FFCP PHASE1:Mm9::chr1:97564097..97564117,-: Difference between revisions
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{{FFCP|EntrezGene=20452|HGNC=|MCL_coexpression_id=3291|UniProt=Q64692,Q53WR7,Q6PAS1|association_with_transcript=53bp_to_ENSMUST00000043336,NM_001159745,NM_009183,uc007cfa.1,uc011wpu.1_5end|description=CAGE_peak_2_at_St8sia4_5end|id=chr1:97564097..97564117,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,9.42e-07,32;CL:0002032,9.42e-07,32;CL:0000037,9.42e-07,32;CL:0000837,9.42e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.83e-10!48;UBERON:0002390!2.06e-09!45;UBERON:0003061!2.06e-09!45|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48;UBERON:0002390,3.64e-10,45;UBERON:0003061,3.64e-10,45;UBERON:0001004,3.39e-08,42;UBERON:0000065,7.51e-08,41;UBERON:0004177,1.74e-07,29;UBERON:0005057,1.74e-07,29|phase1_expression=0.80074423552397,0,0,0,0,0,0,19.6267451631196,9.43284438416167,6.31974221069382,0.34243593645101,0.558405112967355,17.1200729931206,15.5608316305815,5.66286595086627,6.07425802169478,2.09868563438444,17.8236123427404,20.7042794744666,17.8243653755173,2.12608225377674,0.992909512008853,1.56719873483361,2.23989391910769,3.44113921600755,0.57423196411502,0,0,0.190023419456374,1.51218077855958,0.221730510655305,0,0,0,0,0,0,5.85944283031671,10.1573594788094,3.66466620781659,16.4704816648684,12.9778642142105,5.34061388334269,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,15.6037823633695,15.9579671242496,12.7715643674136,0,0,0,2.63011399117477,2.11596391708813,2.53532561402472,0,0,0.899899717281399,0.988866362566974,4.2628806896766,0,1.15265491596466,3.11068836925433,1.08004750665353,2.94454945891935,2.28520787523043,1.54607978666129,3.06226998037385,0.862609239164127,0.919218786610021,6.60695285996332,2.17068474744819,1.68967186581868,2.1101806036831,0.548925861614458,2.6045668527838,1.67509799400829,3.37657566019008,2.59757021220577,4.12480019663135,4.27115042397309,5.77838282058432,0.681535739998656,0.226714680320357,0.289864488701678,0,0,0,0,0.896053774194671,2.10666630197628,0,0,0,0,0,0,0,0,0,0,2.51204535381932,32.6261733395436,0.742210695324124,0.867426633830679,0,0.461230994512117,0.452167921657868,1.17588707135705,0.502666365318702,0,2.89198713839823,7.07688441559899,1.7794353494215,6.40440403535141,6.78825354389311,0,0.878342391034642,1.04723353406728,1.27728527604296,24.5621005237137,5.39912457894067,22.1102195107133,0.748953197024114,0.915001205637253,8.16753288733619,2.43354048269187,1.27857728665165,1.87009240103604,0.973447578406546,0.509196819251581,6.59356944233493,0.505445516867349,1.05220927943237,1.04096354370163,0.229902104433473,1.62055916824814,2.26057226753573,1.56483948048054,1.15302348256365,1.59292931751539,0,0.215567992932842,0.945530400839096,0.879755620819744,0.657587197282725,0.556094498451196,1.0447564995665,0.61734640922383,0.995171334092466,1.40442637462647,1.54408744268829,9.37739548005456,0,0.469052119962192,0.180062061461015,0.473489471170421,1.18058539048442,0.154267112887378,1.86027155800326,0.804820204198858,0.934122738937356,0.493679549740441,2.46251196118643,3.56702762001765,4.09359964790931,3.29325172936576,2.54992195644706,1.05144974282064,3.70456604565424,0.991256348951394,0.793351699990633,1.06644125267617,0.928946687441754,1.15980715189884,0.403367049246685,1.55664630691409,0.760902504450237,0.474529061544512,0.494096864172033,0.502670417600539,1.1937388322469,0.779856348476481,1.79763881730844,1.08069024937347,1.59313018603494,0.189667900953082,0.685491075658373,1.1270773567308,0.610953983535943,1.16371492300575,0.210407459670956,0.569128834118316,0.295220295959204,0.627994911365499,0.246794327843601,0,0.667380422864376,0.589676985339609,0.224862112384854,1.42002084971952,1.20588579876208,1.78238096246994,2.30156909960649,2.2698931748505,0.823684239564244,0,1.48856379067401,1.5601883655728,1.01031551178845,0.358794827043824,0,8.49864674766381,1.70542270593436,1.62964976442026,2.37643120085263,2.81628