FFCP PHASE2:Hg19::chrX:108297807..108297838,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene= |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA |HGNC=HGNC:37659 |TSSclassifier=strong |UniProt= ...") |
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|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC=37659 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 00:05, 19 September 2015
| Short description: | p2@RN28S1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_RN28S1_5end |
| Coexpression cluster: | C222_Melanocyte_Tracheal_Neutrophils_seminal_Smooth_Hair_Chondrocyte |
| Association with transcript: | -15bp_to_ENST00000419932_5end |
| EntrezGene: | NA |
| HGNC: | 37659 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@RN28S1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| muscle precursor cell | 1.44e-07 | 58 |
| myoblast | 1.44e-07 | 58 |
| multi-potent skeletal muscle stem cell | 1.44e-07 | 58 |
| smooth muscle cell | 4.19e-07 | 43 |
| smooth muscle myoblast | 4.19e-07 | 43 |
| vascular associated smooth muscle cell | 6.05e-07 | 32 |
| mesodermal cell | 6.92e-07 | 121 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 3.97e-10 | 78 |
| dense mesenchyme tissue | 4.74e-09 | 73 |
| somite | 6.93e-09 | 71 |
| presomitic mesoderm | 6.93e-09 | 71 |
| presumptive segmental plate | 6.93e-09 | 71 |
| dermomyotome | 6.93e-09 | 71 |
| trunk paraxial mesoderm | 6.93e-09 | 71 |
| paraxial mesoderm | 1.49e-08 | 72 |
| presumptive paraxial mesoderm | 1.49e-08 | 72 |
| skeletal muscle tissue | 2.35e-08 | 62 |
Showing 1 to 10 of 25 entries
