FFCP PHASE2:Hg19::chr5:52095914..52095954,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:53918 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:8829 |TSSclassifier=strong...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=53918 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=8829 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9BRX2 | ||
|association_with_transcript=0bp_to_AK025729,BC007650_5end | |association_with_transcript=0bp_to_AK025729,BC007650_5end | ||
|cluster_id=chr5:52095914..52095954,+ | |cluster_id=chr5:52095914..52095954,+ | ||
Latest revision as of 02:23, 18 September 2015
| Short description: | p1@PELO |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_PELO_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_AK025729, BC007650_5end |
| EntrezGene: | PELO |
| HGNC: | 8829 |
| UniProt: | Q9BRX2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@PELO |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| electrically responsive cell | 2.23e-09 | 61 |
| electrically active cell | 2.23e-09 | 61 |
| fibroblast | 3.53e-09 | 76 |
| muscle precursor cell | 8.90e-09 | 58 |
| myoblast | 8.90e-09 | 58 |
| multi-potent skeletal muscle stem cell | 8.90e-09 | 58 |
| embryonic cell | 1.36e-08 | 250 |
| muscle cell | 2.89e-08 | 55 |
| smooth muscle cell | 3.69e-08 | 43 |
| smooth muscle myoblast | 3.69e-08 | 43 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelium | 2.46e-11 | 306 |
| cell layer | 3.61e-11 | 309 |
| trunk | 1.67e-09 | 199 |
| multilaminar epithelium | 1.87e-09 | 83 |
| dense mesenchyme tissue | 5.10e-09 | 73 |
| paraxial mesoderm | 5.15e-09 | 72 |
| presumptive paraxial mesoderm | 5.15e-09 | 72 |
| somite | 9.64e-09 | 71 |
| presomitic mesoderm | 9.64e-09 | 71 |
| presumptive segmental plate | 9.64e-09 | 71 |
Showing 1 to 10 of 23 entries
