FFCP PHASE2:Hg19::chr10:86004624..86004637,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5995 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9990 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5995 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9990 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P47804,Q96HT6 | ||
|association_with_transcript=-171bp_to_ENST00000359452,ENST00000469446,ENST00000478727,NM_001012720,NM_001012722,NM_002921,uc001kdb.1,uc001kdc.1,uc001kdd.1,uc001kde.1_5end | |association_with_transcript=-171bp_to_ENST00000359452,ENST00000469446,ENST00000478727,NM_001012720,NM_001012722,NM_002921,uc001kdb.1,uc001kdc.1,uc001kdd.1,uc001kde.1_5end | ||
|cluster_id=chr10:86004624..86004637,+ | |cluster_id=chr10:86004624..86004637,+ | ||
Latest revision as of 16:55, 19 September 2015
| Short description: | p2@RGR |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_RGR_5end |
| Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
| Association with transcript: | -171bp_to_ENST00000359452, ENST00000469446, ENST00000478727, NM_001012720, NM_001012722, NM_002921, uc001kdb.1, uc001kdc.1, uc001kdd.1, uc001kde.1_5end |
| EntrezGene: | RGR |
| HGNC: | 9990 |
| UniProt: | P47804Q96HT6 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@RGR |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pineal body | 4.61e-131 | 2 |
| regional part of epithalamus | 4.61e-131 | 2 |
| secretory circumventricular organ | 4.61e-131 | 2 |
| circumventricular organ | 4.61e-131 | 2 |
| epithalamus | 4.61e-131 | 2 |
| gland of diencephalon | 2.40e-66 | 4 |
| neuroendocrine gland | 2.40e-66 | 4 |
| regional part of diencephalon | 2.40e-66 | 4 |
| diencephalon | 1.49e-38 | 7 |
| future diencephalon | 1.49e-38 | 7 |
Showing 1 to 10 of 16 entries