297946203,3.35012514883632,2.14239276797412,2.92700471786698,6.30540576424764,5.97954662051692,10.2051051940792,5.89907932976657,9.49767400262426,7.5217510462386,10.5553898757491,8.70249094109935,1.96705709207614,2.75936746304733,1.9266070798535,1.52375192569864,0,2.52470927204373,0,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,0,2.57057053137446,0.709700426041343,0.534196811001766,1.14020871547503,1.64970122972535,5.30980553359851,1.94224508923985,0.604647113929502,0.754420319023592,0.885905678642318,2.76691633149535,2.06742634534577,1.81766864738753,0.712994756769443,1.26414703174326,0,1.03135543248187,0.340439605753788,1.08036656418786,0.129358683782755,0.857348140126369,0.354680467284547,0.356737635204141,0.822745103010605,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,1.15420377059036,0.807322133479528,1.26657142349127,0.596861720015682,0.328281799490123,2.04036585640896,1.8542530201051,9.56876932467975,5.57244543500701,6.85219751267933,3.95573759709851,5.05768642567793,5.490676156956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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20452 | |||
|HGNC= | |||
|MCL_coexpression_id=3291 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q64692,uniprot:Q53WR7,uniprot:Q6PAS1 | |||
|association_with_transcript=53bp_to_ENSMUST00000043336,NM_001159745,NM_009183,uc007cfa.1,uc011wpu.1_5end | |||
|cluster_id=chr1:97564097..97564117,- | |||
|description=CAGE_peak_2_at_St8sia4_5end | |||
|id=chr1:97564097..97564117,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.42e-07,32;CL:0002032,9.42e-07,32;CL:0000037,9.42e-07,32;CL:0000837,9.42e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.83e-10!48;UBERON:0002390!2.06e-09!45;UBERON:0003061!2.06e-09!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.55e-11,48;UBERON:0002405,2.55e-11,48;UBERON:0002390,3.64e-10,45;UBERON:0003061,3.64e-10,45;UBERON:0001004,3.39e-08,42;UBERON:0000065,7.51e-08,41;UBERON:0004177,1.74e-07,29;UBERON:0005057,1.74e-07,29 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,19.6267451631196,9.43284438416167,6.31974221069382,0.34243593645101,0.558405112967355,17.1200729931206,15.5608316305815,5.66286595086627,6.07425802169478,2.09868563438444,17.8236123427404,20.7042794744666,17.8243653755173,2.12608225377674,0.992909512008853,1.56719873483361,2.23989391910769,3.44113921600755,0.57423196411502,0,0,0.190023419456374,1.51218077855958,0.221730510655305,0,0,0,0,0,0,5.85944283031671,10.1573594788094,3.66466620781659,16.4704816648684,12.9778642142105,5.34061388334269,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,15.6037823633695,15.9579671242496,12.7715643674136,0,0,0,2.63011399117477,2.11596391708813,2.53532561402472,0,0,0.899899717281399,0.988866362566974,4.2628806896766,0,1.15265491596466,3.11068836925433,1.08004750665353,2.94454945891935,2.28520787523043,1.54607978666129,3.06226998037385,0.862609239164127,0.919218786610021,6.60695285996332,2.17068474744819,1.68967186581868,2.1101806036831,0.548925861614458,2.6045668527838,1.67509799400829,3.37657566019008,2.59757021220577,4.12480019663135,4.27115042397309,5.77838282058432,0.681535739998656,0.226714680320357,0.289864488701678,0,0,0,0,0.896053774194671,2.10666630197628,0,0,0,0,0,0,0,0,0,0,2.51204535381932,32.6261733395436,0.742210695324124,0.867426633830679,0,0.461230994512117,0.452167921657868,1.17588707135705,0.502666365318702,0,2.89198713839823,7.07688441559899,1.7794353494215,6.40440403535141,6.78825354389311,0,0.878342391034642,1.04723353406728,1.27728527604296,24.5621005237137,5.39912457894067,22.1102195107133,0.748953197024114,0.915001205637253,8.16753288733619,2.43354048269187,1.27857728665165,1.87009240103604,0.973447578406546,0.509196819251581,6.59356944233493,0.505445516867349,1.05220927943237,1.04096354370163,0.229902104433473,1.62055916824814,2.26057226753573,1.56483948048054,1.15302348256365,1.59292931751539,0,0.215567992932842,0.945530400839096,0.879755620819744,0.657587197282725,0.556