10e-12,9;CL:0002027,3.32e-10,3;CL:0002006,3.32e-10,3;CL:0002024,3.32e-10,3;CL:0000839,1.40e-08,13;CL:0000763,7.59e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.47e-10!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.13e-12,48;UBERON:0002405,6.13e-12,48;UBERON:0002465,6.18e-11,3;UBERON:0002106,2.08e-08,6;UBERON:0004457,2.08e-08,6;UBERON:0000042,2.08e-08,6;UBERON:0004854,2.08e-08,6;UBERON:0009034,2.08e-08,6;UBERON:0002095,2.08e-08,6;UBERON:0004782,2.08e-08,6;UBERON:0003281,2.08e-08,6;UBERON:0009664,2.08e-08,6;UBERON:0002296,2.08e-08,6;UBERON:0005602,2.08e-08,6;UBERON:0001179,2.08e-08,6;UBERON:0006293,2.08e-08,6;UBERON:0007023,4.70e-08,51;UBERON:0002390,9.59e-08,45;UBERON:0003061,9.59e-08,45;UBERON:0001962,1.00e-07,2;UBERON:0001961,1.00e-07,2;UBERON:0001744,1.00e-07,2;UBERON:0001155,1.25e-07,2;UBERON:0000059,1.25e-07,2;UBERON:0004923,2.77e-07,24;UBERON:0002371,7.59e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,16.6554880907831,7.28910962603373,2.79824751251259,15.6153771852328,12.3402990245165,12.3072999021429,1.78590909317247,0,0,9.27956052201759,18.3527424853736,0,0,0,0,4.28451220591882,0,0,0,0,0,0,0,0,0,0,0,0,1.45653105909346,0,0,0,0,0,0,0,0,0,10.4025215755797,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.53970027129086,29.0010429684832,0.29688427812965,0,0,0,0,0,0,0,0.289198713839823,7.07688441559899,0,0.883366073841574,0,5.59175283654366,0,0,42.1504141094176,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0,0,0,9.25172592354634,6.61126416658861,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,0,0,0,1.84753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.659880491890142,2.65490276679926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,26.3141156428693,0,0,1.13021074202815,3.8274383761887,4.34678529092393,1.86976272993241,7.55737842547753,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,1.25075394132428,0.233753804363138,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Rprl1 | |||
}} |
Revision as of 01:36, 6 August 2015
Short description: | p1@Rprl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rprl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:804 |
Association with transcript: | -13bp_to_uc012enc.1_5end |
EntrezGene: | 19783 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.44e-19 | 6 |
megakaryocyte | 2.44e-19 | 6 |
megakaryocyte-erythroid progenitor cell | 1.10e-12 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 3.32e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.32e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.32e-10 | 3 |
myeloid lineage restricted progenitor cell | 1.40e-08 | 13 |
myeloid cell | 7.59e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.13e-12 | 48 |
immune system | 6.13e-12 | 48 |
lymphoid system | 6.18e-11 | 3 |
spleen | 2.08e-08 | 6 |
cavity lining | 2.08e-08 | 6 |
serous membrane | 2.08e-08 | 6 |
gastrointestinal system mesentery | 2.08e-08 | 6 |
stomach region | 2.08e-08 | 6 |
mesentery | 2.08e-08 | 6 |
gastrointestinal system serosa | 2.08e-08 | 6 |
mesentery of stomach | 2.08e-08 | 6 |
gut mesentery | 2.08e-08 | 6 |
dorsal mesentery | 2.08e-08 | 6 |
dorsal mesogastrium | 2.08e-08 | 6 |
peritoneal cavity | 2.08e-08 | 6 |
spleen primordium | 2.08e-08 | 6 |
adult organism | 4.70e-08 | 51 |
hematopoietic system | 9.59e-08 | 45 |
blood island | 9.59e-08 | 45 |
gut-associated lymphoid tissue | 1.00e-07 | 2 |
mucosa-associated lymphoid tissue | 1.00e-07 | 2 |
lymphoid tissue | 1.00e-07 | 2 |
colon | 1.25e-07 | 2 |
large intestine | 1.25e-07 | 2 |
organ component layer | 2.77e-07 | 24 |
bone marrow | 7.59e-07 | 16 |