FFCP PHASE1:Hg19::chr9:136242894..136242905,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11476 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5T8U5 | ||
|association_with_transcript=8bp_to_ENST00000371991_5end | |association_with_transcript=8bp_to_ENST00000371991_5end | ||
|cluster_id=chr9:136242894..136242905,- | |cluster_id=chr9:136242894..136242905,- |
Latest revision as of 06:58, 16 September 2015
Short description: | p4@SURF4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SURF4_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 8bp_to_ENST00000371991_5end |
EntrezGene: | SURF4 |
HGNC: | 11476 |
UniProt: | Q5T8U5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@SURF4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 6.31e-20 | 121 |
embryonic cell | 6.12e-18 | 250 |
multi fate stem cell | 2.11e-16 | 427 |
somatic stem cell | 5.09e-16 | 433 |
stem cell | 1.47e-15 | 441 |
muscle precursor cell | 1.86e-15 | 58 |
myoblast | 1.86e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.86e-15 | 58 |
muscle cell | 1.23e-14 | 55 |
smooth muscle cell | 2.72e-14 | 43 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
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epithelial tube | 3.23e-21 | 117 |
unilaminar epithelium | 4.21e-19 | 148 |
vasculature | 2.92e-18 | 78 |
vascular system | 2.92e-18 | 78 |
epithelial vesicle | 1.14e-16 | 78 |
artery | 1.33e-16 | 42 |
arterial blood vessel | 1.33e-16 | 42 |
arterial system | 1.33e-16 | 42 |
vessel | 2.75e-16 | 68 |
cardiovascular system | 7.55e-16 | 109 |
Showing 1 to 10 of 40 entries