FFCP PHASE2:Hg19::chr11:27742115..27742119,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:627 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1033 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1033 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P23560 | ||
|association_with_transcript=150bp_to_ENST00000395978,ENST00000395981_5end | |association_with_transcript=150bp_to_ENST00000395978,ENST00000395981_5end | ||
|cluster_id=chr11:27742115..27742119,- | |cluster_id=chr11:27742115..27742119,- |
Latest revision as of 12:37, 17 September 2015
Short description: | p17@BDNF |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_BDNF_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 150bp_to_ENST00000395978, ENST00000395981_5end |
EntrezGene: | BDNF |
HGNC: | 1033 |
UniProt: | P23560 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p17@BDNF |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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regional part of metencephalon | 4.91e-91 | 9 |
metencephalon | 4.91e-91 | 9 |
future metencephalon | 4.91e-91 | 9 |
segmental subdivision of hindbrain | 1.67e-68 | 12 |
hindbrain | 1.67e-68 | 12 |
presumptive hindbrain | 1.67e-68 | 12 |
segmental subdivision of nervous system | 2.67e-63 | 13 |
posterior neural tube | 5.67e-55 | 15 |
chordal neural plate | 5.67e-55 | 15 |
cerebellum | 3.84e-50 | 6 |
Showing 1 to 10 of 31 entries