FFCP PHASE1:Mm9::chr2:103103766..103103770,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:103103766..103103770,-|id=chr2:103103766..103103770,-|ontology_enrichment_celltype=CL:0000068!5.18e-07!3;CL:0002202!5.18e-07!3;CL:0000069!5.18e-07!3;CL:0002632!5.18e-07!3;CL:0002368!5.18e-07!3;CL:0000307!5.18e-07!3;CL:0000377!5.18e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,7.38e-28,3;CL:0002202,7.38e-28,3;CL:0000069,7.38e-28,3;CL:0002632,7.38e-28,3;CL:0002368,7.38e-28,3;CL:0000307,7.38e-28,3;CL:0000377,7.38e-28,3;CL:0002076,6.41e-10,15;CL:0000223,1.65e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!2.44e-07!128;UBERON:0001555!2.44e-07!128;UBERON:0007026!2.44e-07!128;UBERON:0004119!4.24e-07!130;UBERON:0000925!4.24e-07!130;UBERON:0006595!4.24e-07!130;UBERON:0003126!5.18e-07!3;UBERON:0001005!5.18e-07!3;UBERON:0007196!5.18e-07!3;UBERON:0001558!5.18e-07!3;UBERON:0004921!6.59e-07!126;UBERON:0004185!6.59e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.38e-28,3;UBERON:0001005,7.38e-28,3;UBERON:0007196,7.38e-28,3;UBERON:0001558,7.38e-28,3;UBERON:0001153,3.74e-10,1;UBERON:0001045,3.74e-10,1;UBERON:0000998,4.59e-10,1;UBERON:0007194,4.59e-10,1;UBERON:0006868,4.59e-10,1;UBERON:0000996,8.42e-10,1;UBERON:0000080,1.54e-09,4;UBERON:0005904,1.54e-09,4;UBERON:0006947,1.54e-09,4;UBERON:0002120,1.54e-09,4;UBERON:0004054,1.54e-09,4;UBERON:0004875,1.54e-09,4;UBERON:0004876,1.54e-09,4;UBERON:0005721,1.54e-09,4;UBERON:0005754,1.54e-09,4;UBERON:0007297,1.54e-09,4;UBERON:0004175,3.45e-09,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0.215471232685889,0.570070258369122,1.26015064879965,0.443461021310609,0,0,0,0.866554859253824,1.16364251750945,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,3.89683873820185,2.78695852022608,4.04419556011827,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0.796565093017469,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.216010681643603,0.627264888043406,0.218362563746178,0.404593039154462,0,0.785267825952089,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,1.07184189539533,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr2:103103766..103103770,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:103103766..103103770,- | |||
|description=CAGE_peak_at_chr2:103103766..103103770,- | |||
|id=chr2:103103766..103103770,- | |||
|ontology_enrichment_celltype=CL:0000068!5.18e-07!3;CL:0002202!5.18e-07!3;CL:0000069!5.18e-07!3;CL:0002632!5.18e-07!3;CL:0002368!5.18e-07!3;CL:0000307!5.18e-07!3;CL:0000377!5.18e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.38e-28,3;CL:0002202,7.38e-28,3;CL:0000069,7.38e-28,3;CL:0002632,7.38e-28,3;CL:0002368,7.38e-28,3;CL:0000307,7.38e-28,3;CL:0000377,7.38e-28,3;CL:0002076,6.41e-10,15;CL:0000223,1.65e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!2.44e-07!128;UBERON:0001555!2.44e-07!128;UBERON:0007026!2.44e-07!128;UBERON:0004119!4.24e-07!130;UBERON:0000925!4.24e-07!130;UBERON:0006595!4.24e-07!130;UBERON:0003126!5.18e-07!3;UBERON:0001005!5.18e-07!3;UBERON:0007196!5.18e-07!3;UBERON:0001558!5.18e-07!3;UBERON:0004921!6.59e-07!126;UBERON:0004185!6.59e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.38e-28,3;UBERON:0001005,7.38e-28,3;UBERON:0007196,7.38e-28,3;UBERON:0001558,7.38e-28,3;UBERON:0001153,3.74e-10,1;UBERON:0001045,3.74e-10,1;UBERON:0000998,4.59e-10,1;UBERON:0007194,4.59e-10,1;UBERON:0006868,4.59e-10,1;UBERON:0000996,8.42e-10,1;UBERON:0000080,1.54e-09,4;UBERON:0005904,1.54e-09,4;UBERON:0006947,1.54e-09,4;UBERON:0002120,1.54e-09,4;UBERON:0004054,1.54e-09,4;UBERON:0004875,1.54e-09,4;UBERON:0004876,1.54e-09,4;UBERON:0005721,1.54e-09,4;UBERON:0005754,1.54e-09,4;UBERON:0007297,1.54e-09,4;UBERON:0004175,3.45e-09,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0.215471232685889,0.570070258369122,1.26015064879965,0.443461021310609,0,0,0,0.866554859253824,1.16364251750945,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,3.89683873820185,2.78695852022608,4.04419556011827,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0.796565093017469,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.216010681643603,0.627264888043406,0.218362563746178,0.404593039154462,0,0.785267825952089,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,1.07184189539533,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr2:103103766..103103770,- | |||
}} |
Latest revision as of 07:25, 6 August 2015
Short description: | p@chr2:103103766..103103770, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:103103766..103103770, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.38e-28 | 3 |
epithelial cell of tracheobronchial tree | 7.38e-28 | 3 |
branched duct epithelial cell | 7.38e-28 | 3 |
epithelial cell of lower respiratory tract | 7.38e-28 | 3 |
respiratory epithelial cell | 7.38e-28 | 3 |
tracheal epithelial cell | 7.38e-28 | 3 |
tracheoblast | 7.38e-28 | 3 |
endo-epithelial cell | 6.41e-10 | 15 |
endodermal cell | 1.65e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 7.38e-28 | 3 |
respiratory airway | 7.38e-28 | 3 |
tracheobronchial tree | 7.38e-28 | 3 |
lower respiratory tract | 7.38e-28 | 3 |
caecum | 3.74e-10 | 1 |
midgut | 3.74e-10 | 1 |
seminal vesicle | 4.59e-10 | 1 |
vesicular gland | 4.59e-10 | 1 |
seminal fluid secreting gland | 4.59e-10 | 1 |
vagina | 8.42e-10 | 1 |
mesonephros | 1.54e-09 | 4 |
duct of male reproductive system | 1.54e-09 | 4 |
male genital duct | 1.54e-09 | 4 |
pronephros | 1.54e-09 | 4 |
internal male genitalia | 1.54e-09 | 4 |
nephrogenic cord | 1.54e-09 | 4 |
urogenital ridge | 1.54e-09 | 4 |
pronephric mesoderm | 1.54e-09 | 4 |
rostral part of nephrogenic cord | 1.54e-09 | 4 |
presumptive pronephric mesoderm | 1.54e-09 | 4 |
internal genitalia | 3.45e-09 | 9 |