FFCP PHASE2:Hg19::chr3:58522908..58522935,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8309 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:120 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=120 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q99424 | ||
|association_with_transcript=0bp_to_NM_003500,uc003dkl.2_5end | |association_with_transcript=0bp_to_NM_003500,uc003dkl.2_5end | ||
|cluster_id=chr3:58522908..58522935,- | |cluster_id=chr3:58522908..58522935,- | ||
Latest revision as of 05:46, 19 September 2015
| Short description: | p1@ACOX2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ACOX2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_NM_003500, uc003dkl.2_5end |
| EntrezGene: | ACOX2 |
| HGNC: | 120 |
| UniProt: | Q99424 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ACOX2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| muscle precursor cell | 6.34e-17 | 58 |
| myoblast | 6.34e-17 | 58 |
| multi-potent skeletal muscle stem cell | 6.34e-17 | 58 |
| muscle cell | 6.96e-16 | 55 |
| fibroblast | 3.34e-13 | 76 |
| smooth muscle cell | 8.30e-13 | 43 |
| smooth muscle myoblast | 8.30e-13 | 43 |
| electrically responsive cell | 1.78e-12 | 61 |
| electrically active cell | 1.78e-12 | 61 |
| vascular associated smooth muscle cell | 6.33e-09 | 32 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| muscle tissue | 3.29e-19 | 64 |
| musculature | 3.29e-19 | 64 |
| musculature of body | 3.29e-19 | 64 |
| dense mesenchyme tissue | 2.32e-18 | 73 |
| skeletal muscle tissue | 2.38e-18 | 62 |
| striated muscle tissue | 2.38e-18 | 62 |
| myotome | 2.38e-18 | 62 |
| paraxial mesoderm | 7.59e-18 | 72 |
| presumptive paraxial mesoderm | 7.59e-18 | 72 |
| somite | 1.20e-17 | 71 |
Showing 1 to 10 of 45 entries
