FFCP PHASE1:Hg19::chr10:71333172..71333186,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=50674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=13806 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9Y4Z2 | ||
|association_with_transcript=23bp_to_NM_020999_5end | |association_with_transcript=23bp_to_NM_020999_5end | ||
|cluster_id=chr10:71333172..71333186,- | |cluster_id=chr10:71333172..71333186,- | ||
Latest revision as of 01:09, 19 September 2015
| Short description: | p1@NEUROG3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_NEUROG3_5end |
| Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
| Association with transcript: | 23bp_to_NM_020999_5end |
| EntrezGene: | NEUROG3 |
| HGNC: | 13806 |
| UniProt: | Q9Y4Z2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@NEUROG3 |
|---|
0
25
50
75
100
125
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| subcutaneous fat cell | 5.30e-17 | 3 |
| fat cell | 5.84e-13 | 15 |
| adipocyte of breast | 3.09e-07 | 2 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| intestine | 5.10e-23 | 17 |
| small intestine | 1.48e-21 | 4 |
| subcutaneous adipose tissue | 5.30e-17 | 3 |
| gastrointestinal system | 7.44e-16 | 25 |
| hypodermis | 1.40e-10 | 5 |
| large intestine | 3.24e-10 | 11 |
Showing 1 to 6 of 6 entries