094498451196,1.0447564995665,0.61734640922383,0.995171334092466,1.40442637462647,1.54408744268829,9.37739548005456,0,0.469052119962192,0.180062061461015,0.473489471170421,1.18058539048442,0.154267112887378,1.86027155800326,0.804820204198858,0.934122738937356,0.493679549740441,2.46251196118643,3.56702762001765,4.09359964790931,3.29325172936576,2.54992195644706,1.05144974282064,3.70456604565424,0.991256348951394,0.793351699990633,1.06644125267617,0.928946687441754,1.15980715189884,0.403367049246685,1.55664630691409,0.760902504450237,0.474529061544512,0.494096864172033,0.502670417600539,1.1937388322469,0.779856348476481,1.79763881730844,1.08069024937347,1.59313018603494,0.189667900953082,0.685491075658373,1.1270773567308,0.610953983535943,1.16371492300575,0.210407459670956,0.569128834118316,0.295220295959204,0.627994911365499,0.246794327843601,0,0.667380422864376,0.589676985339609,0.224862112384854,1.42002084971952,1.20588579876208,1.78238096246994,2.30156909960649,2.2698931748505,0.823684239564244,0,1.48856379067401,1.5601883655728,1.01031551178845,0.358794827043824,0,8.49864674766381,1.70542270593436,1.62964976442026,2.37643120085263,2.81628297946203,3.35012514883632,2.14239276797412,2.92700471786698,6.30540576424764,5.97954662051692,10.2051051940792,5.89907932976657,9.49767400262426,7.5217510462386,10.5553898757491,8.70249094109935,1.96705709207614,2.75936746304733,1.9266070798535,1.52375192569864,0,2.52470927204373,0,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,0,2.57057053137446,0.709700426041343,0.534196811001766,1.14020871547503,1.64970122972535,5.30980553359851,1.94224508923985,0.604647113929502,0.754420319023592,0.885905678642318,2.76691633149535,2.06742634534577,1.81766864738753,0.712994756769443,1.26414703174326,0,1.03135543248187,0.340439605753788,1.08036656418786,0.129358683782755,0.857348140126369,0.354680467284547,0.356737635204141,0.822745103010605,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,1.15420377059036,0.807322133479528,1.26657142349127,0.596861720015682,0.328281799490123,2.04036585640896,1.8542530201051,9.56876932467975,5.57244543500701,6.85219751267933,3.95573759709851,5.05768642567793,5.49067615695654,14.4481665494777,13.2953879707475,13.2671974852247,0.954670618015114,1.26534397432454,1.01659733563424,1.08005340821801,0.627264888043406,1.09181281873089,1.48350781023303,1.07449492442937,1.30877970992015,0.648074866458964,3.72803587852155,0,0.448549638131936,0.496375471371293,0.388902376688095,0.904118764344118,0.675824501963113,0.58678619322877,0.39061315453185,0.209718688851422,0.483168241652012,0.576060012515731,5.37218905067903,0.608175645870493,2.97861775777999,3.11809975146708,2.50637373934474,3.77494574084403,5.88957702647847,6.05527061415767,7.87538309595551,5.94413091908999,7.4611377001262,5.84747284438514,8.85148943091031,10.2851673919781,1.58711268530648,0,0.0897138566094757,0,1.54551675225752,2.43987218086537,1.28206136987086,0.428736758158132,1.00314420807073,1.6942555278512,0.460325236507177,1.14579102687879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| |||
|short_description=p2@St8sia4 | |||
}} |
Revision as of 06:18, 6 August 2015
Short description: | p2@St8sia4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_St8sia4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3291 |
Association with transcript: | 53bp_to_ENSMUST00000043336, NM_001159745, NM_009183, uc007cfa.1, uc011wpu.1_5end |
EntrezGene: | 20452 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.42e-07 | 32 |
hematopoietic oligopotent progenitor cell | 9.42e-07 | 32 |
hematopoietic stem cell | 9.42e-07 | 32 |
hematopoietic multipotent progenitor cell | 9.42e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.55e-11 | 48 |
immune system | 2.55e-11 | 48 |
hematopoietic system | 3.64e-10 | 45 |
blood island | 3.64e-10 | 45 |
respiratory system | 3.39e-08 | 42 |
respiratory tract | 7.51e-08 | 41 |
hemopoietic organ | 1.74e-07 | 29 |
immune organ | 1.74e-07 | 29 |