FFCP PHASE2:Hg19::chr7:121944689..121944705,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:389549 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:22788 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=389549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=22788 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A0PJY2 | ||
|association_with_transcript=-124bp_to_NM_001024613,NM_001160264,uc003vkc.2,uc003vkd.2_5end | |association_with_transcript=-124bp_to_NM_001024613,NM_001160264,uc003vkc.2,uc003vkd.2_5end | ||
|cluster_id=chr7:121944689..121944705,- | |cluster_id=chr7:121944689..121944705,- | ||
Latest revision as of 23:18, 15 September 2015
| Short description: | p2@FEZF1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_FEZF1_5end |
| Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
| Association with transcript: | -124bp_to_NM_001024613, NM_001160264, uc003vkc.2, uc003vkd.2_5end |
| EntrezGene: | FEZF1 |
| HGNC: | 22788 |
| UniProt: | A0PJY2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@FEZF1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic stem cell | 9.05e-53 | 5 |
| melanocyte | 1.52e-07 | 10 |
| melanoblast | 1.52e-07 | 10 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| sympathetic nervous system | 1.84e-14 | 5 |
| autonomic nervous system | 1.84e-14 | 5 |
| neural tissue | 8.69e-10 | 2 |
| peripheral nervous system | 1.90e-08 | 8 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 8.64e-42 | 10 |
| germ cell and embryonal cancer | 4.12e-19 | 22 |
| germ cell cancer | 4.12e-19 | 22 |
| neuroendocrine tumor | 3.26e-12 | 6 |
| peripheral nerve sheath neoplasm | 8.69e-10 | 2 |
| neurofibroma | 8.69e-10 | 2 |
| peripheral nervous system neoplasm | 6.14e-07 | 3 |
Showing 1 to 7 of 7 entries
