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FFCP PHASE2:Hg19::chr11:27742115..27742119,-: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:627 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1033 |TSSclassi...")
 
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|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:627
|EntrezGene=627
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:1033
|HGNC=1033
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:P23560
|UniProt=P23560
|association_with_transcript=150bp_to_ENST00000395978,ENST00000395981_5end
|association_with_transcript=150bp_to_ENST00000395978,ENST00000395981_5end
|cluster_id=chr11:27742115..27742119,-
|cluster_id=chr11:27742115..27742119,-

Latest revision as of 12:37, 17 September 2015

Short description:p17@BDNF
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_17_at_BDNF_5end
Coexpression cluster:C11_cerebellum_medulla_pons_parietal_occipital_middle_medial
Association with transcript: 150bp_to_ENST00000395978, ENST00000395981_5end
EntrezGene:BDNF
HGNC: 1033
UniProt: P23560
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data