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FFCP PHASE2:Hg19::chr3:181429781..181429793,+: Difference between revisions

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|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:6657
|EntrezGene=6657
|HGNC=HGNC:11195
|HGNC=11195
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:P48431
|UniProt=P48431
|association_with_transcript=59bp_to_ENST00000325404,uc003fkx.2_5end
|association_with_transcript=59bp_to_ENST00000325404,uc003fkx.2_5end
|cluster_id=chr3:181429781..181429793,+
|cluster_id=chr3:181429781..181429793,+

Latest revision as of 22:11, 16 September 2015

Short description:p7@SOX2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_7_at_SOX2_5end
Coexpression cluster:NA
Association with transcript: 59bp_to_ENST00000325404, uc003fkx.2_5end
EntrezGene:SOX2
HGNC: 11195
UniProt: P48431
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data