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FFCP PHASE2:Hg19::chr5:52084087..52084115,+: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3672 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6134 |TSSclass...")
 
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|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:3672
|EntrezGene=3672
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:6134
|HGNC=6134
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:P56199
|UniProt=P56199
|association_with_transcript=-20bp_to_NM_181501_5end
|association_with_transcript=-20bp_to_NM_181501_5end
|cluster_id=chr5:52084087..52084115,+
|cluster_id=chr5:52084087..52084115,+

Latest revision as of 02:21, 18 September 2015

Short description:p5@ITGA1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_ITGA1_5end
Coexpression cluster:C1277_Hepatocyte_mature_mesenchymal_smooth_bladder_normal_cholangiocellular
Association with transcript: -20bp_to_NM_181501_5end
EntrezGene:ITGA1
HGNC: 6134
UniProt: P56199
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data